| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is bcsP31 [H]
Identifier: 92112519
GI number: 92112519
Start: 432681
End: 433808
Strand: Direct
Name: bcsP31 [H]
Synonym: Csal_0386
Alternate gene names: 92112519
Gene position: 432681-433808 (Clockwise)
Preceding gene: 92112518
Following gene: 92112520
Centisome position: 11.7
GC content: 64.98
Gene sequence:
>1128_bases ATGGCGACTCGTACTTTGATGCTGGCGGCCGCGCTGGGGCTGTCCGGTGCCTTGCTGGCCGGTTGCGGCGACGACAGCGG CGATGCCGACGAGACGACGCAGAACGGTGAGACGACCTCCCAGGAGCAGGCGTCCGAGGGGAATGGCGGCAACGGCGAGA GCGGCGAAGACGGCACGCAGACCGCAAGCGCCGATGCGGTCAGCCTGATCTTCGGCACCGGCGGTACCGGCGGCACCTAT TATCCCATCGGCGGCGCGCTCAAGAGCGTCTTCGAGGCCAGCGATCTGATCGATGATGTGCAGGTCGTCTCGACCGGGGC GTCCGTGCAGAACATCAACAACATCACCGACGGCCTCAATCAGGTCGCCATCGTGATGAGCGACGTCGCCTATGACGCCG TGAACGGCGAAAACCAGTTCGATGGGCAGCCGGCCGATATCCAGGCGCTGGCAGGGCTCTACCCCAACGTGGTACAGGTC GTGGCCACCGAGGATAGCGGCATCGAGAGCATCTCCGACCTCGCGGGCAAGCGCGTCGGTGTCGGCAAGGTCGGCTCCGG GGTCGAGCAAAGCGCGGCCAAGGTCATCGAGTCCGCCGGGCTCAGCTACGACGACCTGGCCCAGGTCAGCCACACCGGCT ATGCCGATAGCGTGACCGGCATGAGCAACGGCAACCTGGACGCGGCCTTCTTTACTTCCGGGGTGCCCAACTCGAGCATC ACCGGGCTGATGCAGAGCACCGATATCACCTTCGTGCCGGTCACCGGCGAGGTGGCGGACAAGCTGCTCGAGGCCTATCC GTACTACGAGACCTACACGTTGCCGGCGGGCGCTCCCGAGCGCTACGACCTCGATGCGGAAGTCGATACCGTGGCGATCC GCAACATGCTGATCGTCGGCAGCGACATGCGGGATGACGTCGCCGAGGAACTGACCGCGCGCTTCTACGACTATCTCAAT TCCGAGAACGTCTCCGTGGGCGCGCTCAAGCAGTTCGATCCCGAGACCATGAACCAGAACCTGGTGGCGCCGGTACATCC CGGGGCACAGGCGTTCTACGACACCCTCTCCGAAGACGATGCGTCGAGCGATGGCGAGGATGCGGACAGCGCCGGCACCG GGTCTTAA
Upstream 100 bases:
>100_bases GGCTGGGTGCTGACATGGTATCCATTCGTCGTGCCTCGTAAGCTAGGGAGTCGATATTTCAACGACCACGATTTCGTGGA CAACCAAGGGATGATTGGCT
Downstream 100 bases:
>100_bases CCTGCCCTCGTTCGGCGTATGGCCGTCTTGCAAGGCATGAGTGGCCATACGCATGAGACGTAAGACAGGCTGGATAGCAC TCGCCGTGGCGACCGTAATG
Product: TRAP transporter solute receptor TAXI family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MATRTLMLAAALGLSGALLAGCGDDSGDADETTQNGETTSQEQASEGNGGNGESGEDGTQTASADAVSLIFGTGGTGGTY YPIGGALKSVFEASDLIDDVQVVSTGASVQNINNITDGLNQVAIVMSDVAYDAVNGENQFDGQPADIQALAGLYPNVVQV VATEDSGIESISDLAGKRVGVGKVGSGVEQSAAKVIESAGLSYDDLAQVSHTGYADSVTGMSNGNLDAAFFTSGVPNSSI TGLMQSTDITFVPVTGEVADKLLEAYPYYETYTLPAGAPERYDLDAEVDTVAIRNMLIVGSDMRDDVAEELTARFYDYLN SENVSVGALKQFDPETMNQNLVAPVHPGAQAFYDTLSEDDASSDGEDADSAGTGS
Sequences:
>Translated_375_residues MATRTLMLAAALGLSGALLAGCGDDSGDADETTQNGETTSQEQASEGNGGNGESGEDGTQTASADAVSLIFGTGGTGGTY YPIGGALKSVFEASDLIDDVQVVSTGASVQNINNITDGLNQVAIVMSDVAYDAVNGENQFDGQPADIQALAGLYPNVVQV VATEDSGIESISDLAGKRVGVGKVGSGVEQSAAKVIESAGLSYDDLAQVSHTGYADSVTGMSNGNLDAAFFTSGVPNSSI TGLMQSTDITFVPVTGEVADKLLEAYPYYETYTLPAGAPERYDLDAEVDTVAIRNMLIVGSDMRDDVAEELTARFYDYLN SENVSVGALKQFDPETMNQNLVAPVHPGAQAFYDTLSEDDASSDGEDADSAGTGS >Mature_374_residues ATRTLMLAAALGLSGALLAGCGDDSGDADETTQNGETTSQEQASEGNGGNGESGEDGTQTASADAVSLIFGTGGTGGTYY PIGGALKSVFEASDLIDDVQVVSTGASVQNINNITDGLNQVAIVMSDVAYDAVNGENQFDGQPADIQALAGLYPNVVQVV ATEDSGIESISDLAGKRVGVGKVGSGVEQSAAKVIESAGLSYDDLAQVSHTGYADSVTGMSNGNLDAAFFTSGVPNSSIT GLMQSTDITFVPVTGEVADKLLEAYPYYETYTLPAGAPERYDLDAEVDTVAIRNMLIVGSDMRDDVAEELTARFYDYLNS ENVSVGALKQFDPETMNQNLVAPVHPGAQAFYDTLSEDDASSDGEDADSAGTGS
Specific function: Unknown
COG id: COG2358
COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015168 - InterPro: IPR011852 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 38514; Mature: 38383
Theoretical pI: Translated: 3.49; Mature: 3.49
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATRTLMLAAALGLSGALLAGCGDDSGDADETTQNGETTSQEQASEGNGGNGESGEDGTQ CCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC TASADAVSLIFGTGGTGGTYYPIGGALKSVFEASDLIDDVQVVSTGASVQNINNITDGLN CCCCCEEEEEEECCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH QVAIVMSDVAYDAVNGENQFDGQPADIQALAGLYPNVVQVVATEDSGIESISDLAGKRVG HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCCC VGKVGSGVEQSAAKVIESAGLSYDDLAQVSHTGYADSVTGMSNGNLDAAFFTSGVPNSSI CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCHH TGLMQSTDITFVPVTGEVADKLLEAYPYYETYTLPAGAPERYDLDAEVDTVAIRNMLIVG HHHEECCCEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHEEEEC SDMRDDVAEELTARFYDYLNSENVSVGALKQFDPETMNQNLVAPVHPGAQAFYDTLSEDD CCHHHHHHHHHHHHHHHHHCCCCCEECHHHHCCHHHHCCCCEECCCCCHHHHHHHHCCCC ASSDGEDADSAGTGS CCCCCCCCCCCCCCC >Mature Secondary Structure ATRTLMLAAALGLSGALLAGCGDDSGDADETTQNGETTSQEQASEGNGGNGESGEDGTQ CCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC TASADAVSLIFGTGGTGGTYYPIGGALKSVFEASDLIDDVQVVSTGASVQNINNITDGLN CCCCCEEEEEEECCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH QVAIVMSDVAYDAVNGENQFDGQPADIQALAGLYPNVVQVVATEDSGIESISDLAGKRVG HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCCC VGKVGSGVEQSAAKVIESAGLSYDDLAQVSHTGYADSVTGMSNGNLDAAFFTSGVPNSSI CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCHH TGLMQSTDITFVPVTGEVADKLLEAYPYYETYTLPAGAPERYDLDAEVDTVAIRNMLIVG HHHEECCCEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHHHHEEEEC SDMRDDVAEELTARFYDYLNSENVSVGALKQFDPETMNQNLVAPVHPGAQAFYDTLSEDD CCHHHHHHHHHHHHHHHHHCCCCCEECHHHHCCHHHHCCCCEECCCCCHHHHHHHHCCCC ASSDGEDADSAGTGS CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3133283 [H]