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The map label for this gene is ygbF [H]

Identifier: 92112368

GI number: 92112368

Start: 264261

End: 264557

Strand: Direct

Name: ygbF [H]

Synonym: Csal_0233

Alternate gene names: 92112368

Gene position: 264261-264557 (Clockwise)

Preceding gene: 92112367

Following gene: 92112377

Centisome position: 7.15

GC content: 54.88

Gene sequence:

>297_bases
ATGGCAATGCTGGTGGTCGTTACCGAAGCCGTACCTCCCAGACTTAGAGGCCGTTTGGCTGTGTGGTTGCTGGAAATCCG
AGCGGGGGTTTACGTCGGCGATGTCAGTAAACGCATTCGCGAAATGATCTGGGAACAGATCGAAGTCCTGGCCGAGGAAG
GCGGCAACGTTGCCATGGCCTGGGCCAGCAATCACGAATCCGGCTTCGAGTTCCAAACTTATGGCGACAACCGTCGTGTC
CCCATCGATCATGATGGATTGAGGCTGGTGCGGTTTTTACCACCTCAAGGTAATTGA

Upstream 100 bases:

>100_bases
GCTGGAGAAATCGAGCCTCCACCTCCGCCGCCGGATGCGGTCCCACCGGCGATCCCGGAGCCTGAATCCGTCGGCGATGC
AGGGCATCGGAGTCAATGAT

Downstream 100 bases:

>100_bases
CTGATTTTAAAGGCTCTTTAATAATTTGGGGCGATTAAATTTTAAGCAAAATCGCTGGTGGAAATTTCCCTGGCGATTTT
GTTCTTTATAAACAAGTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MAMLVVVTEAVPPRLRGRLAVWLLEIRAGVYVGDVSKRIREMIWEQIEVLAEEGGNVAMAWASNHESGFEFQTYGDNRRV
PIDHDGLRLVRFLPPQGN

Sequences:

>Translated_98_residues
MAMLVVVTEAVPPRLRGRLAVWLLEIRAGVYVGDVSKRIREMIWEQIEVLAEEGGNVAMAWASNHESGFEFQTYGDNRRV
PIDHDGLRLVRFLPPQGN
>Mature_97_residues
AMLVVVTEAVPPRLRGRLAVWLLEIRAGVYVGDVSKRIREMIWEQIEVLAEEGGNVAMAWASNHESGFEFQTYGDNRRVP
IDHDGLRLVRFLPPQGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082153, Length=94, Percent_Identity=79.7872340425532, Blast_Score=153, Evalue=3e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010152 [H]

Pfam domain/function: PF09707 Cas_Cas2CT1978 [H]

EC number: NA

Molecular weight: Translated: 11102; Mature: 10971

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMLVVVTEAVPPRLRGRLAVWLLEIRAGVYVGDVSKRIREMIWEQIEVLAEEGGNVAMA
CEEEEEEECCCCCCHHHHHHHHEEEHHCCEEECHHHHHHHHHHHHHHHHHHHCCCCEEEE
WASNHESGFEFQTYGDNRRVPIDHDGLRLVRFLPPQGN
EECCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure 
AMLVVVTEAVPPRLRGRLAVWLLEIRAGVYVGDVSKRIREMIWEQIEVLAEEGGNVAMA
EEEEEEECCCCCCHHHHHHHHEEEHHCCEEECHHHHHHHHHHHHHHHHHHHCCCCEEEE
WASNHESGFEFQTYGDNRRVPIDHDGLRLVRFLPPQGN
EECCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2656660; 9278503; 7567469 [H]