| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91785581
Identifier: 91785581
GI number: 91785581
Start: 4637277
End: 4637789
Strand: Reverse
Name: 91785581
Synonym: Bxe_A0196
Alternate gene names: NA
Gene position: 4637789-4637277 (Counterclockwise)
Preceding gene: 91785588
Following gene: 91785579
Centisome position: 94.73
GC content: 60.62
Gene sequence:
>513_bases ATGTCGCGCCATCCCACCAAGATCGTCTCCTCGGAACATCTCGTGTCCGAGACCAGCGCGGAACTGTCAGAACTCGAGTA CGCGCTCATCATGGCAGGCAACGCATTCAACCGATGGATGGTGCGCTGCATGTCGGCGGCCGGCGACAAGGACATGACCG CCATCGAGGTCTCGCTGCTGCATCACGTCAGCCACCGCGAGCGCCGCAAGAAGCTGGCGGACATCTGCTTCGTGCTGAAC ATCGAAGACACGCACGTCGCCACGTACGCGTTGAAGAAGCTCGTAGCTAGAGGGTATGTAAAAAGCGAAAAGACCGGCAA GGAAGTGTTCTTCTCCGCGACCGAGGCCGGCCGCGAACTCTGTCTGAAATATCGCGAGGTGCGCGAGAGCTGTCTGATTT CGACGCTCAAGGAAAGCGGCCTGACCAACGAGCAGATCGGCGAAGCGGCGCAACTGATGCGCAACGCGTCCGGTCTCTAC GACACGGCCGCGCGGGCGGCCGCGTCGTTATAA
Upstream 100 bases:
>100_bases CAACAATTTATCAATAAGCGTTTTTGCCAGGCTCCCCTGGATCGGGCGCTCGTCGTACACTCCCGACACCTTCCCCAATT GCCTCTCGAGAATCCTCGCC
Downstream 100 bases:
>100_bases CGCAGCGCGGTTTGCGCGGTTTGCGCGGCGGCGGGGCGGCCGCTTGTGCCGCGCTCACCCAACGTTTAATCCACCGGGCG CGGATAAAGCGCCGCCTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Transcription Regulator; MarR Family Regulatory Helix-Turn-Helix Protein; Transcription Regulator MarR-Type HTH Domain
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MSRHPTKIVSSEHLVSETSAELSELEYALIMAGNAFNRWMVRCMSAAGDKDMTAIEVSLLHHVSHRERRKKLADICFVLN IEDTHVATYALKKLVARGYVKSEKTGKEVFFSATEAGRELCLKYREVRESCLISTLKESGLTNEQIGEAAQLMRNASGLY DTAARAAASL
Sequences:
>Translated_170_residues MSRHPTKIVSSEHLVSETSAELSELEYALIMAGNAFNRWMVRCMSAAGDKDMTAIEVSLLHHVSHRERRKKLADICFVLN IEDTHVATYALKKLVARGYVKSEKTGKEVFFSATEAGRELCLKYREVRESCLISTLKESGLTNEQIGEAAQLMRNASGLY DTAARAAASL >Mature_169_residues SRHPTKIVSSEHLVSETSAELSELEYALIMAGNAFNRWMVRCMSAAGDKDMTAIEVSLLHHVSHRERRKKLADICFVLNI EDTHVATYALKKLVARGYVKSEKTGKEVFFSATEAGRELCLKYREVRESCLISTLKESGLTNEQIGEAAQLMRNASGLYD TAARAAASL
Specific function: Unknown
COG id: COG5631
COG function: function code K; Predicted transcription regulator, contains HTH domain (MarR family)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18883; Mature: 18752
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRHPTKIVSSEHLVSETSAELSELEYALIMAGNAFNRWMVRCMSAAGDKDMTAIEVSLL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH HHVSHRERRKKLADICFVLNIEDTHVATYALKKLVARGYVKSEKTGKEVFFSATEAGREL HHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH CLKYREVRESCLISTLKESGLTNEQIGEAAQLMRNASGLYDTAARAAASL HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCC >Mature Secondary Structure SRHPTKIVSSEHLVSETSAELSELEYALIMAGNAFNRWMVRCMSAAGDKDMTAIEVSLL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH HHVSHRERRKKLADICFVLNIEDTHVATYALKKLVARGYVKSEKTGKEVFFSATEAGREL HHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH CLKYREVRESCLISTLKESGLTNEQIGEAAQLMRNASGLYDTAARAAASL HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA