| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91785780
Identifier: 91785780
GI number: 91785780
Start: 4858318
End: 4858740
Strand: Reverse
Name: 91785780
Synonym: Bxe_A4498
Alternate gene names: NA
Gene position: 4858740-4858318 (Counterclockwise)
Preceding gene: 91785789
Following gene: 91785776
Centisome position: 99.24
GC content: 67.85
Gene sequence:
>423_bases ATGATGCGCATGAACGCCATCCAAATCCGCCTTCTGTCGCTCGCGCTGTTCGCCGTGTTCTGCGCGACGCTGACCTATTG GGTCATCACGCTCAGCACGATGTCCGGTGCGCCGTTGCCCGCGGCTGCCGCGCATGCGCAGGTCTCGACCGACCAGGCCG CCACGCTGTTCGGCGGCCAGCTCACGCGCAGCGCCAACCAGGACGTGCGGCTGTTCGGCATCCTCGCGTTGCGGGAAGGC GCCGCGGCTATCGTCAGCGTCGGCGGCGAACCACCGCATGCGGTGTCGCTCGGCAGCGCGCTGATGCAAGGCGCCAAACT CTCCGAGGTCCGTGCCCGCTCGATCATCATCGACCGCAATGGCGCGCACTCCGAAGTGTTCCTGCCCGCCAACCCCGCCG GTCCCACGATCTACGTGCGCTGA
Upstream 100 bases:
>100_bases CGGCCCGCTCCGGGTTTGCTCGCCCTCCCGGGGAACTGGCTCGAAGCACCGGGCTAGAGAAGCGCTTCAACCCAACGCAA TTTTCACAATAGTCCGTACA
Downstream 100 bases:
>100_bases AACAAGGCGCCGGGCCAGGCGCCGAACAGCAGCTTCGCTCCGACTGATTGCGCGCTCGCCGCACCGACACGCGACGCCGG TCACGCGCAATCCAGTTTTC
Product: putative general secretory pathway protein C
Products: NA
Alternate protein names: General Secretion Pathway Protein C; General Secretion Pathway Related Transmembrane Protein
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MMRMNAIQIRLLSLALFAVFCATLTYWVITLSTMSGAPLPAAAAHAQVSTDQAATLFGGQLTRSANQDVRLFGILALREG AAAIVSVGGEPPHAVSLGSALMQGAKLSEVRARSIIIDRNGAHSEVFLPANPAGPTIYVR
Sequences:
>Translated_140_residues MMRMNAIQIRLLSLALFAVFCATLTYWVITLSTMSGAPLPAAAAHAQVSTDQAATLFGGQLTRSANQDVRLFGILALREG AAAIVSVGGEPPHAVSLGSALMQGAKLSEVRARSIIIDRNGAHSEVFLPANPAGPTIYVR >Mature_140_residues MMRMNAIQIRLLSLALFAVFCATLTYWVITLSTMSGAPLPAAAAHAQVSTDQAATLFGGQLTRSANQDVRLFGILALREG AAAIVSVGGEPPHAVSLGSALMQGAKLSEVRARSIIIDRNGAHSEVFLPANPAGPTIYVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14658; Mature: 14658
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRMNAIQIRLLSLALFAVFCATLTYWVITLSTMSGAPLPAAAAHAQVSTDQAATLFGGQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHCCH LTRSANQDVRLFGILALREGAAAIVSVGGEPPHAVSLGSALMQGAKLSEVRARSIIIDRN HCCCCCCCEEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHCCCCHHHHHEEEEEEECC GAHSEVFLPANPAGPTIYVR CCCCEEEEECCCCCCEEEEC >Mature Secondary Structure MMRMNAIQIRLLSLALFAVFCATLTYWVITLSTMSGAPLPAAAAHAQVSTDQAATLFGGQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHCCH LTRSANQDVRLFGILALREGAAAIVSVGGEPPHAVSLGSALMQGAKLSEVRARSIIIDRN HCCCCCCCEEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHCCCCHHHHHEEEEEEECC GAHSEVFLPANPAGPTIYVR CCCCEEEEECCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA