| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91785754
Identifier: 91785754
GI number: 91785754
Start: 4827090
End: 4828304
Strand: Reverse
Name: 91785754
Synonym: Bxe_A0019
Alternate gene names: NA
Gene position: 4828304-4827090 (Counterclockwise)
Preceding gene: 91785755
Following gene: 91785753
Centisome position: 98.62
GC content: 62.63
Gene sequence:
>1215_bases ATGAAAAAGAACCCCCTCGCGCGGCTTGCCACACTTTGTTTCGCGGTCGCCGCCGGCGCCGCCTTGACGATGGGCAGCGC GCAAGCGGCTGACGACTCGGTGAAGATCGGTTTCATCACCGACATGTCGGGTCTGTATGCGGATATCGACGGCCAGGGCG GCCTCGAAGCGATCCGCATGGCAGTGGCGGACTTTGGCGGCAAGGTCAACGGCAAGCCGATCACCGTGGTCTACGCCGAT CACCAGAACAAGGCGGACATCGCGGCCTCGCGCGCACGCGAGTGGTTCGATCGCGACGGGGTGGATATGCTGATCGGCGG CACGAACTCGGCAACGGGTTTGTCGATGAACACCGTGGCCGGCGAAAAGAAGAAGGTGTATATCAGCATCGGCGCGGGCG CCGACACGCTCACTAACGAGCAATGCACGCCGTACACGGTCCACTATGCGTACGACACCACGGCGCTGGCCAAGGGCACG GGCTCGGCGGTGACGAAGCAGGGCGGCAAGACCTGGTACTTCCTCACGGCCGACTACGCGTTCGGCAAGGCGCTCGAGAA GAACACGGCGGACGTGGTGAAGGCGAACGGCGGCCAGGTGCTCGGCGCGGTGCGCCATCCGCTGTCGGCGTCGGACTTCT CTTCGTTCCTGTTGCAGGCGCAGGCCTCGAAGGCGCAGATTCTGGGCCTCGCGAACGCGGGCGGCGACACGATCAACTCG ATCAAGGCGGCCAAGGAATTCGGCATCACCAAGACGATGAAGCTCGCCGCGCTGCTGGTGTTCATCGACGACATCCACAG CCTGGGCCTCGAAACCACCCAGGGTCTCGTGCTGACGGACAGCTGGTACTGGAACAAGGACGCCACGACTCGCAAGTGGG CGGAGCGCTACTTCGACAAGATGAAGAAGATGCCGTCGAGCCTGCAGGCGGCCGACTATTCGGCGACCATGACCTATCTG AACGCGGTGAAGGCGGTGGGTTCGACCGACTCCGACAAGGTGATGGCGCAACTGAAGAAGACGAAGATCGACGACTTCTA CGCGAAGGGCTACATCCGTCAGGACGGCAGCATGATCCACGACATGTACCTGATGCAGGTGAAGACGCCGGCCGAATCCA GGGAGCCGTGGGACTACTACAAGATCACCGCGACTATCCCTGGCGAGCAGGCGTTCACGACCAAGGCGGAAACGCGCTGC GCGTTGTGGAAATAA
Upstream 100 bases:
>100_bases AGCTCGAAACCAAGATGCCGATCCTGCACGATCTTTTGGGCGTATAAAAAACCGCCCGAATGCCTCTGATAACCACAAGC GAAGAAACCAGGAGACAGGA
Downstream 100 bases:
>100_bases GCGCTGGTTGGTAACCAGACGGCCGTCTGTCTGCTGCTACTGGCGTGCGATACGTAGTGTCGCGTTGGTACACAGGTCGA CGGCAAACCGGTTCACATGC
Product: branched chain amino acid ABC transporter periplasmic ligand-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MKKNPLARLATLCFAVAAGAALTMGSAQAADDSVKIGFITDMSGLYADIDGQGGLEAIRMAVADFGGKVNGKPITVVYAD HQNKADIAASRAREWFDRDGVDMLIGGTNSATGLSMNTVAGEKKKVYISIGAGADTLTNEQCTPYTVHYAYDTTALAKGT GSAVTKQGGKTWYFLTADYAFGKALEKNTADVVKANGGQVLGAVRHPLSASDFSSFLLQAQASKAQILGLANAGGDTINS IKAAKEFGITKTMKLAALLVFIDDIHSLGLETTQGLVLTDSWYWNKDATTRKWAERYFDKMKKMPSSLQAADYSATMTYL NAVKAVGSTDSDKVMAQLKKTKIDDFYAKGYIRQDGSMIHDMYLMQVKTPAESREPWDYYKITATIPGEQAFTTKAETRC ALWK
Sequences:
>Translated_404_residues MKKNPLARLATLCFAVAAGAALTMGSAQAADDSVKIGFITDMSGLYADIDGQGGLEAIRMAVADFGGKVNGKPITVVYAD HQNKADIAASRAREWFDRDGVDMLIGGTNSATGLSMNTVAGEKKKVYISIGAGADTLTNEQCTPYTVHYAYDTTALAKGT GSAVTKQGGKTWYFLTADYAFGKALEKNTADVVKANGGQVLGAVRHPLSASDFSSFLLQAQASKAQILGLANAGGDTINS IKAAKEFGITKTMKLAALLVFIDDIHSLGLETTQGLVLTDSWYWNKDATTRKWAERYFDKMKKMPSSLQAADYSATMTYL NAVKAVGSTDSDKVMAQLKKTKIDDFYAKGYIRQDGSMIHDMYLMQVKTPAESREPWDYYKITATIPGEQAFTTKAETRC ALWK >Mature_404_residues MKKNPLARLATLCFAVAAGAALTMGSAQAADDSVKIGFITDMSGLYADIDGQGGLEAIRMAVADFGGKVNGKPITVVYAD HQNKADIAASRAREWFDRDGVDMLIGGTNSATGLSMNTVAGEKKKVYISIGAGADTLTNEQCTPYTVHYAYDTTALAKGT GSAVTKQGGKTWYFLTADYAFGKALEKNTADVVKANGGQVLGAVRHPLSASDFSSFLLQAQASKAQILGLANAGGDTINS IKAAKEFGITKTMKLAALLVFIDDIHSLGLETTQGLVLTDSWYWNKDATTRKWAERYFDKMKKMPSSLQAADYSATMTYL NAVKAVGSTDSDKVMAQLKKTKIDDFYAKGYIRQDGSMIHDMYLMQVKTPAESREPWDYYKITATIPGEQAFTTKAETRC ALWK
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 43546; Mature: 43546
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNPLARLATLCFAVAAGAALTMGSAQAADDSVKIGFITDMSGLYADIDGQGGLEAIRM CCCCHHHHHHHHHHHHHHCHHEECCCCCCCCCCEEEEEEECCCCCEEECCCCCCHHHHHH AVADFGGKVNGKPITVVYADHQNKADIAASRAREWFDRDGVDMLIGGTNSATGLSMNTVA HHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEECCC GEKKKVYISIGAGADTLTNEQCTPYTVHYAYDTTALAKGTGSAVTKQGGKTWYFLTADYA CCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCHHHCCCCCCHHHCCCCCEEEEEEECCH FGKALEKNTADVVKANGGQVLGAVRHPLSASDFSSFLLQAQASKAQILGLANAGGDTINS HHHHHHCCCCCEEECCCCEEEHHHHCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHH IKAAKEFGITKTMKLAALLVFIDDIHSLGLETTQGLVLTDSWYWNKDATTRKWAERYFDK HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEECCCCCHHHHHHHHHHH MKKMPSSLQAADYSATMTYLNAVKAVGSTDSDKVMAQLKKTKIDDFYAKGYIRQDGSMIH HHCCCCHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHCCEEECCCCEEE DMYLMQVKTPAESREPWDYYKITATIPGEQAFTTKAETRCALWK EEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEECCC >Mature Secondary Structure MKKNPLARLATLCFAVAAGAALTMGSAQAADDSVKIGFITDMSGLYADIDGQGGLEAIRM CCCCHHHHHHHHHHHHHHCHHEECCCCCCCCCCEEEEEEECCCCCEEECCCCCCHHHHHH AVADFGGKVNGKPITVVYADHQNKADIAASRAREWFDRDGVDMLIGGTNSATGLSMNTVA HHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEECCC GEKKKVYISIGAGADTLTNEQCTPYTVHYAYDTTALAKGTGSAVTKQGGKTWYFLTADYA CCCEEEEEEECCCCCCCCCCCCCCEEEEEEECCHHHCCCCCCHHHCCCCCEEEEEEECCH FGKALEKNTADVVKANGGQVLGAVRHPLSASDFSSFLLQAQASKAQILGLANAGGDTINS HHHHHHCCCCCEEECCCCEEEHHHHCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHH IKAAKEFGITKTMKLAALLVFIDDIHSLGLETTQGLVLTDSWYWNKDATTRKWAERYFDK HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEECCCCCHHHHHHHHHHH MKKMPSSLQAADYSATMTYLNAVKAVGSTDSDKVMAQLKKTKIDDFYAKGYIRQDGSMIH HHCCCCHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHCCEEECCCCEEE DMYLMQVKTPAESREPWDYYKITATIPGEQAFTTKAETRCALWK EEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA