| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is 92112159
Identifier: 92112159
GI number: 92112159
Start: 27974
End: 28576
Strand: Direct
Name: 92112159
Synonym: Csal_0023
Alternate gene names: NA
Gene position: 27974-28576 (Clockwise)
Preceding gene: 92112156
Following gene: 92112160
Centisome position: 0.76
GC content: 67.0
Gene sequence:
>603_bases ATGTCCCTCATCGACGAACAACTCGATTTTTCCCGTGTCGCCGACACCTTCCTCGCCCATGGCAGTCTGCAGTCTCCGGC GTTTCTCGACGGCCGCCTGTGCGCGCGTCTGGCGCTGGACGATATCGCCGCCGACACCTGGCTCGAGGAAGTCTGCGCGA CCCTGGGCGTCGATCAACCCAAGAGCCGCGAGGATGGCGAAGTGCTCCTCGCCTGGCGACAGCAGACGCTCGATGCCCTG GCCGCGCCGGAGCTCAATTTCGAGCCCCTGCTGCCGGATGAGCTGTTCTCCCTCGCCGAGCGCGCCCGCGGGCTCCAGGA GTGGACTCAGGGCTTCCTGGAGGCCGTCGCCGAAGTCGCCAGCGACAAGCGCGATGGCTGGTCGGCGGCCCTGCGCGAAG TGCTCGAGGATCTCGCTTCGCTCACCGAGTTCGACATCGAGCTCGACGAGACCGCGGAGAACGAGAACGACCTGTTCGCC TTGACCGAGCATGCCCGCATGGCGGCCATGCTGCTCTACACCGAGCAGCACCCCGGTCAGCCCCAGGTCGAGCGCGTCGA CACCGAGGATGACGGCAGCACGCCGCCCGACCAGACACACTGA
Upstream 100 bases:
>100_bases GAGCCTGCGTTCGCCGCCATGTAAGCCATCGATCACTATAAAGAGCCGCCAGGTCGCGGTCAACGCGCCCCGGCGGCCTG CCACACCATAGGACCGTTTC
Downstream 100 bases:
>100_bases TGGGCTCGCGCGCCGGGGTGCGCCCCGGCGTGCCCCCGCGACCGAGGAGCTTGTCATGCCCCGCACTCCCCTGCCGCGTC CTGCGGCGATCTCTCCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MSLIDEQLDFSRVADTFLAHGSLQSPAFLDGRLCARLALDDIAADTWLEEVCATLGVDQPKSREDGEVLLAWRQQTLDAL AAPELNFEPLLPDELFSLAERARGLQEWTQGFLEAVAEVASDKRDGWSAALREVLEDLASLTEFDIELDETAENENDLFA LTEHARMAAMLLYTEQHPGQPQVERVDTEDDGSTPPDQTH
Sequences:
>Translated_200_residues MSLIDEQLDFSRVADTFLAHGSLQSPAFLDGRLCARLALDDIAADTWLEEVCATLGVDQPKSREDGEVLLAWRQQTLDAL AAPELNFEPLLPDELFSLAERARGLQEWTQGFLEAVAEVASDKRDGWSAALREVLEDLASLTEFDIELDETAENENDLFA LTEHARMAAMLLYTEQHPGQPQVERVDTEDDGSTPPDQTH >Mature_199_residues SLIDEQLDFSRVADTFLAHGSLQSPAFLDGRLCARLALDDIAADTWLEEVCATLGVDQPKSREDGEVLLAWRQQTLDALA APELNFEPLLPDELFSLAERARGLQEWTQGFLEAVAEVASDKRDGWSAALREVLEDLASLTEFDIELDETAENENDLFAL TEHARMAAMLLYTEQHPGQPQVERVDTEDDGSTPPDQTH
Specific function: Unknown
COG id: COG3079
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0149 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011978 [H]
Pfam domain/function: PF03695 UPF0149 [H]
EC number: NA
Molecular weight: Translated: 22240; Mature: 22108
Theoretical pI: Translated: 3.82; Mature: 3.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLIDEQLDFSRVADTFLAHGSLQSPAFLDGRLCARLALDDIAADTWLEEVCATLGVDQP CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC KSREDGEVLLAWRQQTLDALAAPELNFEPLLPDELFSLAERARGLQEWTQGFLEAVAEVA CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SDKRDGWSAALREVLEDLASLTEFDIELDETAENENDLFALTEHARMAAMLLYTEQHPGQ HCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCC PQVERVDTEDDGSTPPDQTH CCHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SLIDEQLDFSRVADTFLAHGSLQSPAFLDGRLCARLALDDIAADTWLEEVCATLGVDQP CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC KSREDGEVLLAWRQQTLDALAAPELNFEPLLPDELFSLAERARGLQEWTQGFLEAVAEVA CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SDKRDGWSAALREVLEDLASLTEFDIELDETAENENDLFALTEHARMAAMLLYTEQHPGQ HCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCC PQVERVDTEDDGSTPPDQTH CCHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA