| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is iagB [H]
Identifier: 91785776
GI number: 91785776
Start: 4852086
End: 4852532
Strand: Reverse
Name: iagB [H]
Synonym: Bxe_A4502
Alternate gene names: 91785776
Gene position: 4852532-4852086 (Counterclockwise)
Preceding gene: 91785780
Following gene: 91785775
Centisome position: 99.12
GC content: 60.18
Gene sequence:
>447_bases ATGAAACATCCCTTCGTTACCGTGGCCGCAGGACTTGCCGTGCTGATCGCAGCAGGGTCGGCACGCGCCGACTGCTTTGA CGAAGCCGCGAGGTATCAGAAGGTCAACCCCCTGATTCTGCGCGCAATTGCGTGGCAGGAGTCACATAATCGGCCCGATG CGCAACATAAGAACGCCAACGGCTCGATCGACTACGGCGTCATGCAGATCAATTCCGTCCATCTGCCCACGCTCGCCCAG TACGGCATCTCGCAAGGCACGCTCATGGAGCCGTGCAAGAACGTCTATATCGCGGCATGGCATCTGCGCCGCCAGATGAA CAAGTACGGCAACACCTGGCAGGCCATCGGCGCATATCATTCCGAAACCCCGGCACTGCGGGACAAGTACGCGCAGCAGA TCGTCGCGATCCTGCGCAAGTGGAATCTGATGCCGGCAGCGCGCTGA
Upstream 100 bases:
>100_bases GCCCCGCCAGCGTGGCCCGGCGGCCGTCAGCGGCTGAAGTATGGCCGACGCGATCCCTTACCGAACCTTACTCTTGCGCA TTACTTAGTGGTCTTGACCG
Downstream 100 bases:
>100_bases TCCGGCCGGTTGGTCTGGCCCATTGCGCGGCCACGGCCCGTTTTGATGCACAATGCGGCTTCGTGCTGCCGTCGCGCCCC GAACATCATTCGGGTCACGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MKHPFVTVAAGLAVLIAAGSARADCFDEAARYQKVNPLILRAIAWQESHNRPDAQHKNANGSIDYGVMQINSVHLPTLAQ YGISQGTLMEPCKNVYIAAWHLRRQMNKYGNTWQAIGAYHSETPALRDKYAQQIVAILRKWNLMPAAR
Sequences:
>Translated_148_residues MKHPFVTVAAGLAVLIAAGSARADCFDEAARYQKVNPLILRAIAWQESHNRPDAQHKNANGSIDYGVMQINSVHLPTLAQ YGISQGTLMEPCKNVYIAAWHLRRQMNKYGNTWQAIGAYHSETPALRDKYAQQIVAILRKWNLMPAAR >Mature_148_residues MKHPFVTVAAGLAVLIAAGSARADCFDEAARYQKVNPLILRAIAWQESHNRPDAQHKNANGSIDYGVMQINSVHLPTLAQ YGISQGTLMEPCKNVYIAAWHLRRQMNKYGNTWQAIGAYHSETPALRDKYAQQIVAILRKWNLMPAAR
Specific function: Unknown
COG id: COG0741
COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iagB/ipgF/P19 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008258 [H]
Pfam domain/function: PF01464 SLT [H]
EC number: NA
Molecular weight: Translated: 16556; Mature: 16556
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHPFVTVAAGLAVLIAAGSARADCFDEAARYQKVNPLILRAIAWQESHNRPDAQHKNAN CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCC GSIDYGVMQINSVHLPTLAQYGISQGTLMEPCKNVYIAAWHLRRQMNKYGNTWQAIGAYH CCEEEEEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC SETPALRDKYAQQIVAILRKWNLMPAAR CCCCHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKHPFVTVAAGLAVLIAAGSARADCFDEAARYQKVNPLILRAIAWQESHNRPDAQHKNAN CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCC GSIDYGVMQINSVHLPTLAQYGISQGTLMEPCKNVYIAAWHLRRQMNKYGNTWQAIGAYH CCEEEEEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC SETPALRDKYAQQIVAILRKWNLMPAAR CCCCHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7754225; 11677608; 12644504 [H]