| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is glmS [H]
Identifier: 91785569
GI number: 91785569
Start: 4624493
End: 4626310
Strand: Reverse
Name: glmS [H]
Synonym: Bxe_A0208
Alternate gene names: 91785569
Gene position: 4626310-4624493 (Counterclockwise)
Preceding gene: 91785570
Following gene: 91785568
Centisome position: 94.49
GC content: 63.2
Gene sequence:
>1818_bases ATGTGTGGCATTGTCGGCGCGGTAGCGCAACGTAATATCGTCCCCGTCCTGATCGAAGGACTGCGTCGCCTCGAGTATCG CGGCTACGATTCGTGCGGCGTGGCCGTGCTCGGCAGCGACGGTCCGCGCCGTGCGCGCAGCGTCGCGCGTGTGGCCGATC TCGACGAGCAGGTGCGCGAGAGCCATCTTGAAGGCATCACGGGTATCGCGCATACGCGCTGGGCCACGCACGGCGCGCCG GTCACGGACAACGCCCACCCGATCTTCTCGAAAGACGCACTCGCGTTGGTACACAACGGCATCATCGAGAACTACGAGAC GCTGCGCGACATGCTGCGCGGCAAGGGTTACACGTTTGTTTCGCAGACCGACACAGAGGTTATCGCGCATCTGATTCACA GCCTGTATCACGGCGATCTGTTCGCGGCGGTGCGCGAAGCGGTCGGGCAACTGCACGGCGCGTATGCGATCGCCGTGTTG CATAAAGACCAGCCGCATACGGTGGTCGGCGCGCGGCAGGGTTCGCCGCTGGTGGTCGGGCTCGGCGAGGGCGAGAACTT CCTTGCCTCGGACGCGTTGGCGCTCGCGGGCAGCACCGAACGGTTCATCTTCCTCGAAGAAGGCGACGTCTGCGAACTGA CGCTCGAGGGCGTGCGCATCGCCGATCGCGACGGCTACGAGGCGCAGCGCGAAGTGCGCCAGGTGGCGGCGTATGGCGGC GCGGTCGAACTCGGCCCGTATCGTCACTTCATGCAGAAGGAAATCTTCGAACAGCCGCGCGCGATCACGGACACGATTCC GCAAGCGGATTCGTTCGACCCGTCGTTATTCGGCGAGGGCGCGGGCAAGGTGTTCGCGGAGATCGACAGCCTGCTGATTC TGGCGTGCGGCACGAGCTATTACTCGGGGCTGACCGCGAAATACTGGCTCGAATCGATCGCGAAGATTCCCACGCAGGTG GAAATTGCCAGCGAGTATCGTTACCGCGAGTCGGTGCCGAATCCGAAGTCGCTGGTCGTCGTGATCTCCCAATCGGGCGA AACGGCGGACACGCTGGCGGCGCTCAAGCATGCACAGGAGCTCGGTCACAAGCATACGCTGGCAATCTGCAACGTCGGTA CGAGCGCGATGGTGCGCCAGACCGAGCTGGCGTTCCTGACGCACGCGGGCCGCGAGATCGGTGTGGCATCGACCAAGGCG TTCACGACGCAGCTGGTTGGGCTGTTCGTGTTGGCGGCAACGCTGGGCAAGTTGCGCGGGCGTGTGAGCGAAGAGCAGGA AGGGGAGTATCTGAAGCAACTGCGTCACTTGCCGGCGGCATTGAATAGCGTGCTGGCGCTGGAGCCGCAGATCATTGCGT GGTCGGAAGAGTTTTCGCGCAAGGAGCATGCGCTGTTTCTCGGGCGCGGCTTGCATTATCCGATCGCACTCGAGGGCGCG CTCAAGCTCAAGGAGATCTCGTATATCCACGCCGAGGCTTATCCGGCCGGCGAGTTGAAGCATGGGCCGCTCGCGCTCGT GACCGAAGCCATGCCGGTGGTGACGGTGGCGCCGAACGACGCGCTGCTGGAAAAGCTGAAGTCGAATATTCAGGAAGTGC GCGCGCGCGGCGGTCAGCTGTATGTGTTCGCCGACGCGGATACGAAGATCGTCAACGACGAAGGTTTGCATGTGATCCGG ATGCCGGAGCATTACGGCCTGTTGTCGCCGATCTTGCATGTGGTGCCGCTGCAGTTGCTGGCGTATCACACGGCGTGTGC GCGCGGTACGGATGTGGATAAGCCGCGGAATCTGGCGAAGTCTGTGACGGTGGAGTGA
Upstream 100 bases:
>100_bases GGCTACGTGCGCCCGACCAAAAAGAAGAGCTGATGGGTACGACGCGCGCCCGAGGCGCGCTCCTTGAAACCCGGCACTAG CACTGAAAAAGGAATGATCC
Downstream 100 bases:
>100_bases GGGGGGCTTAACGCCACCATGCTGTCCCGCCCAAATAGAAAGCTTCCGGAAGTAGTGGTCGGAAGCTTTTTGCGAGGGGG GCTCAACCCCTCGCTCAGCC
Product: glucosamine--fructose-6-phosphate aminotransferase
Products: NA
Alternate protein names: D-fructose-6-phosphate amidotransferase; GFAT; Glucosamine-6-phosphate synthase; Hexosephosphate aminotransferase; L-glutamine-D-fructose-6-phosphate amidotransferase [H]
Number of amino acids: Translated: 605; Mature: 605
Protein sequence:
>605_residues MCGIVGAVAQRNIVPVLIEGLRRLEYRGYDSCGVAVLGSDGPRRARSVARVADLDEQVRESHLEGITGIAHTRWATHGAP VTDNAHPIFSKDALALVHNGIIENYETLRDMLRGKGYTFVSQTDTEVIAHLIHSLYHGDLFAAVREAVGQLHGAYAIAVL HKDQPHTVVGARQGSPLVVGLGEGENFLASDALALAGSTERFIFLEEGDVCELTLEGVRIADRDGYEAQREVRQVAAYGG AVELGPYRHFMQKEIFEQPRAITDTIPQADSFDPSLFGEGAGKVFAEIDSLLILACGTSYYSGLTAKYWLESIAKIPTQV EIASEYRYRESVPNPKSLVVVISQSGETADTLAALKHAQELGHKHTLAICNVGTSAMVRQTELAFLTHAGREIGVASTKA FTTQLVGLFVLAATLGKLRGRVSEEQEGEYLKQLRHLPAALNSVLALEPQIIAWSEEFSRKEHALFLGRGLHYPIALEGA LKLKEISYIHAEAYPAGELKHGPLALVTEAMPVVTVAPNDALLEKLKSNIQEVRARGGQLYVFADADTKIVNDEGLHVIR MPEHYGLLSPILHVVPLQLLAYHTACARGTDVDKPRNLAKSVTVE
Sequences:
>Translated_605_residues MCGIVGAVAQRNIVPVLIEGLRRLEYRGYDSCGVAVLGSDGPRRARSVARVADLDEQVRESHLEGITGIAHTRWATHGAP VTDNAHPIFSKDALALVHNGIIENYETLRDMLRGKGYTFVSQTDTEVIAHLIHSLYHGDLFAAVREAVGQLHGAYAIAVL HKDQPHTVVGARQGSPLVVGLGEGENFLASDALALAGSTERFIFLEEGDVCELTLEGVRIADRDGYEAQREVRQVAAYGG AVELGPYRHFMQKEIFEQPRAITDTIPQADSFDPSLFGEGAGKVFAEIDSLLILACGTSYYSGLTAKYWLESIAKIPTQV EIASEYRYRESVPNPKSLVVVISQSGETADTLAALKHAQELGHKHTLAICNVGTSAMVRQTELAFLTHAGREIGVASTKA FTTQLVGLFVLAATLGKLRGRVSEEQEGEYLKQLRHLPAALNSVLALEPQIIAWSEEFSRKEHALFLGRGLHYPIALEGA LKLKEISYIHAEAYPAGELKHGPLALVTEAMPVVTVAPNDALLEKLKSNIQEVRARGGQLYVFADADTKIVNDEGLHVIR MPEHYGLLSPILHVVPLQLLAYHTACARGTDVDKPRNLAKSVTVE >Mature_605_residues MCGIVGAVAQRNIVPVLIEGLRRLEYRGYDSCGVAVLGSDGPRRARSVARVADLDEQVRESHLEGITGIAHTRWATHGAP VTDNAHPIFSKDALALVHNGIIENYETLRDMLRGKGYTFVSQTDTEVIAHLIHSLYHGDLFAAVREAVGQLHGAYAIAVL HKDQPHTVVGARQGSPLVVGLGEGENFLASDALALAGSTERFIFLEEGDVCELTLEGVRIADRDGYEAQREVRQVAAYGG AVELGPYRHFMQKEIFEQPRAITDTIPQADSFDPSLFGEGAGKVFAEIDSLLILACGTSYYSGLTAKYWLESIAKIPTQV EIASEYRYRESVPNPKSLVVVISQSGETADTLAALKHAQELGHKHTLAICNVGTSAMVRQTELAFLTHAGREIGVASTKA FTTQLVGLFVLAATLGKLRGRVSEEQEGEYLKQLRHLPAALNSVLALEPQIIAWSEEFSRKEHALFLGRGLHYPIALEGA LKLKEISYIHAEAYPAGELKHGPLALVTEAMPVVTVAPNDALLEKLKSNIQEVRARGGQLYVFADADTKIVNDEGLHVIR MPEHYGLLSPILHVVPLQLLAYHTACARGTDVDKPRNLAKSVTVE
Specific function: Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source [H]
COG id: COG0449
COG function: function code M; Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 SIS domains [H]
Homologues:
Organism=Homo sapiens, GI205277386, Length=685, Percent_Identity=37.0802919708029, Blast_Score=390, Evalue=1e-108, Organism=Homo sapiens, GI4826742, Length=687, Percent_Identity=35.6622998544396, Blast_Score=384, Evalue=1e-106, Organism=Escherichia coli, GI1790167, Length=611, Percent_Identity=56.4648117839607, Blast_Score=663, Evalue=0.0, Organism=Escherichia coli, GI1788651, Length=241, Percent_Identity=28.2157676348548, Blast_Score=67, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17539970, Length=434, Percent_Identity=39.1705069124424, Blast_Score=280, Evalue=2e-75, Organism=Caenorhabditis elegans, GI17532899, Length=433, Percent_Identity=38.1062355658199, Blast_Score=275, Evalue=4e-74, Organism=Caenorhabditis elegans, GI17532897, Length=433, Percent_Identity=38.1062355658199, Blast_Score=275, Evalue=7e-74, Organism=Saccharomyces cerevisiae, GI6322745, Length=448, Percent_Identity=36.8303571428571, Blast_Score=265, Evalue=2e-71, Organism=Saccharomyces cerevisiae, GI6323731, Length=433, Percent_Identity=30.2540415704388, Blast_Score=197, Evalue=5e-51, Organism=Saccharomyces cerevisiae, GI6323730, Length=205, Percent_Identity=34.6341463414634, Blast_Score=113, Evalue=8e-26, Organism=Saccharomyces cerevisiae, GI6323958, Length=176, Percent_Identity=29.5454545454545, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI21357745, Length=685, Percent_Identity=35.3284671532847, Blast_Score=375, Evalue=1e-104, Organism=Drosophila melanogaster, GI28573187, Length=255, Percent_Identity=25.8823529411765, Blast_Score=74, Evalue=4e-13, Organism=Drosophila melanogaster, GI24659598, Length=258, Percent_Identity=27.1317829457364, Blast_Score=72, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000583 - InterPro: IPR017932 - InterPro: IPR005855 - InterPro: IPR001347 [H]
Pfam domain/function: PF00310 GATase_2; PF01380 SIS [H]
EC number: =2.6.1.16 [H]
Molecular weight: Translated: 65825; Mature: 65825
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: PS00443 GATASE_TYPE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGIVGAVAQRNIVPVLIEGLRRLEYRGYDSCGVAVLGSDGPRRARSVARVADLDEQVRE CCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHH SHLEGITGIAHTRWATHGAPVTDNAHPIFSKDALALVHNGIIENYETLRDMLRGKGYTFV HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEE SQTDTEVIAHLIHSLYHGDLFAAVREAVGQLHGAYAIAVLHKDQPHTVVGARQGSPLVVG CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECCCCCCEEEE LGEGENFLASDALALAGSTERFIFLEEGDVCELTLEGVRIADRDGYEAQREVRQVAAYGG CCCCCCHHHHHHHHCCCCCCEEEEEECCCEEEEEECCEEEECCCCCHHHHHHHHHHHCCC AVELGPYRHFMQKEIFEQPRAITDTIPQADSFDPSLFGEGAGKVFAEIDSLLILACGTSY CEEECHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHCCCCCHHHHHHHHHHHEEEECCHH YSGLTAKYWLESIAKIPTQVEIASEYRYRESVPNPKSLVVVISQSGETADTLAALKHAQE HCCCHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHH LGHKHTLAICNVGTSAMVRQTELAFLTHAGREIGVASTKAFTTQLVGLFVLAATLGKLRG CCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC RVSEEQEGEYLKQLRHLPAALNSVLALEPQIIAWSEEFSRKEHALFLGRGLHYPIALEGA CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHCCHHHEEEEECCCCCCEEECCC LKLKEISYIHAEAYPAGELKHGPLALVTEAMPVVTVAPNDALLEKLKSNIQEVRARGGQL EEHHHHHEEEECCCCCCCCCCCCHHEEECCCCEEEECCCHHHHHHHHHHHHHHHHCCCEE YVFADADTKIVNDEGLHVIRMPEHYGLLSPILHVVPLQLLAYHTACARGTDVDKPRNLAK EEEECCCCEEECCCCEEEEECCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH SVTVE HCCCC >Mature Secondary Structure MCGIVGAVAQRNIVPVLIEGLRRLEYRGYDSCGVAVLGSDGPRRARSVARVADLDEQVRE CCCCHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHH SHLEGITGIAHTRWATHGAPVTDNAHPIFSKDALALVHNGIIENYETLRDMLRGKGYTFV HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEE SQTDTEVIAHLIHSLYHGDLFAAVREAVGQLHGAYAIAVLHKDQPHTVVGARQGSPLVVG CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECCCCCCEEEE LGEGENFLASDALALAGSTERFIFLEEGDVCELTLEGVRIADRDGYEAQREVRQVAAYGG CCCCCCHHHHHHHHCCCCCCEEEEEECCCEEEEEECCEEEECCCCCHHHHHHHHHHHCCC AVELGPYRHFMQKEIFEQPRAITDTIPQADSFDPSLFGEGAGKVFAEIDSLLILACGTSY CEEECHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHCCCCCHHHHHHHHHHHEEEECCHH YSGLTAKYWLESIAKIPTQVEIASEYRYRESVPNPKSLVVVISQSGETADTLAALKHAQE HCCCHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHH LGHKHTLAICNVGTSAMVRQTELAFLTHAGREIGVASTKAFTTQLVGLFVLAATLGKLRG CCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC RVSEEQEGEYLKQLRHLPAALNSVLALEPQIIAWSEEFSRKEHALFLGRGLHYPIALEGA CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHCCHHHEEEEECCCCCCEEECCC LKLKEISYIHAEAYPAGELKHGPLALVTEAMPVVTVAPNDALLEKLKSNIQEVRARGGQL EEHHHHHEEEECCCCCCCCCCCCHHEEECCCCEEEECCCHHHHHHHHHHHHHHHHCCCEE YVFADADTKIVNDEGLHVIRMPEHYGLLSPILHVVPLQLLAYHTACARGTDVDKPRNLAK EEEECCCCEEECCCCEEEEECCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH SVTVE HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]