| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is pld1 [H]
Identifier: 92112502
GI number: 92112502
Start: 413003
End: 414001
Strand: Direct
Name: pld1 [H]
Synonym: Csal_0369
Alternate gene names: 92112502
Gene position: 413003-414001 (Clockwise)
Preceding gene: 92112501
Following gene: 92112508
Centisome position: 11.17
GC content: 66.07
Gene sequence:
>999_bases ATGACCGCATCGACCCTCTCGCGACACCTTCCCGCCAAGCTTCAGCGAGCCTTTGCAGGGCTGGGAGTCGGAACGGCACA GTTCGGTAACATGGGCCGGGTGACCCCCGAACGGGACTGCCTGGACGCCGTCGACACCGCCTGGGAGCTCGGGCTGCGCT TTTTCGATACGGCGCCTCACTACGGACTCGGGGTTTCCGAGCAGCGCCTGGGCAAGGCTCTGCGAGGACGATCTCCGGAG GACTACGTCATCTCGACCAAAGTGGGGCGTCTGCTGGCGCCCAATCCCTCGCCCCAGGGCAGTGACGAGGTCAATGGCTT CCATGTGGCCGACGAGCTGATGCGCGTGCGTGACTACACCGCCGAGGGGGTGAGACAGAGCCTGACGGCCTCGCTCGAGC GCCTCGGCATGACGTCCGTGGACATTCTCTGGATCCACGACCCCGAAGAGCCCTCGGACCGTTTCGAGGAAGCATTGGCG GGCGCGGTGCCTGAACTCGACCGATTGCGCGAGCAGGGGGTGATCTCGGCCTGGGGAGTGGGGTCCAAGGATGCCGCCAT GCTCAAGCGGTTCGTCGATCAGGCCTCGCTCGACCTGATCATGCTGGCGGGGCGCTACACCCTGCTGGAGCAGGAGCAGG TGGGACTGATGTCGACCTGTCTGGAACGCAACGTCGGCGTCGTAGCCGTAGGCGTGTTCAATTCGGGCCTGCTGGCGCGG GACGAGCCTCCCGCCGACGCCTGGTACGAGTATGGTCAGGCGCCCCAGTCCGTCATCGCGCGTGCCCGTGAGCTCGCTGC GGTAGCGCACGCCCACGCGGTCTCCCTGCCGGCGGCGGCACTGGCCTTCCCGTGGCGGCACCCTGCCGTGGTCAATGTCA TGGCCGGCATGCGCTCACCCGAGCAGGTGACGCGAAATCATGCACTGGCTTCGAGCAATATTCCCGATGCTTTCTGGGGG GAACTGAAGGCCCGAGGCCTGTTGGAGGAGACCTCATGA
Upstream 100 bases:
>100_bases GGACTGGTGTGATCGGGTACTCGCGCGCTTGCCCGCTGCTCAGCACTCCGCCGTCGCAGTGAACAACGCAATGAATGTCT ACCAGAGGAGGTAACGCACG
Downstream 100 bases:
>100_bases AGCTGTTGCGCTGCGCCCGGGATGTTTTAAGCAGTAATAGAGCGTGTCCGCACGAAGTCACAAAACCGCGAAGGCAAAGG CTCCGCGGTTTTGGCTACAG
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MTASTLSRHLPAKLQRAFAGLGVGTAQFGNMGRVTPERDCLDAVDTAWELGLRFFDTAPHYGLGVSEQRLGKALRGRSPE DYVISTKVGRLLAPNPSPQGSDEVNGFHVADELMRVRDYTAEGVRQSLTASLERLGMTSVDILWIHDPEEPSDRFEEALA GAVPELDRLREQGVISAWGVGSKDAAMLKRFVDQASLDLIMLAGRYTLLEQEQVGLMSTCLERNVGVVAVGVFNSGLLAR DEPPADAWYEYGQAPQSVIARARELAAVAHAHAVSLPAAALAFPWRHPAVVNVMAGMRSPEQVTRNHALASSNIPDAFWG ELKARGLLEETS
Sequences:
>Translated_332_residues MTASTLSRHLPAKLQRAFAGLGVGTAQFGNMGRVTPERDCLDAVDTAWELGLRFFDTAPHYGLGVSEQRLGKALRGRSPE DYVISTKVGRLLAPNPSPQGSDEVNGFHVADELMRVRDYTAEGVRQSLTASLERLGMTSVDILWIHDPEEPSDRFEEALA GAVPELDRLREQGVISAWGVGSKDAAMLKRFVDQASLDLIMLAGRYTLLEQEQVGLMSTCLERNVGVVAVGVFNSGLLAR DEPPADAWYEYGQAPQSVIARARELAAVAHAHAVSLPAAALAFPWRHPAVVNVMAGMRSPEQVTRNHALASSNIPDAFWG ELKARGLLEETS >Mature_331_residues TASTLSRHLPAKLQRAFAGLGVGTAQFGNMGRVTPERDCLDAVDTAWELGLRFFDTAPHYGLGVSEQRLGKALRGRSPED YVISTKVGRLLAPNPSPQGSDEVNGFHVADELMRVRDYTAEGVRQSLTASLERLGMTSVDILWIHDPEEPSDRFEEALAG AVPELDRLREQGVISAWGVGSKDAAMLKRFVDQASLDLIMLAGRYTLLEQEQVGLMSTCLERNVGVVAVGVFNSGLLARD EPPADAWYEYGQAPQSVIARARELAAVAHAHAVSLPAAALAFPWRHPAVVNVMAGMRSPEQVTRNHALASSNIPDAFWGE LKARGLLEETS
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase family [H]
Homologues:
Organism=Escherichia coli, GI1788070, Length=307, Percent_Identity=26.7100977198697, Blast_Score=103, Evalue=1e-23, Organism=Caenorhabditis elegans, GI212645785, Length=320, Percent_Identity=29.375, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI24646155, Length=297, Percent_Identity=27.6094276094276, Blast_Score=92, Evalue=6e-19, Organism=Drosophila melanogaster, GI24646159, Length=296, Percent_Identity=29.3918918918919, Blast_Score=89, Evalue=5e-18, Organism=Drosophila melanogaster, GI24646157, Length=233, Percent_Identity=26.6094420600858, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: =1.1.1.107 [H]
Molecular weight: Translated: 36009; Mature: 35878
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASTLSRHLPAKLQRAFAGLGVGTAQFGNMGRVTPERDCLDAVDTAWELGLRFFDTAPH CCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC YGLGVSEQRLGKALRGRSPEDYVISTKVGRLLAPNPSPQGSDEVNGFHVADELMRVRDYT CCCCCCHHHHHHHHHCCCCCCEEEECCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHH AEGVRQSLTASLERLGMTSVDILWIHDPEEPSDRFEEALAGAVPELDRLREQGVISAWGV HHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHCCCEEECCC GSKDAAMLKRFVDQASLDLIMLAGRYTLLEQEQVGLMSTCLERNVGVVAVGVFNSGLLAR CCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC DEPPADAWYEYGQAPQSVIARARELAAVAHAHAVSLPAAALAFPWRHPAVVNVMAGMRSP CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHCCCCH EQVTRNHALASSNIPDAFWGELKARGLLEETS HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure TASTLSRHLPAKLQRAFAGLGVGTAQFGNMGRVTPERDCLDAVDTAWELGLRFFDTAPH CHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC YGLGVSEQRLGKALRGRSPEDYVISTKVGRLLAPNPSPQGSDEVNGFHVADELMRVRDYT CCCCCCHHHHHHHHHCCCCCCEEEECCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHH AEGVRQSLTASLERLGMTSVDILWIHDPEEPSDRFEEALAGAVPELDRLREQGVISAWGV HHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHCCCEEECCC GSKDAAMLKRFVDQASLDLIMLAGRYTLLEQEQVGLMSTCLERNVGVVAVGVFNSGLLAR CCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC DEPPADAWYEYGQAPQSVIARARELAAVAHAHAVSLPAAALAFPWRHPAVVNVMAGMRSP CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHCCCCH EQVTRNHALASSNIPDAFWGELKARGLLEETS HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA