| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is 92112501
Identifier: 92112501
GI number: 92112501
Start: 412214
End: 412996
Strand: Direct
Name: 92112501
Synonym: Csal_0368
Alternate gene names: NA
Gene position: 412214-412996 (Clockwise)
Preceding gene: 92112500
Following gene: 92112502
Centisome position: 11.15
GC content: 64.11
Gene sequence:
>783_bases ATGATCGATACCCATCTCCATGTCTGGGATACCGCCGCGGTGCGAATCCCCTGGTTGAACGATGCGGGTCTGCCCGCCAA GGCGGTGATTCCCGACCGCCAGGACAGACGCTTCGTGCTGGTCGAAGCCGATGCCACCGACCCCGCCGAGGAGGCCGACT GGCTGATCGGTGTCGCTGACGCTACGCCCAGTGTCCACGGGGTCGTGGTCAGCGTCCCGCTGGAAAAGCCGCTGGTCTCG GAGTGGCTGGAGCGCGTCGCCGACATACCTCAAGTGGTCGGGGTCAGGCGCCTGCTGCAGGACCGTGATCTGTTCGATTC GATAGCCTTTCTCGACGGTTTGAAACGGCTGGCCGCCTGTGGACTGCCCTTCGATGCCTGCGTCAGGGATTACGAGTTGC CGCGCCTGCTGACACTGATCGAGCAGGTGCCGGAGTTGACGGTGGTGCTCGATCACATGGGCAAGCCCGATGTGCGCGAT GCGGCGGCTCGTGACCGATGGGCGCGTAACCTGGCGCGTCTTGCCGAGCGCGACGCGGTGTACTGCAAGCTCTCCGGACT GCCGGCTGAGTGCCGGGATGCCGACGAACTAGAATGCTGTGCTGCCGACATTCTCGACGTCGCTATTGGTACCTTCGGCG TCGAGCGTTGCCTGATCGGCAGCGACCACCCCGTCAGCCAGGACCCCTCGGACTGGTGTGATCGGGTACTCGCGCGCTTG CCCGCTGCTCAGCACTCCGCCGTCGCAGTGAACAACGCAATGAATGTCTACCAGAGGAGGTAA
Upstream 100 bases:
>100_bases CATTCTACGACGCCTGCCGTGCGCCGGACGTGTGCTTGCTGATCGCCACCGGCGAGCGCCGCCCCTACTCCAACTTCCTG CTGACGATAGGCGTGCCCTG
Downstream 100 bases:
>100_bases CGCACGATGACCGCATCGACCCTCTCGCGACACCTTCCCGCCAAGCTTCAGCGAGCCTTTGCAGGGCTGGGAGTCGGAAC GGCACAGTTCGGTAACATGG
Product: amidohydrolase 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MIDTHLHVWDTAAVRIPWLNDAGLPAKAVIPDRQDRRFVLVEADATDPAEEADWLIGVADATPSVHGVVVSVPLEKPLVS EWLERVADIPQVVGVRRLLQDRDLFDSIAFLDGLKRLAACGLPFDACVRDYELPRLLTLIEQVPELTVVLDHMGKPDVRD AAARDRWARNLARLAERDAVYCKLSGLPAECRDADELECCAADILDVAIGTFGVERCLIGSDHPVSQDPSDWCDRVLARL PAAQHSAVAVNNAMNVYQRR
Sequences:
>Translated_260_residues MIDTHLHVWDTAAVRIPWLNDAGLPAKAVIPDRQDRRFVLVEADATDPAEEADWLIGVADATPSVHGVVVSVPLEKPLVS EWLERVADIPQVVGVRRLLQDRDLFDSIAFLDGLKRLAACGLPFDACVRDYELPRLLTLIEQVPELTVVLDHMGKPDVRD AAARDRWARNLARLAERDAVYCKLSGLPAECRDADELECCAADILDVAIGTFGVERCLIGSDHPVSQDPSDWCDRVLARL PAAQHSAVAVNNAMNVYQRR >Mature_260_residues MIDTHLHVWDTAAVRIPWLNDAGLPAKAVIPDRQDRRFVLVEADATDPAEEADWLIGVADATPSVHGVVVSVPLEKPLVS EWLERVADIPQVVGVRRLLQDRDLFDSIAFLDGLKRLAACGLPFDACVRDYELPRLLTLIEQVPELTVVLDHMGKPDVRD AAARDRWARNLARLAERDAVYCKLSGLPAECRDADELECCAADILDVAIGTFGVERCLIGSDHPVSQDPSDWCDRVLARL PAAQHSAVAVNNAMNVYQRR
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006992 [H]
Pfam domain/function: PF04909 Amidohydro_2 [H]
EC number: NA
Molecular weight: Translated: 28739; Mature: 28739
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDTHLHVWDTAAVRIPWLNDAGLPAKAVIPDRQDRRFVLVEADATDPAEEADWLIGVAD CCCCEEEEECCCEEEECCCCCCCCCCEECCCCCCCCEEEEEECCCCCCCCCCCEEEEECC ATPSVHGVVVSVPLEKPLVSEWLERVADIPQVVGVRRLLQDRDLFDSIAFLDGLKRLAAC CCCCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLPFDACVRDYELPRLLTLIEQVPELTVVLDHMGKPDVRDAAARDRWARNLARLAERDAV CCCHHHHHHHCCHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCE YCKLSGLPAECRDADELECCAADILDVAIGTFGVERCLIGSDHPVSQDPSDWCDRVLARL EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHC PAAQHSAVAVNNAMNVYQRR CCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MIDTHLHVWDTAAVRIPWLNDAGLPAKAVIPDRQDRRFVLVEADATDPAEEADWLIGVAD CCCCEEEEECCCEEEECCCCCCCCCCEECCCCCCCCEEEEEECCCCCCCCCCCEEEEECC ATPSVHGVVVSVPLEKPLVSEWLERVADIPQVVGVRRLLQDRDLFDSIAFLDGLKRLAAC CCCCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLPFDACVRDYELPRLLTLIEQVPELTVVLDHMGKPDVRDAAARDRWARNLARLAERDAV CCCHHHHHHHCCHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCE YCKLSGLPAECRDADELECCAADILDVAIGTFGVERCLIGSDHPVSQDPSDWCDRVLARL EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHC PAAQHSAVAVNNAMNVYQRR CCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]