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The map label for this gene is flhD [H]

Identifier: 91785663

GI number: 91785663

Start: 4721589

End: 4721909

Strand: Reverse

Name: flhD [H]

Synonym: Bxe_A0114

Alternate gene names: 91785663

Gene position: 4721909-4721589 (Counterclockwise)

Preceding gene: 91785665

Following gene: 91785662

Centisome position: 96.45

GC content: 58.57

Gene sequence:

>321_bases
ATGAGCGCGACAAGCGATATGCTCAATGAGATCAGAGAAGTTAACCTGTCTTATCTCCTGCTCGCACAGCGACTGCTGCG
CGAAGACAAGCCGATGGGCATGTTTCGCATGGGGATTTCGGACCAGTTAGCCGATGTGCTCGCCAATCTGTCGTTGGCGC
AGACCGTCAAGCTGGCAGCGTCCAATCAGGTGTTGTGCCGTTTCCGTTTCGACGACCATGCCGTGCTGTCCGCTCTGGCG
GACAAGGGCAAATCCGGCGCCGTGGCACAGGCGCATTCCGCGATCCTGATGGCAAGCCAGCCAGTCGAGCAACTCGGCTG
A

Upstream 100 bases:

>100_bases
CGCAAGACCAGAAACGAGCCGATTCGTGCGGTTTAAGCGCGCGCGTCCGAGCAAACGTTTCCGCAACGGCCTGACCAGCC
AGATACACCCCGGGGGAATC

Downstream 100 bases:

>100_bases
TGGCACGTTGTAACCAAAGCCAGGCAATCAGGACAGGGGAAACGCTAACGGATGGCCTATAAAAGTGTTGTGCTCGAAGT
CAGGGAGATCACCCTGGCCA

Product: transcriptional activator FlhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MSATSDMLNEIREVNLSYLLLAQRLLREDKPMGMFRMGISDQLADVLANLSLAQTVKLAASNQVLCRFRFDDHAVLSALA
DKGKSGAVAQAHSAILMASQPVEQLG

Sequences:

>Translated_106_residues
MSATSDMLNEIREVNLSYLLLAQRLLREDKPMGMFRMGISDQLADVLANLSLAQTVKLAASNQVLCRFRFDDHAVLSALA
DKGKSGAVAQAHSAILMASQPVEQLG
>Mature_105_residues
SATSDMLNEIREVNLSYLLLAQRLLREDKPMGMFRMGISDQLADVLANLSLAQTVKLAASNQVLCRFRFDDHAVLSALAD
KGKSGAVAQAHSAILMASQPVEQLG

Specific function: Transcriptional activator. Involved in the regulation of a number of genetic systems [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FlhD family [H]

Homologues:

Organism=Escherichia coli, GI145693151, Length=109, Percent_Identity=44.0366972477064, Blast_Score=100, Evalue=3e-23,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007911
- ProDom:   PD015582 [H]

Pfam domain/function: PF05247 FlhD [H]

EC number: NA

Molecular weight: Translated: 11488; Mature: 11357

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATSDMLNEIREVNLSYLLLAQRLLREDKPMGMFRMGISDQLADVLANLSLAQTVKLAA
CCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHCCHHHHHHHHHC
SNQVLCRFRFDDHAVLSALADKGKSGAVAQAHSAILMASQPVEQLG
CCCEEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHCC
>Mature Secondary Structure 
SATSDMLNEIREVNLSYLLLAQRLLREDKPMGMFRMGISDQLADVLANLSLAQTVKLAA
CCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHCCHHHHHHHHHC
SNQVLCRFRFDDHAVLSALADKGKSGAVAQAHSAILMASQPVEQLG
CCCEEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA