| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91785520
Identifier: 91785520
GI number: 91785520
Start: 4580182
End: 4581750
Strand: Reverse
Name: 91785520
Synonym: Bxe_A0259
Alternate gene names: NA
Gene position: 4581750-4580182 (Counterclockwise)
Preceding gene: 91785521
Following gene: 91785517
Centisome position: 93.58
GC content: 61.31
Gene sequence:
>1569_bases ATGTCGAACGGCGCCGATCTTCCAGACGATGTCGAATTGTTGAAGGCCTTGCTGGTCGAGGCCCGTAGTCTGCTTGCTGA ACGCGATGTCGAGATCGAGCAGCTTAAGGCGCAGATCGACAAACTTCGGCGCATGCAGTTCGGCCGTAAGTCCGAACAGT TGCAGCGGCAGATCGAGACCCTCGAGACCCAACTCGAGGATCTGGCCGCCGGACGCGGCGTTGCAGACGTGGAGCGTGCA CAAGCTCGAGGCGCAAACGCTTCCTCCTCCAATGCAACGACGGACGAAGCGGCTTCGAGGCAAGCACTGGCTGCGCACCT CGCGCGTGAGGATCATGTGCTCGAGCCCGAATCGAGTTGCCCGGACTGCGGTCAACAGATGCAGGTGCTCGGTGAGGACG TGTCCGAGCAACTCGCCCGGGTCGCAGCGGCGTTCAAAGTCGTTCGCACGATCCGGCGCAAATTCGTTTGCCCATGCTGC AGCACCATCAGGCAGCCGCCGATGCCCGGCCTTCCGATCGAGCGAAGCATTGCCCATCCAAGCTTGCTGGCGGATATCCT CGTTTCGAAATACGCAGACCACCAGCCGTTGTATCGGCAATCGGCGATCGCGGCGCGCGACGGCGTGACGCTCGACCGGG CCAGCATGGGTCGCTGGGTCGGTCAATGCGAAGCGTTGTGCGCGCCGCTGATTGAGGCGCTGCGCCGCTATACGGTGTCG GCCGCCAAGCTGCATGCGGACGACACGCCGATCCCGGTGCTCTCACCGGGCAACAGGAAGACCCGCACCGGTCGGCTATG GGTCTATGTGCGCGACGATCGTCGCTCGGGGTCGACGCAACCCGCTGCGGTATGGTTCGCATACTCGCCGAACAGACAGG GCATCCACCCTCAGACTCATCTCGCCGGCTTCAGGGGGACCCTGCAAGCGGACGCTTACGCGGGCTTCGACGAGCTGTTC CTGGGTGGCTCCGTACTGGAAGCGGCATGTCATGCTCACGCGAGGAGAAAGTTCTACGACATCCACGTGCGCACGCCGTC CGACACGACGCAAAAAGCACTTGAATACATTGGCGCGCTATACGACATCGAGGCCTCCATTCGCGGCAAGCCAGCGGCCG AACGGCTACGAATACGGCAGGAGAAAGCCAGACCACTGCTTCAAACCTATGAAGCGTGGCTCAAGGCCAAGCTCGAAACG TTGTCGTCGAAGTCCGACACTGCCAAGGCGATCAACTACTCGATTAACCAGTGGCGCGCCCTGACGCTATATTGCGAAGA CGGCACGCTCGAGATCGACAATAACATCGCGGAAAACGCGTTGCGTTGTGTAAGCCTGGGTCGGAAGAATTTCCTGTTTG CCGGTTCCGACAGCGGCGGTGAACGGGCCGCCGCAATGTACGCGCTGATCGGAACTTGCGCACTGAACGACATCGATCCG CGCGCCTATCTGGACTATGTGCTAACTCACATCGCTGACCATAAAATCAATCGCATCGACGAGCTTCTGCCGTGGCGCGT GGCCGACAAGCTGCACACGCCAGCCAGTCCGCCGACACCCGCTACCTGA
Upstream 100 bases:
>100_bases ACTGTCGATGCTTCTCGAGGGCATCGATTGGCGACAGCCCCGTCGTACCGCCGCGTTATCGATGTTGTAAACCGCGCCGC AGACTCGTAAACTACGGCGT
Downstream 100 bases:
>100_bases CAGCCCAAGTCCGGATCACCATCATGCCTCACGTGCACGCGCGCGTGGACGAACGGCCCACGTGAGCCGCTTACTTGCTT ACTTTTTTGGTCGTGCGCGA
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 522; Mature: 521
Protein sequence:
>522_residues MSNGADLPDDVELLKALLVEARSLLAERDVEIEQLKAQIDKLRRMQFGRKSEQLQRQIETLETQLEDLAAGRGVADVERA QARGANASSSNATTDEAASRQALAAHLAREDHVLEPESSCPDCGQQMQVLGEDVSEQLARVAAAFKVVRTIRRKFVCPCC STIRQPPMPGLPIERSIAHPSLLADILVSKYADHQPLYRQSAIAARDGVTLDRASMGRWVGQCEALCAPLIEALRRYTVS AAKLHADDTPIPVLSPGNRKTRTGRLWVYVRDDRRSGSTQPAAVWFAYSPNRQGIHPQTHLAGFRGTLQADAYAGFDELF LGGSVLEAACHAHARRKFYDIHVRTPSDTTQKALEYIGALYDIEASIRGKPAAERLRIRQEKARPLLQTYEAWLKAKLET LSSKSDTAKAINYSINQWRALTLYCEDGTLEIDNNIAENALRCVSLGRKNFLFAGSDSGGERAAAMYALIGTCALNDIDP RAYLDYVLTHIADHKINRIDELLPWRVADKLHTPASPPTPAT
Sequences:
>Translated_522_residues MSNGADLPDDVELLKALLVEARSLLAERDVEIEQLKAQIDKLRRMQFGRKSEQLQRQIETLETQLEDLAAGRGVADVERA QARGANASSSNATTDEAASRQALAAHLAREDHVLEPESSCPDCGQQMQVLGEDVSEQLARVAAAFKVVRTIRRKFVCPCC STIRQPPMPGLPIERSIAHPSLLADILVSKYADHQPLYRQSAIAARDGVTLDRASMGRWVGQCEALCAPLIEALRRYTVS AAKLHADDTPIPVLSPGNRKTRTGRLWVYVRDDRRSGSTQPAAVWFAYSPNRQGIHPQTHLAGFRGTLQADAYAGFDELF LGGSVLEAACHAHARRKFYDIHVRTPSDTTQKALEYIGALYDIEASIRGKPAAERLRIRQEKARPLLQTYEAWLKAKLET LSSKSDTAKAINYSINQWRALTLYCEDGTLEIDNNIAENALRCVSLGRKNFLFAGSDSGGERAAAMYALIGTCALNDIDP RAYLDYVLTHIADHKINRIDELLPWRVADKLHTPASPPTPAT >Mature_521_residues SNGADLPDDVELLKALLVEARSLLAERDVEIEQLKAQIDKLRRMQFGRKSEQLQRQIETLETQLEDLAAGRGVADVERAQ ARGANASSSNATTDEAASRQALAAHLAREDHVLEPESSCPDCGQQMQVLGEDVSEQLARVAAAFKVVRTIRRKFVCPCCS TIRQPPMPGLPIERSIAHPSLLADILVSKYADHQPLYRQSAIAARDGVTLDRASMGRWVGQCEALCAPLIEALRRYTVSA AKLHADDTPIPVLSPGNRKTRTGRLWVYVRDDRRSGSTQPAAVWFAYSPNRQGIHPQTHLAGFRGTLQADAYAGFDELFL GGSVLEAACHAHARRKFYDIHVRTPSDTTQKALEYIGALYDIEASIRGKPAAERLRIRQEKARPLLQTYEAWLKAKLETL SSKSDTAKAINYSINQWRALTLYCEDGTLEIDNNIAENALRCVSLGRKNFLFAGSDSGGERAAAMYALIGTCALNDIDPR AYLDYVLTHIADHKINRIDELLPWRVADKLHTPASPPTPAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 25 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004291 [H]
Pfam domain/function: PF03050 Transposase_25 [H]
EC number: NA
Molecular weight: Translated: 57682; Mature: 57551
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNGADLPDDVELLKALLVEARSLLAERDVEIEQLKAQIDKLRRMQFGRKSEQLQRQIET CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LETQLEDLAAGRGVADVERAQARGANASSSNATTDEAASRQALAAHLAREDHVLEPESSC HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC PDCGQQMQVLGEDVSEQLARVAAAFKVVRTIRRKFVCPCCSTIRQPPMPGLPIERSIAHP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHCCH SLLADILVSKYADHQPLYRQSAIAARDGVTLDRASMGRWVGQCEALCAPLIEALRRYTVS HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAKLHADDTPIPVLSPGNRKTRTGRLWVYVRDDRRSGSTQPAAVWFAYSPNRQGIHPQTH HHHEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCHHH LAGFRGTLQADAYAGFDELFLGGSVLEAACHAHARRKFYDIHVRTPSDTTQKALEYIGAL HHHHCCCCCHHHHCCHHHHHHCHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHH YDIEASIRGKPAAERLRIRQEKARPLLQTYEAWLKAKLETLSSKSDTAKAINYSINQWRA HHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEE LTLYCEDGTLEIDNNIAENALRCVSLGRKNFLFAGSDSGGERAAAMYALIGTCALNDIDP EEEEECCCCEEECCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCH RAYLDYVLTHIADHKINRIDELLPWRVADKLHTPASPPTPAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SNGADLPDDVELLKALLVEARSLLAERDVEIEQLKAQIDKLRRMQFGRKSEQLQRQIET CCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LETQLEDLAAGRGVADVERAQARGANASSSNATTDEAASRQALAAHLAREDHVLEPESSC HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC PDCGQQMQVLGEDVSEQLARVAAAFKVVRTIRRKFVCPCCSTIRQPPMPGLPIERSIAHP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHCCH SLLADILVSKYADHQPLYRQSAIAARDGVTLDRASMGRWVGQCEALCAPLIEALRRYTVS HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAKLHADDTPIPVLSPGNRKTRTGRLWVYVRDDRRSGSTQPAAVWFAYSPNRQGIHPQTH HHHEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCHHH LAGFRGTLQADAYAGFDELFLGGSVLEAACHAHARRKFYDIHVRTPSDTTQKALEYIGAL HHHHCCCCCHHHHCCHHHHHHCHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHH YDIEASIRGKPAAERLRIRQEKARPLLQTYEAWLKAKLETLSSKSDTAKAINYSINQWRA HHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEE LTLYCEDGTLEIDNNIAENALRCVSLGRKNFLFAGSDSGGERAAAMYALIGTCALNDIDP EEEEECCCCEEECCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCH RAYLDYVLTHIADHKINRIDELLPWRVADKLHTPASPPTPAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]