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The map label for this gene is 92112213

Identifier: 92112213

GI number: 92112213

Start: 98181

End: 99122

Strand: Direct

Name: 92112213

Synonym: Csal_0078

Alternate gene names: NA

Gene position: 98181-99122 (Clockwise)

Preceding gene: 92112209

Following gene: 92112214

Centisome position: 2.66

GC content: 65.39

Gene sequence:

>942_bases
ATGGGCATGGCATCCTCCACCGATCCGTCCGAGGTTTACCCACGCGATCTCGTCGGCTATGGCCGCACGCCACCGCAAGC
GAACTGGCCGGGCCAGGCCCGCGTCGCCGTGCAGTTCGTCCTCAACTACGAAGAGGGTGGCGAGAACAGCGTGCTGCACG
GCGATAGCCACTCCGAACAGTTTCTCTCCGAGATCGCCGGGGCCGAGGCCTATCCCGACCGCCACCTGAGCATGGAGTCG
ATCTACGAATACGGTTCGCGGGCGGGGGTGTGGCGCGTGCTGCGCGAGTTCGAGCGCCGCGGGTTGCCGTTGACGGTATT
CGGCGTTGCCATGGCGCTGGAGCGTCATCCCGAGGTGGCCCAGGCCTTCCAGGAACTGGGCCACGAGATCGCCTGCCATG
GCTGGCGCTGGATTCACTACCAGAACGTGCCGGAAGCACTCGAACGCGACCACATGCAGCGTGCCATCGAGGTGTTCCGC
CGCTTGTACGGCGAGGCGCCCCTGGGGTGGTACACCGGTCGCGACAGCCCCAATACACGGCGGCTGTTGCTCGATCAGGG
CGGCTTCCTCTACGACAGCGACTACTACGGTGACGATCTGCCGTTCTGGAGCGACGTCCAGGACAGTCAGGGCCAGACGC
ACCGCCACCTGATCGTGCCCTACACGCTGGATACCAACGACATGCGCTTCGCCTCGCCCACCGGCTTCGACCACGGCGAG
CCCTTCTTCCAGTACCTGCGCGATGCCTTCGACGTGCTCTACGCAGAAGGCGCGGAAACACCGAAGATGCTCTCCATTGG
TCTGCATTGCCGACTGATCGGCCGCCCCGGACGCTTCCGCGCGCTGCAGCGCTTCCTCGATCACCTCGAGACCCATGACC
GGGTGTGGATAACCCGGCGTGTGGATATCGCGCGTCACTGGGCGGCAACGCACCCGGCTTGA

Upstream 100 bases:

>100_bases
GTCGAGGCACCGGCAAGGGCGCGACGAGGGATTGATTTTTTGTATACATCAACGCACGCTAAGGTAATCCGAGCGGCACA
ACAATAAACCGGGAGTCTTC

Downstream 100 bases:

>100_bases
AAAGCGAGGAACCTCTCATGTCACAACGCAGCCACGACGCACCTGAAAGAACCTACTACGCCCCCCATGGCGGTTTGCCG
CCGCAGAGCCAGTTGATTCA

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: Urate Catabolism Protein; Polysaccharide Deacetylase Family Protein; Chitin Deacetylase; Xylanase/Chitin Deacetylase; Chitooligosaccharide Deacetylase; Polysaccharide Deacetylase Domain Protein; Polysaccharide Deacetylase Family; Hydrolase; Chitooligosaccharide Deacetylase Protein; Uricase; Polysaccharide Deacetylase Protein Pda4B; Carbohydrate Esterase Family 4 Domain Protein; Chitinase; Deacetylase Protein; Polysaccharide Deacetylase Domain-Containing Protein; Allantoinase; Deacetylase

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MGMASSTDPSEVYPRDLVGYGRTPPQANWPGQARVAVQFVLNYEEGGENSVLHGDSHSEQFLSEIAGAEAYPDRHLSMES
IYEYGSRAGVWRVLREFERRGLPLTVFGVAMALERHPEVAQAFQELGHEIACHGWRWIHYQNVPEALERDHMQRAIEVFR
RLYGEAPLGWYTGRDSPNTRRLLLDQGGFLYDSDYYGDDLPFWSDVQDSQGQTHRHLIVPYTLDTNDMRFASPTGFDHGE
PFFQYLRDAFDVLYAEGAETPKMLSIGLHCRLIGRPGRFRALQRFLDHLETHDRVWITRRVDIARHWAATHPA

Sequences:

>Translated_313_residues
MGMASSTDPSEVYPRDLVGYGRTPPQANWPGQARVAVQFVLNYEEGGENSVLHGDSHSEQFLSEIAGAEAYPDRHLSMES
IYEYGSRAGVWRVLREFERRGLPLTVFGVAMALERHPEVAQAFQELGHEIACHGWRWIHYQNVPEALERDHMQRAIEVFR
RLYGEAPLGWYTGRDSPNTRRLLLDQGGFLYDSDYYGDDLPFWSDVQDSQGQTHRHLIVPYTLDTNDMRFASPTGFDHGE
PFFQYLRDAFDVLYAEGAETPKMLSIGLHCRLIGRPGRFRALQRFLDHLETHDRVWITRRVDIARHWAATHPA
>Mature_312_residues
GMASSTDPSEVYPRDLVGYGRTPPQANWPGQARVAVQFVLNYEEGGENSVLHGDSHSEQFLSEIAGAEAYPDRHLSMESI
YEYGSRAGVWRVLREFERRGLPLTVFGVAMALERHPEVAQAFQELGHEIACHGWRWIHYQNVPEALERDHMQRAIEVFRR
LYGEAPLGWYTGRDSPNTRRLLLDQGGFLYDSDYYGDDLPFWSDVQDSQGQTHRHLIVPYTLDTNDMRFASPTGFDHGEP
FFQYLRDAFDVLYAEGAETPKMLSIGLHCRLIGRPGRFRALQRFLDHLETHDRVWITRRVDIARHWAATHPA

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36019; Mature: 35887

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMASSTDPSEVYPRDLVGYGRTPPQANWPGQARVAVQFVLNYEEGGENSVLHGDSHSEQ
CCCCCCCCCHHCCCHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECCCHHHH
FLSEIAGAEAYPDRHLSMESIYEYGSRAGVWRVLREFERRGLPLTVFGVAMALERHPEVA
HHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCEEHHHHHHHHHCCHHHH
QAFQELGHEIACHGWRWIHYQNVPEALERDHMQRAIEVFRRLYGEAPLGWYTGRDSPNTR
HHHHHHCHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCC
RLLLDQGGFLYDSDYYGDDLPFWSDVQDSQGQTHRHLIVPYTLDTNDMRFASPTGFDHGE
EEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEECCCCCCCCCC
PFFQYLRDAFDVLYAEGAETPKMLSIGLHCRLIGRPGRFRALQRFLDHLETHDRVWITRR
HHHHHHHHHHHHHHHCCCCCCCEEEECEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEE
VDIARHWAATHPA
HHHHHHHHCCCCC
>Mature Secondary Structure 
GMASSTDPSEVYPRDLVGYGRTPPQANWPGQARVAVQFVLNYEEGGENSVLHGDSHSEQ
CCCCCCCCHHCCCHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECCCHHHH
FLSEIAGAEAYPDRHLSMESIYEYGSRAGVWRVLREFERRGLPLTVFGVAMALERHPEVA
HHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCEEHHHHHHHHHCCHHHH
QAFQELGHEIACHGWRWIHYQNVPEALERDHMQRAIEVFRRLYGEAPLGWYTGRDSPNTR
HHHHHHCHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCC
RLLLDQGGFLYDSDYYGDDLPFWSDVQDSQGQTHRHLIVPYTLDTNDMRFASPTGFDHGE
EEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEECCCCCCCCCC
PFFQYLRDAFDVLYAEGAETPKMLSIGLHCRLIGRPGRFRALQRFLDHLETHDRVWITRR
HHHHHHHHHHHHHHHCCCCCCCEEEECEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEE
VDIARHWAATHPA
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA