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The map label for this gene is fimZ [C]

Identifier: 92112197

GI number: 92112197

Start: 81378

End: 82205

Strand: Direct

Name: fimZ [C]

Synonym: Csal_0062

Alternate gene names: 92112197

Gene position: 81378-82205 (Clockwise)

Preceding gene: 92112194

Following gene: 92112199

Centisome position: 2.2

GC content: 67.63

Gene sequence:

>828_bases
ATGACAAGCGAGCCGCAGCCGGCAACGTCCGCCCCCGGCCAGACCAGCCTGGAGAGCCTGGCCTGGCATCGTGCCTTCGG
CGGGTTGGCCGCGTCGCTGGATGCCCCCGATTTCTGGCTGGCGGCGGTCCGCACGATCGGCGCGCACCTTGCCTTCGATA
CCTGGGTGGCGTTGATCTTCCACCATCATCGGCCGCCCCGGATCCTCGCCGAAAGCGACGAGGACGATGGCGCCGACGAG
GCGCTCTTCCAGGACTACCAGCGTGGCCTGTACCTGCTCGACCCGTTCTACATCGACGCCAAGGGGCGTGCCCGCGAGGG
GCTCTACACCCTGGCCGACGTGGCGCCGCAGCGCTTCCGCCACACCGAGTACTATCAGCGCTATTTCCAGCGCAACATCG
TCGCCGACGAGGTGCAGTTCAACTGCCCGCTCGACGCCGAGCGGACGTTGTGCCTCTCGCTGGGTTCGACCCGGGCCTTC
GATCATGCCGCGCTGGGGCTGTTGAGCCTCATCCAGCCCTGGATGCTGGCGTTGATGCGCCAGCGCATGCATTTCGAGTT
CGAGGGCGAGGACGGCACGCCGCCGGGGCCGCATCCCTGGCATCCCCGTCCCGGCACGCCGCGCGAGCTGGATTCACGCT
ACGCACTGACCGAGCGGGAGCGCGAGGTCAGCCAGCTCATGCTGGGCGGCAGCTCGACCAAGGAGATCGCCCGACGGCTG
GCGATCTCGGTGGAAACCGTACGCGCCCACAAGAAACATCTCTACGCCAAGCTGGGCATCAACTCGCAGTCGGAGCTGTT
CTCGCTGTTCTGGCAGGCGCGCCCCTAG

Upstream 100 bases:

>100_bases
CCCCTGCGGGGGGAGCGAGGAGCGTTGTGAAGAGCATGGCCGGTAGCGTGCCGAACAGAGGGCCGAAGAGCATGCCTGGA
AGAGCGCCGAGGAGAGCGAC

Downstream 100 bases:

>100_bases
GCCTGGCAGAACAACCGTTTGCGCTCGGCCCGGGGCGCTCGGGCCTACAACGTGCGGTCGTCGACGCCGAAGGTCGGCGG
CACGAACCAGCGCACGTCCT

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator LuxR Family; Transcriptional Regulator LuxR Family Protein; Response Regulator Receiver Protein; Transcriptional Regulator; LuxR Superfamily Regulatory Protein; Regulatory Protein LuxR; Transcriptional Regulatory Protein; GerE Familyregulatory Protein

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MTSEPQPATSAPGQTSLESLAWHRAFGGLAASLDAPDFWLAAVRTIGAHLAFDTWVALIFHHHRPPRILAESDEDDGADE
ALFQDYQRGLYLLDPFYIDAKGRAREGLYTLADVAPQRFRHTEYYQRYFQRNIVADEVQFNCPLDAERTLCLSLGSTRAF
DHAALGLLSLIQPWMLALMRQRMHFEFEGEDGTPPGPHPWHPRPGTPRELDSRYALTEREREVSQLMLGGSSTKEIARRL
AISVETVRAHKKHLYAKLGINSQSELFSLFWQARP

Sequences:

>Translated_275_residues
MTSEPQPATSAPGQTSLESLAWHRAFGGLAASLDAPDFWLAAVRTIGAHLAFDTWVALIFHHHRPPRILAESDEDDGADE
ALFQDYQRGLYLLDPFYIDAKGRAREGLYTLADVAPQRFRHTEYYQRYFQRNIVADEVQFNCPLDAERTLCLSLGSTRAF
DHAALGLLSLIQPWMLALMRQRMHFEFEGEDGTPPGPHPWHPRPGTPRELDSRYALTEREREVSQLMLGGSSTKEIARRL
AISVETVRAHKKHLYAKLGINSQSELFSLFWQARP
>Mature_274_residues
TSEPQPATSAPGQTSLESLAWHRAFGGLAASLDAPDFWLAAVRTIGAHLAFDTWVALIFHHHRPPRILAESDEDDGADEA
LFQDYQRGLYLLDPFYIDAKGRAREGLYTLADVAPQRFRHTEYYQRYFQRNIVADEVQFNCPLDAERTLCLSLGSTRAFD
HAALGLLSLIQPWMLALMRQRMHFEFEGEDGTPPGPHPWHPRPGTPRELDSRYALTEREREVSQLMLGGSSTKEIARRLA
ISVETVRAHKKHLYAKLGINSQSELFSLFWQARP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31228; Mature: 31096

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSEPQPATSAPGQTSLESLAWHRAFGGLAASLDAPDFWLAAVRTIGAHLAFDTWVALIF
CCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
HHHRPPRILAESDEDDGADEALFQDYQRGLYLLDPFYIDAKGRAREGLYTLADVAPQRFR
HCCCCCCEECCCCCCCCHHHHHHHHHHCCEEEECCEEECCCCCCHHHHHHHHHHHHHHHH
HTEYYQRYFQRNIVADEVQFNCPLDAERTLCLSLGSTRAFDHAALGLLSLIQPWMLALMR
HHHHHHHHHHHCCCHHCEEECCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
QRMHFEFEGEDGTPPGPHPWHPRPGTPRELDSRYALTEREREVSQLMLGGSSTKEIARRL
HHHCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
AISVETVRAHKKHLYAKLGINSQSELFSLFWQARP
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
TSEPQPATSAPGQTSLESLAWHRAFGGLAASLDAPDFWLAAVRTIGAHLAFDTWVALIF
CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
HHHRPPRILAESDEDDGADEALFQDYQRGLYLLDPFYIDAKGRAREGLYTLADVAPQRFR
HCCCCCCEECCCCCCCCHHHHHHHHHHCCEEEECCEEECCCCCCHHHHHHHHHHHHHHHH
HTEYYQRYFQRNIVADEVQFNCPLDAERTLCLSLGSTRAFDHAALGLLSLIQPWMLALMR
HHHHHHHHHHHCCCHHCEEECCCCCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
QRMHFEFEGEDGTPPGPHPWHPRPGTPRELDSRYALTEREREVSQLMLGGSSTKEIARRL
HHHCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
AISVETVRAHKKHLYAKLGINSQSELFSLFWQARP
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA