| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91785517
Identifier: 91785517
GI number: 91785517
Start: 4578187
End: 4578840
Strand: Reverse
Name: 91785517
Synonym: Bxe_A0262
Alternate gene names: NA
Gene position: 4578840-4578187 (Counterclockwise)
Preceding gene: 91785520
Following gene: 91785516
Centisome position: 93.53
GC content: 64.22
Gene sequence:
>654_bases ATGAGCCGGTTACTTTGCCTGATCGTGCTTTCGCTCGGCCTGATACAGACCGCGGCGGCCGACGAGAACACCGATCGGAT GTCCGCGTATCTGACGCACAAATTCGGTCTGGCAAAGGAAAAGGCCCAAAAAATTTCGGACGCAGTGCAATCCGCCGCGT CGAAATACTCGCTCCCGCCAGCGCTCCTGCTGGCAATCATCTCGATCGAATCCCGCTTCAAGGAAAAGGCCAGGGGCGCC AACGGCGCGACCGGGCTGATGCAGGTCGTGCCGGGTGCGCATCGCGGGCTGCTGAGGAACGTCAAGGATCTCACTGAGCC GACCGCGAACATCGAAGTAGGCTCGGCGATCCTGTACGGCTATATGCGCTCGGCCAACGGCGACATGAACGCCGCGCTCA GGAGCTACGGCGGATCGCAAGCCTATGCGCAGAAGGTGAGCTTGCGGGCCGGAGATTTCGCGGCGGTCGCCGCGCCGCAA GACGCGTTGCAGCAGGCGGACGCGCAGGCCGGCGCGTGCTCGGCGCAGTCGGTATCTGACCGTTGCGCTGCGCTGGATAG CTGGGCCGATGCGTTCACCGTGCCGGCCGTCGGCGCGGCCGGGAAAAATGGCGCGGTTGCGTCTTCGATGGGACTTCCTC CTACGTCGCGCTAG
Upstream 100 bases:
>100_bases CGCCCGGCTACAATTCTTAAGACGAATTTCCGCCCGTTCTGGGTGTAATTTGGGGGCAGAGCTATAATGGCCGGATCCCT TTCTTTTCCTATCTTCCGCT
Downstream 100 bases:
>100_bases GCGACATCCTGCTTCGCCCGGCTTCTTTTCCCGCCGCGGCGCCGCGCCGAGGTGGTGCATTGTCACGTCCCGTAAGGCGG CGCGTTGCGTGTTTTTTACG
Product: hypothetical protein
Products: NA
Alternate protein names: Soluble Lytic Murein Transglycosylase- Related Protein; SLT Transglycosylase; Soluble Lytic Murein Transglycosylase
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MSRLLCLIVLSLGLIQTAAADENTDRMSAYLTHKFGLAKEKAQKISDAVQSAASKYSLPPALLLAIISIESRFKEKARGA NGATGLMQVVPGAHRGLLRNVKDLTEPTANIEVGSAILYGYMRSANGDMNAALRSYGGSQAYAQKVSLRAGDFAAVAAPQ DALQQADAQAGACSAQSVSDRCAALDSWADAFTVPAVGAAGKNGAVASSMGLPPTSR
Sequences:
>Translated_217_residues MSRLLCLIVLSLGLIQTAAADENTDRMSAYLTHKFGLAKEKAQKISDAVQSAASKYSLPPALLLAIISIESRFKEKARGA NGATGLMQVVPGAHRGLLRNVKDLTEPTANIEVGSAILYGYMRSANGDMNAALRSYGGSQAYAQKVSLRAGDFAAVAAPQ DALQQADAQAGACSAQSVSDRCAALDSWADAFTVPAVGAAGKNGAVASSMGLPPTSR >Mature_216_residues SRLLCLIVLSLGLIQTAAADENTDRMSAYLTHKFGLAKEKAQKISDAVQSAASKYSLPPALLLAIISIESRFKEKARGAN GATGLMQVVPGAHRGLLRNVKDLTEPTANIEVGSAILYGYMRSANGDMNAALRSYGGSQAYAQKVSLRAGDFAAVAAPQD ALQQADAQAGACSAQSVSDRCAALDSWADAFTVPAVGAAGKNGAVASSMGLPPTSR
Specific function: Unknown
COG id: COG0741
COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22403; Mature: 22271
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLLCLIVLSLGLIQTAAADENTDRMSAYLTHKFGLAKEKAQKISDAVQSAASKYSLPP CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH ALLLAIISIESRFKEKARGANGATGLMQVVPGAHRGLLRNVKDLTEPTANIEVGSAILYG HHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH YMRSANGDMNAALRSYGGSQAYAQKVSLRAGDFAAVAAPQDALQQADAQAGACSAQSVSD HHHHCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHCCCCCHHHHHH RCAALDSWADAFTVPAVGAAGKNGAVASSMGLPPTSR HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SRLLCLIVLSLGLIQTAAADENTDRMSAYLTHKFGLAKEKAQKISDAVQSAASKYSLPP HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH ALLLAIISIESRFKEKARGANGATGLMQVVPGAHRGLLRNVKDLTEPTANIEVGSAILYG HHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH YMRSANGDMNAALRSYGGSQAYAQKVSLRAGDFAAVAAPQDALQQADAQAGACSAQSVSD HHHHCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHCCCCCHHHHHH RCAALDSWADAFTVPAVGAAGKNGAVASSMGLPPTSR HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA