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The map label for this gene is flhC [H]

Identifier: 91785662

GI number: 91785662

Start: 4720977

End: 4721537

Strand: Reverse

Name: flhC [H]

Synonym: Bxe_A0115

Alternate gene names: 91785662

Gene position: 4721537-4720977 (Counterclockwise)

Preceding gene: 91785663

Following gene: 91785661

Centisome position: 96.44

GC content: 60.25

Gene sequence:

>561_bases
ATGGCCTATAAAAGTGTTGTGCTCGAAGTCAGGGAGATCACCCTGGCCATCGAACTGATCGAACTTGGCGCGCGTTTGCA
GTTGCTGGAGGCTGAAACCAGCCTGTCGCGCGACCGGCTCATCAAGCTGTACAAGGAACTGAAAGGGGTGTCGCCACCCA
AGGGCATGCTGCCGTTTTCGACTGACTGGTTCATGACCTGGCAGCCGAACTTTCACTCGTCGCTGTTCTACAACATCTAC
CGTTTCATGGCCGGCCACGGCGGTTGCCTGACGATCCAGTCGATCGTGAAGAGCTATCGCCTCTATCTGGAACATGTCCA
GTTGCACGACGACGAGCCCGTGCTCAGTCTCACGCGCGCCTGGACGCTGGTGCGCTTTTTCGACTCCGGGATGCTGCAAA
TGACCGCCTGCTGCCGTTGCGGAGGACATTTTGTCGCGCATGCGCACGATCCCCAGCACGCGTTCGTCTGCGGACTGTGC
CAGCCGCCCTCGCGCGCCGGTAAGACAAAGAAATTCGCCGACGCCCGCGCCCGCGAGAGCCTCGCCGCCCTGGAAGCTTG
A

Upstream 100 bases:

>100_bases
GCATTCCGCGATCCTGATGGCAAGCCAGCCAGTCGAGCAACTCGGCTGATGGCACGTTGTAACCAAAGCCAGGCAATCAG
GACAGGGGAAACGCTAACGG

Downstream 100 bases:

>100_bases
CCCACAAGGCGGCCCGCCTGCGCGGTCCGCCATCCGCCCCCCATGCGGCGGGCCTTCCAGCCCGCCCGCACGACGCCCGG
TCCCGCCGGGGCCGGCTGTT

Product: transcriptional activator FlhC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MAYKSVVLEVREITLAIELIELGARLQLLEAETSLSRDRLIKLYKELKGVSPPKGMLPFSTDWFMTWQPNFHSSLFYNIY
RFMAGHGGCLTIQSIVKSYRLYLEHVQLHDDEPVLSLTRAWTLVRFFDSGMLQMTACCRCGGHFVAHAHDPQHAFVCGLC
QPPSRAGKTKKFADARARESLAALEA

Sequences:

>Translated_186_residues
MAYKSVVLEVREITLAIELIELGARLQLLEAETSLSRDRLIKLYKELKGVSPPKGMLPFSTDWFMTWQPNFHSSLFYNIY
RFMAGHGGCLTIQSIVKSYRLYLEHVQLHDDEPVLSLTRAWTLVRFFDSGMLQMTACCRCGGHFVAHAHDPQHAFVCGLC
QPPSRAGKTKKFADARARESLAALEA
>Mature_185_residues
AYKSVVLEVREITLAIELIELGARLQLLEAETSLSRDRLIKLYKELKGVSPPKGMLPFSTDWFMTWQPNFHSSLFYNIYR
FMAGHGGCLTIQSIVKSYRLYLEHVQLHDDEPVLSLTRAWTLVRFFDSGMLQMTACCRCGGHFVAHAHDPQHAFVCGLCQ
PPSRAGKTKKFADARARESLAALEA

Specific function: Transcriptional activator. Together with flhD it acts as a compound sigma factor that activates class 2 flagellar genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flhC family [H]

Homologues:

Organism=Escherichia coli, GI1788201, Length=177, Percent_Identity=58.7570621468927, Blast_Score=230, Evalue=4e-62,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007944
- ProDom:   PD016592 [H]

Pfam domain/function: PF05280 FlhC [H]

EC number: NA

Molecular weight: Translated: 21064; Mature: 20933

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYKSVVLEVREITLAIELIELGARLQLLEAETSLSRDRLIKLYKELKGVSPPKGMLPFS
CCHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCC
TDWFMTWQPNFHSSLFYNIYRFMAGHGGCLTIQSIVKSYRLYLEHVQLHDDEPVLSLTRA
CCEEEEECCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
WTLVRFFDSGMLQMTACCRCGGHFVAHAHDPQHAFVCGLCQPPSRAGKTKKFADARARES
HHHHHHHHCCHHHHHHHHHCCCCEEEECCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHH
LAALEA
HHHHCC
>Mature Secondary Structure 
AYKSVVLEVREITLAIELIELGARLQLLEAETSLSRDRLIKLYKELKGVSPPKGMLPFS
CHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCC
TDWFMTWQPNFHSSLFYNIYRFMAGHGGCLTIQSIVKSYRLYLEHVQLHDDEPVLSLTRA
CCEEEEECCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
WTLVRFFDSGMLQMTACCRCGGHFVAHAHDPQHAFVCGLCQPPSRAGKTKKFADARARES
HHHHHHHHCCHHHHHHHHHCCCCEEEECCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHH
LAALEA
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9287017 [H]