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The map label for this gene is ylbA [H]

Identifier: 92112214

GI number: 92112214

Start: 99140

End: 99988

Strand: Direct

Name: ylbA [H]

Synonym: Csal_0079

Alternate gene names: 92112214

Gene position: 99140-99988 (Clockwise)

Preceding gene: 92112213

Following gene: 92112215

Centisome position: 2.68

GC content: 64.66

Gene sequence:

>849_bases
ATGTCACAACGCAGCCACGACGCACCTGAAAGAACCTACTACGCCCCCCATGGCGGTTTGCCGCCGCAGAGCCAGTTGAT
TCATGGTCGCGCGGTCTTCACCGAGGCCTATGCGGTGATTCCCAAGGGGGTGATGAGCGATATCGTCACCAGTTTCCTGC
CGCACTGGGAGAAGACCCGGCTGTGGGTGCTGTCGCGGCCGCTTTCCGGCTTCGCGGAGACGTTTTCGCAGTACATCATG
GAGGTCTCGCCCGGTGGCGGCAGCGAGCGGCCGGAGCCGGACGAAGGCGCCGAGGGCGTGCTGTTCGTGGTCGAGGGCGA
GATGACGCTGACCATCGCGGGGGAAGCGCACGCGATGGGACCGGGAGGCTATGCCTATCTGCCGCCGGGCTGCGACTGGC
AGCTGCGCAACGGCAGCGACGCGCCGGTGCGCTTCCACTGGATACGCAAGGCCTACGAGTTCGTCGAGGGGCTGGCAGTG
CCCGAAGCCTTCGTCACCAGCGACAACGACATCGCGCCGATTGCCATGCCGGATACCGACGGCCGCTGGGCCACGACACG
CTTCGTCGATCCCCAGGACGTGCGCCACGACATGCACGTCAACATCGTTACCTTCCAGCCCGGGGGCGTGATCCCGTTCG
ATGAAACCCATGTCATGGAGCATGGGCTCTACGTGCTGGAGGGCCGTGCGATCTACCACCTCAATCAGGATTGGGTCGAG
GTCGAGGCCGGCGACTACATGTGGCTGCGGGCCTTCTGTCCGCAATCCTGCTACGCCGCCGGGCCGGGGCCGTTTCGCTA
TCTGCTCTACAAGGATGTGAACCGGCACATGAAGCTGCGCTTGAGCTGA

Upstream 100 bases:

>100_bases
ATCACCTCGAGACCCATGACCGGGTGTGGATAACCCGGCGTGTGGATATCGCGCGTCACTGGGCGGCAACGCACCCGGCT
TGAAAAGCGAGGAACCTCTC

Downstream 100 bases:

>100_bases
GACAATCCTCCGAGGAGAACGCATGCTCGAACTTACCGCCCAGCCCCTGACTGCCGAAGCCTTCGCGCCGTTCGGCGATG
TCATCGACCGCCGGGACGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MSQRSHDAPERTYYAPHGGLPPQSQLIHGRAVFTEAYAVIPKGVMSDIVTSFLPHWEKTRLWVLSRPLSGFAETFSQYIM
EVSPGGGSERPEPDEGAEGVLFVVEGEMTLTIAGEAHAMGPGGYAYLPPGCDWQLRNGSDAPVRFHWIRKAYEFVEGLAV
PEAFVTSDNDIAPIAMPDTDGRWATTRFVDPQDVRHDMHVNIVTFQPGGVIPFDETHVMEHGLYVLEGRAIYHLNQDWVE
VEAGDYMWLRAFCPQSCYAAGPGPFRYLLYKDVNRHMKLRLS

Sequences:

>Translated_282_residues
MSQRSHDAPERTYYAPHGGLPPQSQLIHGRAVFTEAYAVIPKGVMSDIVTSFLPHWEKTRLWVLSRPLSGFAETFSQYIM
EVSPGGGSERPEPDEGAEGVLFVVEGEMTLTIAGEAHAMGPGGYAYLPPGCDWQLRNGSDAPVRFHWIRKAYEFVEGLAV
PEAFVTSDNDIAPIAMPDTDGRWATTRFVDPQDVRHDMHVNIVTFQPGGVIPFDETHVMEHGLYVLEGRAIYHLNQDWVE
VEAGDYMWLRAFCPQSCYAAGPGPFRYLLYKDVNRHMKLRLS
>Mature_281_residues
SQRSHDAPERTYYAPHGGLPPQSQLIHGRAVFTEAYAVIPKGVMSDIVTSFLPHWEKTRLWVLSRPLSGFAETFSQYIME
VSPGGGSERPEPDEGAEGVLFVVEGEMTLTIAGEAHAMGPGGYAYLPPGCDWQLRNGSDAPVRFHWIRKAYEFVEGLAVP
EAFVTSDNDIAPIAMPDTDGRWATTRFVDPQDVRHDMHVNIVTFQPGGVIPFDETHVMEHGLYVLEGRAIYHLNQDWVEV
EAGDYMWLRAFCPQSCYAAGPGPFRYLLYKDVNRHMKLRLS

Specific function: Unknown

COG id: COG3257

COG function: function code R; Uncharacterized protein, possibly involved in glyoxylate utilization

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786725, Length=260, Percent_Identity=29.6153846153846, Blast_Score=110, Evalue=9e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017627
- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR008579
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2; PF05899 Cupin_3 [H]

EC number: NA

Molecular weight: Translated: 31627; Mature: 31496

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQRSHDAPERTYYAPHGGLPPQSQLIHGRAVFTEAYAVIPKGVMSDIVTSFLPHWEKTR
CCCCCCCCCCCEEECCCCCCCCHHHEEECHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCE
LWVLSRPLSGFAETFSQYIMEVSPGGGSERPEPDEGAEGVLFVVEGEMTLTIAGEAHAMG
EEEEECCHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCEEEEEEECCEEEEEECCCEECC
PGGYAYLPPGCDWQLRNGSDAPVRFHWIRKAYEFVEGLAVPEAFVTSDNDIAPIAMPDTD
CCCEEECCCCCCEEECCCCCCCEEHHHHHHHHHHHHHCCCCHHEECCCCCEEEEEECCCC
GRWATTRFVDPQDVRHDMHVNIVTFQPGGVIPFDETHVMEHGLYVLEGRAIYHLNQDWVE
CCEEEEECCCHHHHCCCEEEEEEEECCCCCCCCCCHHHHHCCEEEEECEEEEEECCCEEE
VEAGDYMWLRAFCPQSCYAAGPGPFRYLLYKDVNRHMKLRLS
EECCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEEEEC
>Mature Secondary Structure 
SQRSHDAPERTYYAPHGGLPPQSQLIHGRAVFTEAYAVIPKGVMSDIVTSFLPHWEKTR
CCCCCCCCCCEEECCCCCCCCHHHEEECHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCE
LWVLSRPLSGFAETFSQYIMEVSPGGGSERPEPDEGAEGVLFVVEGEMTLTIAGEAHAMG
EEEEECCHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCEEEEEEECCEEEEEECCCEECC
PGGYAYLPPGCDWQLRNGSDAPVRFHWIRKAYEFVEGLAVPEAFVTSDNDIAPIAMPDTD
CCCEEECCCCCCEEECCCCCCCEEHHHHHHHHHHHHHCCCCHHEECCCCCEEEEEECCCC
GRWATTRFVDPQDVRHDMHVNIVTFQPGGVIPFDETHVMEHGLYVLEGRAIYHLNQDWVE
CCEEEEECCCHHHHCCCEEEEEEEECCCCCCCCCCHHHHHCCEEEEECEEEEEECCCEEE
VEAGDYMWLRAFCPQSCYAAGPGPFRYLLYKDVNRHMKLRLS
EECCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10601204; 9278503 [H]