Click here to switch to the map view.

The map label for this gene is yiaN [C]

Identifier: 92112521

GI number: 92112521

Start: 434388

End: 436562

Strand: Direct

Name: yiaN [C]

Synonym: Csal_0388

Alternate gene names: 92112521

Gene position: 434388-436562 (Clockwise)

Preceding gene: 92112520

Following gene: 92112522

Centisome position: 11.75

GC content: 65.1

Gene sequence:

>2175_bases
ATGTCCGATGAGAAATACGCGCAGGCCGCCGAAGGGGATGACAAGGCGGTCAAGGAAGCGCTGGAAAAGTTCGATCGCGA
GAGCCTGGTGCGCGATGCCTTGCCCGGTTTCGTGCTCAAGTTCGTCACCGTGGTGGCGGTGGTGCTGGCGGTGTTCCACC
TGTACACGTCGTTTTCCGGCCCGCTGGTCGACGTGGCGCAGCGCAGCATCCACCTCTACACCCTGCTGGGGCTGACGTTC
ATCCTCTATCCCTTGACCCGCAAGGGTGCGCGCGATCGTGTGCCGTGGGGTGACGCCATCCTCGCGGTGCTGGCGTTCGG
TGTCGGCGTCTACATGCTGGTGGTGTCCGAGCGCGTCATCGCCTCGGCGGGGCGGATCAACGACATCGACATGCTGGTGG
GCTTCTTGGCCATCCTGCTGGTGCTCGACGCCACCCGGCGTGCGACCGGCTGGGGGCTGACCCTGCTGGCGACGATCTTT
CTGGTGTATGGGTTCTACGCCAAGCTGTCGTTCTATCCGCAACTGAATGAAACGATCATCATGGCGACCGGCCGCCAGGT
GATGTCGCACCTGGTGTTCATCACCGAAGGCCTGCTGGGCACCGCCATCGGGGTGTCGGCCAGCTATATCATTCTGTTCA
TCCTGTTCGGCGCCTTCCTGGGCAAGTCGGGGCTGGGGCAGCTGTTCAATGACCTGGCGCTTGCCGTGGCAGGACATACC
CGCGGCGGGCCGGCCAAGGTGGCGGTCATCGCCAGCGGCTTTCTGGGGTCGATCAATGGTTCGGCGATCGCCAATGTCGT
GACCACCGGCGCGTTCACCATTCCGTTGATGAAGCGTACCGGCTACAAGCCGAATTTCGCGGGGGCCGTCGAGGCCTCGG
CCAGTGTCGGGGGGCAGATCCTGCCGCCGATCATGGGGGCGGCGGCCTTCATCATGGCGGAGGTGCTGTCGGTGCCCTAC
ACCCAGGTGATCCTGGCCGGCATCATCCCGGCGCTGCTCTTCTACCTCGGGGTCCTGTTCCAGGTGCATCTGCGCGCCCT
GCGCAACGGGCTGGAGGGCATTCCGCGTTCCGAACTGACGCCGCTCAAGGCCGTCATGCTCAAGCGGGGCCACCTGCTGG
TGCCGATGGTGGTACTGCTGTGGCTGCTCTTCGACGGTCGCGCCCCGTTCTTCGCGGCATTCTGGTCGATCGCCGCGACC
GTGCTGATCTGCGGGACGCGTCGTGTCACCCTGGGGGTCAGCGCGATTCTGGCGCTGCTGATCTTCGAGCCGCAATGGCG
CGCCTTGCTCGAGGGATATGCCCAGCCCGACATGACGGCGAGCCGCTGGGCATTGTTCGTGATCATCGCCGTGCCGGTGG
CGATCAATGCCTTGCGTGCCAAGCTCGGCCTGGTGGCGGAGAAAATGGACATCGCCGATTGCCGCGATGCGATGCACGAT
GGCGTGCGCAATGCCATTCCCGTGGCCGTGGCCTGCGGCGCGGTGGGCATCATCGTGGGGATCGCCACACTCACCGGCAT
CGCCCTGGAAGCCGCCGACGCGGTGGTGGCGCTGGGACAGCAGATTCCCATTCCGATGCTGCAGCTGCTGGTGACCCTGT
TCCTGACCATGATCGCGTCCATCGTGCTGGGCATGGGGCTGCCGAGCATCCCGACCTATATCATCACCAGCACCATGGCG
GCGCCGATCCTGCTCAACCTGCCGCTGTTCCGCGAGCTGGCGGGCAGCAACGAGACGGCGATCTTCGTGGCGCACATGTT
CGTGTTCTATTTCGGGCTGTTCGCCAATCTGACCCCGCCGGTGGCCCTGGCTGCCTATGCCGGTGCCGGCATCAGTGGCG
GCTCGCCCAATGCCACGGGCTTCCAGGCCATGAAGCTGGCCATCGCCGGGTTCGTGGTGCCCTACATGTTCGTGTTCGCG
CACAGCATGCTGATGATCGACGCCACGCTGGCCAACATCCTGTGGGTCGTCGTCACCGGTGTGGTCGGGGTATTGCTGCT
GGCCGTGGCGGTGGAGGGCTACCTGCGTCGTCCTCTCAATCCCTTCTGGCGCCTGCTGGCGGCGGCCGGGGCCTTGACGC
TGATCTACCCCGGCTTGATCAGCGACGTCATCGGTGCGGTCATCGCGCTGGGACTCTTCCTGCTGGCCAAGCAGGAAACG
CCCAAGGTGGCGTGA

Upstream 100 bases:

>100_bases
TGACGTTCAGCATTCTCAGGGCGCCCCTGTGGCAGGCATTGCCGGCCTTGGTACGTCCCTGGTTGTCGTAATCTCCCGCA
AGACGGGAACGAGGGTCATC

Downstream 100 bases:

>100_bases
TCGGGCAGGCAAGGGCGCCTTCGGGCGCCCTTGTTTTTTGATCTGTCGTTCGTTAAAAAGAACGAAACCGTTCTTTTTAA
TGGATGCCGCATGCCATCAC

Product: TRAP transporter, 4TM/12TM fusion protein

Products: NA

Alternate protein names: Trap Transporter 4tm/12tm Fusion Protein; TRAP Transporter; TRAP-Type Transport System Permease Protein; TRAP-Type Transport System Fused Permease Component; TRAP-Type Transport System Permease Component; TRAP-Type Transporter 4TM/12TM Fusion Protein; TRAP-Type Transporter Fused Permease Components; TRAP-T Family Transporter With Fused DctQ/DctM Subunits; TRAP-Type Transporter Permease Component; Inner Membrane Protein; TRAP-T Family Transporter Fused Inner Membrane Subunits; TRAP Transporter Transmembrane Protein; Permease; TRAP-Type Transport System Permease; TRAP Transporter Permease; Integral Membrane Protein; TRAP Transporter Large Permease; Trap Family Transporter; N-Carbamoyl-L-Amino Acid Hydrolase; TRAP-Type Transporter; TRAP Transport System Permease Component; TRAP Transporter 4TM/12TM Fusion Family; TRAP-Type Transport System Fused Permease Components; 4TM/12TM TRAP Transporter; TRAP-Type Transporter Fused Permeases; Trap Transporter; C4-Dicarboxylate Transporter; TRAP Transporter Membrane-Spanning Component; TRAP-Type Transport System; TRAP Type Transporter Protein

Number of amino acids: Translated: 724; Mature: 723

Protein sequence:

>724_residues
MSDEKYAQAAEGDDKAVKEALEKFDRESLVRDALPGFVLKFVTVVAVVLAVFHLYTSFSGPLVDVAQRSIHLYTLLGLTF
ILYPLTRKGARDRVPWGDAILAVLAFGVGVYMLVVSERVIASAGRINDIDMLVGFLAILLVLDATRRATGWGLTLLATIF
LVYGFYAKLSFYPQLNETIIMATGRQVMSHLVFITEGLLGTAIGVSASYIILFILFGAFLGKSGLGQLFNDLALAVAGHT
RGGPAKVAVIASGFLGSINGSAIANVVTTGAFTIPLMKRTGYKPNFAGAVEASASVGGQILPPIMGAAAFIMAEVLSVPY
TQVILAGIIPALLFYLGVLFQVHLRALRNGLEGIPRSELTPLKAVMLKRGHLLVPMVVLLWLLFDGRAPFFAAFWSIAAT
VLICGTRRVTLGVSAILALLIFEPQWRALLEGYAQPDMTASRWALFVIIAVPVAINALRAKLGLVAEKMDIADCRDAMHD
GVRNAIPVAVACGAVGIIVGIATLTGIALEAADAVVALGQQIPIPMLQLLVTLFLTMIASIVLGMGLPSIPTYIITSTMA
APILLNLPLFRELAGSNETAIFVAHMFVFYFGLFANLTPPVALAAYAGAGISGGSPNATGFQAMKLAIAGFVVPYMFVFA
HSMLMIDATLANILWVVVTGVVGVLLLAVAVEGYLRRPLNPFWRLLAAAGALTLIYPGLISDVIGAVIALGLFLLAKQET
PKVA

Sequences:

>Translated_724_residues
MSDEKYAQAAEGDDKAVKEALEKFDRESLVRDALPGFVLKFVTVVAVVLAVFHLYTSFSGPLVDVAQRSIHLYTLLGLTF
ILYPLTRKGARDRVPWGDAILAVLAFGVGVYMLVVSERVIASAGRINDIDMLVGFLAILLVLDATRRATGWGLTLLATIF
LVYGFYAKLSFYPQLNETIIMATGRQVMSHLVFITEGLLGTAIGVSASYIILFILFGAFLGKSGLGQLFNDLALAVAGHT
RGGPAKVAVIASGFLGSINGSAIANVVTTGAFTIPLMKRTGYKPNFAGAVEASASVGGQILPPIMGAAAFIMAEVLSVPY
TQVILAGIIPALLFYLGVLFQVHLRALRNGLEGIPRSELTPLKAVMLKRGHLLVPMVVLLWLLFDGRAPFFAAFWSIAAT
VLICGTRRVTLGVSAILALLIFEPQWRALLEGYAQPDMTASRWALFVIIAVPVAINALRAKLGLVAEKMDIADCRDAMHD
GVRNAIPVAVACGAVGIIVGIATLTGIALEAADAVVALGQQIPIPMLQLLVTLFLTMIASIVLGMGLPSIPTYIITSTMA
APILLNLPLFRELAGSNETAIFVAHMFVFYFGLFANLTPPVALAAYAGAGISGGSPNATGFQAMKLAIAGFVVPYMFVFA
HSMLMIDATLANILWVVVTGVVGVLLLAVAVEGYLRRPLNPFWRLLAAAGALTLIYPGLISDVIGAVIALGLFLLAKQET
PKVA
>Mature_723_residues
SDEKYAQAAEGDDKAVKEALEKFDRESLVRDALPGFVLKFVTVVAVVLAVFHLYTSFSGPLVDVAQRSIHLYTLLGLTFI
LYPLTRKGARDRVPWGDAILAVLAFGVGVYMLVVSERVIASAGRINDIDMLVGFLAILLVLDATRRATGWGLTLLATIFL
VYGFYAKLSFYPQLNETIIMATGRQVMSHLVFITEGLLGTAIGVSASYIILFILFGAFLGKSGLGQLFNDLALAVAGHTR
GGPAKVAVIASGFLGSINGSAIANVVTTGAFTIPLMKRTGYKPNFAGAVEASASVGGQILPPIMGAAAFIMAEVLSVPYT
QVILAGIIPALLFYLGVLFQVHLRALRNGLEGIPRSELTPLKAVMLKRGHLLVPMVVLLWLLFDGRAPFFAAFWSIAATV
LICGTRRVTLGVSAILALLIFEPQWRALLEGYAQPDMTASRWALFVIIAVPVAINALRAKLGLVAEKMDIADCRDAMHDG
VRNAIPVAVACGAVGIIVGIATLTGIALEAADAVVALGQQIPIPMLQLLVTLFLTMIASIVLGMGLPSIPTYIITSTMAA
PILLNLPLFRELAGSNETAIFVAHMFVFYFGLFANLTPPVALAAYAGAGISGGSPNATGFQAMKLAIAGFVVPYMFVFAH
SMLMIDATLANILWVVVTGVVGVLLLAVAVEGYLRRPLNPFWRLLAAAGALTLIYPGLISDVIGAVIALGLFLLAKQETP
KVA

Specific function: Unknown

COG id: COG4666

COG function: function code R; TRAP-type uncharacterized transport system, fused permease components

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76770; Mature: 76639

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDEKYAQAAEGDDKAVKEALEKFDRESLVRDALPGFVLKFVTVVAVVLAVFHLYTSFSG
CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PLVDVAQRSIHLYTLLGLTFILYPLTRKGARDRVPWGDAILAVLAFGVGVYMLVVSERVI
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ASAGRINDIDMLVGFLAILLVLDATRRATGWGLTLLATIFLVYGFYAKLSFYPQLNETII
HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
MATGRQVMSHLVFITEGLLGTAIGVSASYIILFILFGAFLGKSGLGQLFNDLALAVAGHT
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
RGGPAKVAVIASGFLGSINGSAIANVVTTGAFTIPLMKRTGYKPNFAGAVEASASVGGQI
CCCCCEEEEEECCCCCCCCCHHHHHHHHHCHHEEHHHHHCCCCCCCCCHHHCHHHCCCCC
LPPIMGAAAFIMAEVLSVPYTQVILAGIIPALLFYLGVLFQVHLRALRNGLEGIPRSELT
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PLKAVMLKRGHLLVPMVVLLWLLFDGRAPFFAAFWSIAATVLICGTRRVTLGVSAILALL
HHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
IFEPQWRALLEGYAQPDMTASRWALFVIIAVPVAINALRAKLGLVAEKMDIADCRDAMHD
HCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVRNAIPVAVACGAVGIIVGIATLTGIALEAADAVVALGQQIPIPMLQLLVTLFLTMIAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
IVLGMGLPSIPTYIITSTMAAPILLNLPLFRELAGSNETAIFVAHMFVFYFGLFANLTPP
HHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCH
VALAAYAGAGISGGSPNATGFQAMKLAIAGFVVPYMFVFAHSMLMIDATLANILWVVVTG
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVGVLLLAVAVEGYLRRPLNPFWRLLAAAGALTLIYPGLISDVIGAVIALGLFLLAKQET
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PKVA
CCCC
>Mature Secondary Structure 
SDEKYAQAAEGDDKAVKEALEKFDRESLVRDALPGFVLKFVTVVAVVLAVFHLYTSFSG
CCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PLVDVAQRSIHLYTLLGLTFILYPLTRKGARDRVPWGDAILAVLAFGVGVYMLVVSERVI
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ASAGRINDIDMLVGFLAILLVLDATRRATGWGLTLLATIFLVYGFYAKLSFYPQLNETII
HHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
MATGRQVMSHLVFITEGLLGTAIGVSASYIILFILFGAFLGKSGLGQLFNDLALAVAGHT
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
RGGPAKVAVIASGFLGSINGSAIANVVTTGAFTIPLMKRTGYKPNFAGAVEASASVGGQI
CCCCCEEEEEECCCCCCCCCHHHHHHHHHCHHEEHHHHHCCCCCCCCCHHHCHHHCCCCC
LPPIMGAAAFIMAEVLSVPYTQVILAGIIPALLFYLGVLFQVHLRALRNGLEGIPRSELT
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PLKAVMLKRGHLLVPMVVLLWLLFDGRAPFFAAFWSIAATVLICGTRRVTLGVSAILALL
HHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
IFEPQWRALLEGYAQPDMTASRWALFVIIAVPVAINALRAKLGLVAEKMDIADCRDAMHD
HCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVRNAIPVAVACGAVGIIVGIATLTGIALEAADAVVALGQQIPIPMLQLLVTLFLTMIAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
IVLGMGLPSIPTYIITSTMAAPILLNLPLFRELAGSNETAIFVAHMFVFYFGLFANLTPP
HHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCH
VALAAYAGAGISGGSPNATGFQAMKLAIAGFVVPYMFVFAHSMLMIDATLANILWVVVTG
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVGVLLLAVAVEGYLRRPLNPFWRLLAAAGALTLIYPGLISDVIGAVIALGLFLLAKQET
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PKVA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA