| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is yhxC [H]
Identifier: 92112199
GI number: 92112199
Start: 83464
End: 84318
Strand: Direct
Name: yhxC [H]
Synonym: Csal_0064
Alternate gene names: 92112199
Gene position: 83464-84318 (Clockwise)
Preceding gene: 92112197
Following gene: 92112203
Centisome position: 2.26
GC content: 64.56
Gene sequence:
>855_bases ATGGGCGAGCAACACTTCCCCGCGCAGGAACAGGCCGACCAGCCCGGCGACGAACATGCCATGCGGCCCGAGCCAGAGTA CATCCGCGACAGCTATCGCGGCACCGGCAAGCTCGACGGCAAGGTCGCCATCATCACCGGCGGCGACAGCGGCATCGGTC GTGCCGTGGCAGTGCATTTCGCCCGCGAGGGCGCCAATTGCGTCATCGTCTATCTCAACGAAGCGCGCGACGCCGAGGAT ACCCAGGCGCTGGTCGAAGCCGAGGGGCGCGAGTGCGTCCTGGTGCAAGGCGATGTCGGCGACCCGGTGCTGTGTCGCCA TGTGGTCGACACGACGCTGGCGAGCTTCGGCGCGGTCAATATCCTGGTCAACAACGCCGCCGAGCAGTATGACTGGGACG ATGTCACGCAGATTCCCGACGACCAGGTACAGCGGACCTTCCAGACCAATGTCTTCAGCCATTTCTACATGGCCAAGTAC GCGCTGCCCCACATGCACGAGGGCGACACCATCATCGCCACCTCATCGGTCAATGCCTTCAAGGGCAATGACACGCTGAT CGACTACACGGCGACCAAGGGAGCCATCCAGGGGCTGGTGCGTTCGCTGGCGATGTCCCTGGTCGATCGCGACATTCGCG TCAACGCCGTCGCCCCTGGCCCGGTATGGACGCCCCTGATCCCCGCCAGTTTCGACGAGGACAAGGTCGCCGGCTTCGGA GGCCAGGTGCCCATGGACCGCGCCGGCCAGCCCAGTGAAATGGGCCCCGCCTACGTCTACCTCGCCAGCGAGGAGTCTTC CTACATGAACGGCCAGACGCTGCATCTCAACGGCGGCGTGATCCTCAATACCTGA
Upstream 100 bases:
>100_bases AACGCGATGCGGCGCCCGACCGGTACGGTTCGCTTGGCCTGGACGTCGGCGGCTTCTATGGTGAGACATGGTAGTTCCCA CCATTCAAGGAGCGAATGAC
Downstream 100 bases:
>100_bases ACCGAGAGGGGGGGCGATCGTCGCTTTCGGTGAGGCGCTCAGGCCTCTACGGGCGCCATCACCTGCTTCAATTCCTGCTA GGCAGTCAGGCCCTGGGGAT
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: ORFX [H]
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MGEQHFPAQEQADQPGDEHAMRPEPEYIRDSYRGTGKLDGKVAIITGGDSGIGRAVAVHFAREGANCVIVYLNEARDAED TQALVEAEGRECVLVQGDVGDPVLCRHVVDTTLASFGAVNILVNNAAEQYDWDDVTQIPDDQVQRTFQTNVFSHFYMAKY ALPHMHEGDTIIATSSVNAFKGNDTLIDYTATKGAIQGLVRSLAMSLVDRDIRVNAVAPGPVWTPLIPASFDEDKVAGFG GQVPMDRAGQPSEMGPAYVYLASEESSYMNGQTLHLNGGVILNT
Sequences:
>Translated_284_residues MGEQHFPAQEQADQPGDEHAMRPEPEYIRDSYRGTGKLDGKVAIITGGDSGIGRAVAVHFAREGANCVIVYLNEARDAED TQALVEAEGRECVLVQGDVGDPVLCRHVVDTTLASFGAVNILVNNAAEQYDWDDVTQIPDDQVQRTFQTNVFSHFYMAKY ALPHMHEGDTIIATSSVNAFKGNDTLIDYTATKGAIQGLVRSLAMSLVDRDIRVNAVAPGPVWTPLIPASFDEDKVAGFG GQVPMDRAGQPSEMGPAYVYLASEESSYMNGQTLHLNGGVILNT >Mature_283_residues GEQHFPAQEQADQPGDEHAMRPEPEYIRDSYRGTGKLDGKVAIITGGDSGIGRAVAVHFAREGANCVIVYLNEARDAEDT QALVEAEGRECVLVQGDVGDPVLCRHVVDTTLASFGAVNILVNNAAEQYDWDDVTQIPDDQVQRTFQTNVFSHFYMAKYA LPHMHEGDTIIATSSVNAFKGNDTLIDYTATKGAIQGLVRSLAMSLVDRDIRVNAVAPGPVWTPLIPASFDEDKVAGFGG QVPMDRAGQPSEMGPAYVYLASEESSYMNGQTLHLNGGVILNT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=250, Percent_Identity=30, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI19923817, Length=262, Percent_Identity=29.0076335877863, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI40254992, Length=244, Percent_Identity=31.5573770491803, Blast_Score=99, Evalue=6e-21, Organism=Homo sapiens, GI126723750, Length=253, Percent_Identity=28.8537549407115, Blast_Score=96, Evalue=5e-20, Organism=Homo sapiens, GI10190704, Length=276, Percent_Identity=28.2608695652174, Blast_Score=96, Evalue=5e-20, Organism=Homo sapiens, GI4758504, Length=257, Percent_Identity=29.1828793774319, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI59889578, Length=229, Percent_Identity=29.2576419213974, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI5031737, Length=245, Percent_Identity=28.1632653061224, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI66933014, Length=262, Percent_Identity=30.9160305343511, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI15277342, Length=258, Percent_Identity=27.906976744186, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI33667109, Length=219, Percent_Identity=29.6803652968037, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI310128830, Length=192, Percent_Identity=29.1666666666667, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI310115468, Length=192, Percent_Identity=29.1666666666667, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI31542939, Length=212, Percent_Identity=30.188679245283, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI83715985, Length=258, Percent_Identity=28.2945736434109, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI7705925, Length=247, Percent_Identity=29.1497975708502, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI126723191, Length=182, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI210032110, Length=170, Percent_Identity=30, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI4504505, Length=252, Percent_Identity=26.5873015873016, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI4503301, Length=258, Percent_Identity=24.4186046511628, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI40807363, Length=190, Percent_Identity=27.8947368421053, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI142976729, Length=195, Percent_Identity=28.2051282051282, Blast_Score=66, Evalue=4e-11, Organism=Escherichia coli, GI1789378, Length=276, Percent_Identity=42.7536231884058, Blast_Score=231, Evalue=5e-62, Organism=Escherichia coli, GI1787335, Length=247, Percent_Identity=34.8178137651822, Blast_Score=131, Evalue=6e-32, Organism=Escherichia coli, GI2367175, Length=251, Percent_Identity=30.2788844621514, Blast_Score=118, Evalue=4e-28, Organism=Escherichia coli, GI1789208, Length=261, Percent_Identity=33.3333333333333, Blast_Score=116, Evalue=2e-27, Organism=Escherichia coli, GI1787905, Length=249, Percent_Identity=30.9236947791165, Blast_Score=115, Evalue=2e-27, Organism=Escherichia coli, GI87082100, Length=257, Percent_Identity=32.6848249027237, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1788459, Length=245, Percent_Identity=31.4285714285714, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1790717, Length=248, Percent_Identity=29.8387096774194, Blast_Score=97, Evalue=8e-22, Organism=Escherichia coli, GI87082160, Length=256, Percent_Identity=29.296875, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI2367365, Length=244, Percent_Identity=29.9180327868852, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1786812, Length=256, Percent_Identity=25.78125, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI1787526, Length=245, Percent_Identity=26.1224489795918, Blast_Score=65, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17560676, Length=253, Percent_Identity=32.0158102766798, Blast_Score=124, Evalue=5e-29, Organism=Caenorhabditis elegans, GI17561402, Length=251, Percent_Identity=32.2709163346614, Blast_Score=124, Evalue=6e-29, Organism=Caenorhabditis elegans, GI17560150, Length=260, Percent_Identity=33.0769230769231, Blast_Score=113, Evalue=9e-26, Organism=Caenorhabditis elegans, GI17538480, Length=265, Percent_Identity=33.9622641509434, Blast_Score=107, Evalue=6e-24, Organism=Caenorhabditis elegans, GI17555706, Length=273, Percent_Identity=31.5018315018315, Blast_Score=105, Evalue=3e-23, Organism=Caenorhabditis elegans, GI25147288, Length=248, Percent_Identity=31.4516129032258, Blast_Score=105, Evalue=4e-23, Organism=Caenorhabditis elegans, GI17551412, Length=263, Percent_Identity=33.0798479087452, Blast_Score=103, Evalue=7e-23, Organism=Caenorhabditis elegans, GI17562910, Length=271, Percent_Identity=31.3653136531365, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI193204405, Length=259, Percent_Identity=29.7297297297297, Blast_Score=100, Evalue=7e-22, Organism=Caenorhabditis elegans, GI17562906, Length=264, Percent_Identity=31.0606060606061, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17562990, Length=263, Percent_Identity=32.6996197718631, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17559104, Length=263, Percent_Identity=31.9391634980989, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17560332, Length=268, Percent_Identity=32.8358208955224, Blast_Score=97, Evalue=7e-21, Organism=Caenorhabditis elegans, GI17565030, Length=263, Percent_Identity=31.9391634980989, Blast_Score=94, Evalue=6e-20, Organism=Caenorhabditis elegans, GI17562904, Length=270, Percent_Identity=28.5185185185185, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17538486, Length=261, Percent_Identity=31.0344827586207, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17538182, Length=257, Percent_Identity=29.1828793774319, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17544670, Length=266, Percent_Identity=27.8195488721804, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17562908, Length=263, Percent_Identity=27.7566539923954, Blast_Score=91, Evalue=8e-19, Organism=Caenorhabditis elegans, GI72000259, Length=271, Percent_Identity=29.8892988929889, Blast_Score=91, Evalue=9e-19, Organism=Caenorhabditis elegans, GI17536025, Length=253, Percent_Identity=26.0869565217391, Blast_Score=90, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17563726, Length=264, Percent_Identity=29.1666666666667, Blast_Score=89, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17536651, Length=278, Percent_Identity=26.6187050359712, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI71994600, Length=254, Percent_Identity=29.5275590551181, Blast_Score=88, Evalue=6e-18, Organism=Caenorhabditis elegans, GI71994604, Length=249, Percent_Identity=28.9156626506024, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17560220, Length=266, Percent_Identity=27.4436090225564, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17531453, Length=259, Percent_Identity=27.7992277992278, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI193203117, Length=257, Percent_Identity=28.4046692607004, Blast_Score=81, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17567345, Length=195, Percent_Identity=28.7179487179487, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI193203115, Length=254, Percent_Identity=28.3464566929134, Blast_Score=79, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17564282, Length=189, Percent_Identity=31.7460317460317, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17561272, Length=275, Percent_Identity=25.4545454545455, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI115534694, Length=243, Percent_Identity=27.5720164609054, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17508895, Length=207, Percent_Identity=26.0869565217391, Blast_Score=65, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17568967, Length=197, Percent_Identity=28.4263959390863, Blast_Score=65, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6323882, Length=199, Percent_Identity=27.6381909547739, Blast_Score=68, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6324126, Length=252, Percent_Identity=24.2063492063492, Blast_Score=67, Evalue=3e-12, Organism=Drosophila melanogaster, GI21355319, Length=251, Percent_Identity=30.2788844621514, Blast_Score=112, Evalue=2e-25, Organism=Drosophila melanogaster, GI28571526, Length=245, Percent_Identity=31.0204081632653, Blast_Score=108, Evalue=3e-24, Organism=Drosophila melanogaster, GI21357041, Length=245, Percent_Identity=29.3877551020408, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI24639444, Length=254, Percent_Identity=30.7086614173228, Blast_Score=94, Evalue=7e-20, Organism=Drosophila melanogaster, GI24644339, Length=251, Percent_Identity=29.0836653386454, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI24643142, Length=243, Percent_Identity=30.0411522633745, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI23397609, Length=252, Percent_Identity=28.5714285714286, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI17737361, Length=257, Percent_Identity=26.0700389105058, Blast_Score=84, Evalue=9e-17, Organism=Drosophila melanogaster, GI281364892, Length=188, Percent_Identity=30.3191489361702, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24580925, Length=229, Percent_Identity=28.3842794759825, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI24644337, Length=264, Percent_Identity=31.8181818181818, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI21357673, Length=202, Percent_Identity=29.2079207920792, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI18859837, Length=209, Percent_Identity=27.7511961722488, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI21355631, Length=175, Percent_Identity=30.2857142857143, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI116007236, Length=202, Percent_Identity=28.2178217821782, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 30702; Mature: 30571
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEQHFPAQEQADQPGDEHAMRPEPEYIRDSYRGTGKLDGKVAIITGGDSGIGRAVAVHF CCCCCCCCHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEEE AREGANCVIVYLNEARDAEDTQALVEAEGRECVLVQGDVGDPVLCRHVVDTTLASFGAVN ECCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCEEE ILVNNAAEQYDWDDVTQIPDDQVQRTFQTNVFSHFYMAKYALPHMHEGDTIIATSSVNAF EEEECCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEE KGNDTLIDYTATKGAIQGLVRSLAMSLVDRDIRVNAVAPGPVWTPLIPASFDEDKVAGFG CCCCCEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC GQVPMDRAGQPSEMGPAYVYLASEESSYMNGQTLHLNGGVILNT CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCEEEEC >Mature Secondary Structure GEQHFPAQEQADQPGDEHAMRPEPEYIRDSYRGTGKLDGKVAIITGGDSGIGRAVAVHF CCCCCCCHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEEE AREGANCVIVYLNEARDAEDTQALVEAEGRECVLVQGDVGDPVLCRHVVDTTLASFGAVN ECCCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCEEE ILVNNAAEQYDWDDVTQIPDDQVQRTFQTNVFSHFYMAKYALPHMHEGDTIIATSSVNAF EEEECCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEE KGNDTLIDYTATKGAIQGLVRSLAMSLVDRDIRVNAVAPGPVWTPLIPASFDEDKVAGFG CCCCCEEEEECCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC GQVPMDRAGQPSEMGPAYVYLASEESSYMNGQTLHLNGGVILNT CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377; 8196543 [H]