| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91785482
Identifier: 91785482
GI number: 91785482
Start: 4541559
End: 4542830
Strand: Reverse
Name: 91785482
Synonym: Bxe_A0297
Alternate gene names: NA
Gene position: 4542830-4541559 (Counterclockwise)
Preceding gene: 91785483
Following gene: 91785481
Centisome position: 92.79
GC content: 65.72
Gene sequence:
>1272_bases ATGAGCATTCGCACCCTGGCTGCCGCATGCGGCGCGGCACTGTTTGTCCAGTTTGCCGTTTCCCCGACCGTTTTCGCCGC CGACGCCCCGGCACATTGGGTCACCGCATGGGCCACGGCGCTGCAACCCATTCCCCAGCGGGCGGACCTGCCGCCGCTCT ATCGCGCACCGGAAGTCGCGGGGCGCACGGTTCGCCAGATTGTTTATCCGACGCTGTCCGCAAGGTCGGCGCGAGTCCAC CTTAGCAACCAGTACGGCAAGACTCCGCTCGTCATCGAGGATTTGCGCATCGCACGCTCGACGGGCGGCGCGGCGGCGGC CGGTAACGGCGACGCGCGCGTGACGTTCGGTGGCAGGAGCGCGATCTCGATTCCGCCGGGCGGGGAGTTGGAGAGCGACC CCGTCGCGATCGACATTGCCGAAGGTGCGCCTTACGCGGTAAGCGCGTTTATGGGGCCGGAGCAGCGTATCGTGGCGTGG CATCGCGTGTCGAACCAGGTAAATTACGTTTCCGCGCCGGGCAATCATGCGGCGGACGCATCTGCGGACGCTTTTCGCGG TCGGTTTACGCAATATGTGTGGGTGACCGGGCTTTCGGTTGAGGCTGCGCCCGCGTCTGCCGCAGTCGCTGCCATCGGCG ACTCGATCACGGACGGTATGCGCTCCAGTCTGAACCAGAATCGCCGCTGGCCGGACGCGCTGGCTCGCCGGTTTGCCGCG GCTGGCGAGCGCTCGACCGCGATCGTCAATCTGGGGATTAGCGGCAACCGCCTGCTGAGCGACTCCCCCTGCTACGGCGA CGCGCTTGCAACGCGCTTCGAGCACGACGTGCTGAAGCGTCCGGGCGTCAAGGCGGCGATCCTGCTGATTGGCATCAATG ACATTAACTTTGCGGCAATGCCGCCGCGTGGCGGTCTCGACTGTGACTTTCCGCACACCACGGTGACGGCTGCCGACCTG ATCGCTGGATATCAGCGAGTGATCGTCACCGCCCGGCACGCTGGCGTGAAGGTGTTCGGCGCGACGTTGACGCCGGCATC GCTTCCGCCGCAGCGAGAGAGTATCCGGCTTGCGGTCAACCAGTGGATCCGGACCAGCCATGCCTTCGACGGCGTCGTGG ACTTCGACGCTGCGCTGCGTGATCCGGCGCAGCCGGACCGTTTGCGGCGCAGCTTTGATAGTGGGGACGACATCCATCCC AGCGACGCCGGCTATGCAGCAATGGCCGGTGCGGTTCCAGTGGACGCAGTGGTGAAATCGACCCGTAATTGA
Upstream 100 bases:
>100_bases CGCAAGCGGCCTGAGTCCAGGGCGAAACGCTGTCGCGCCCACCCGCGACGGCCGCGGCGATCGGGCACAATGCACGTTTC GCCTCGAACCAACTTCCCGA
Downstream 100 bases:
>100_bases GCCGCCAAAAAAGAATTCGGTCAAACCCTTGTCATATGACCGATGTTCACCTAAGATTCGCTTCCTCGTTTGCGAACGAG GGCCGCGGCAGAAACCAGCG
Product: lipase/acylhydrolase
Products: NA
Alternate protein names: Lipolytic Protein G-D-S-L Family; GDSL Family Lipase; G-D-S-L Family Lipolytic Protein; Lipolytic G-D-S-L; Lipolytic; SGNH Hydrolase; GDSL-Like Lipase/Acylhydrolase Family Protein; Lipase/Acylhydrolase; GDSL-Like Lipase/Acylhydrolase; GDSL-Like Lipase/Acylhydrolase Domain Protein; Lipid Hydrolase; Lipolytic Protein; Lipolytic G-D-S-L Domain Protein; Esterase; LOW QUALITY PROTEIN Secreted Protein; GDSL-Like Protein; Lipolytic GDSL Family; Lysophospholipase L1-Like Esterase; GDSL-Like Lipase/Acylhydrolase Exported Protein; Lysophospholipase L1 Or Related Esterase
Number of amino acids: Translated: 423; Mature: 422
Protein sequence:
>423_residues MSIRTLAAACGAALFVQFAVSPTVFAADAPAHWVTAWATALQPIPQRADLPPLYRAPEVAGRTVRQIVYPTLSARSARVH LSNQYGKTPLVIEDLRIARSTGGAAAAGNGDARVTFGGRSAISIPPGGELESDPVAIDIAEGAPYAVSAFMGPEQRIVAW HRVSNQVNYVSAPGNHAADASADAFRGRFTQYVWVTGLSVEAAPASAAVAAIGDSITDGMRSSLNQNRRWPDALARRFAA AGERSTAIVNLGISGNRLLSDSPCYGDALATRFEHDVLKRPGVKAAILLIGINDINFAAMPPRGGLDCDFPHTTVTAADL IAGYQRVIVTARHAGVKVFGATLTPASLPPQRESIRLAVNQWIRTSHAFDGVVDFDAALRDPAQPDRLRRSFDSGDDIHP SDAGYAAMAGAVPVDAVVKSTRN
Sequences:
>Translated_423_residues MSIRTLAAACGAALFVQFAVSPTVFAADAPAHWVTAWATALQPIPQRADLPPLYRAPEVAGRTVRQIVYPTLSARSARVH LSNQYGKTPLVIEDLRIARSTGGAAAAGNGDARVTFGGRSAISIPPGGELESDPVAIDIAEGAPYAVSAFMGPEQRIVAW HRVSNQVNYVSAPGNHAADASADAFRGRFTQYVWVTGLSVEAAPASAAVAAIGDSITDGMRSSLNQNRRWPDALARRFAA AGERSTAIVNLGISGNRLLSDSPCYGDALATRFEHDVLKRPGVKAAILLIGINDINFAAMPPRGGLDCDFPHTTVTAADL IAGYQRVIVTARHAGVKVFGATLTPASLPPQRESIRLAVNQWIRTSHAFDGVVDFDAALRDPAQPDRLRRSFDSGDDIHP SDAGYAAMAGAVPVDAVVKSTRN >Mature_422_residues SIRTLAAACGAALFVQFAVSPTVFAADAPAHWVTAWATALQPIPQRADLPPLYRAPEVAGRTVRQIVYPTLSARSARVHL SNQYGKTPLVIEDLRIARSTGGAAAAGNGDARVTFGGRSAISIPPGGELESDPVAIDIAEGAPYAVSAFMGPEQRIVAWH RVSNQVNYVSAPGNHAADASADAFRGRFTQYVWVTGLSVEAAPASAAVAAIGDSITDGMRSSLNQNRRWPDALARRFAAA GERSTAIVNLGISGNRLLSDSPCYGDALATRFEHDVLKRPGVKAAILLIGINDINFAAMPPRGGLDCDFPHTTVTAADLI AGYQRVIVTARHAGVKVFGATLTPASLPPQRESIRLAVNQWIRTSHAFDGVVDFDAALRDPAQPDRLRRSFDSGDDIHPS DAGYAAMAGAVPVDAVVKSTRN
Specific function: Unknown
COG id: COG2755
COG function: function code E; Lysophospholipase L1 and related esterases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44618; Mature: 44486
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIRTLAAACGAALFVQFAVSPTVFAADAPAHWVTAWATALQPIPQRADLPPLYRAPEVA CCHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH GRTVRQIVYPTLSARSARVHLSNQYGKTPLVIEDLRIARSTGGAAAAGNGDARVTFGGRS HHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEHHHHHHHCCCCCEECCCCCEEEEECCCE AISIPPGGELESDPVAIDIAEGAPYAVSAFMGPEQRIVAWHRVSNQVNYVSAPGNHAADA EEECCCCCCCCCCCEEEEECCCCCEEEEECCCCCHHEEEEHHHCCCCEEEECCCCCCCCC SADAFRGRFTQYVWVTGLSVEAAPASAAVAAIGDSITDGMRSSLNQNRRWPDALARRFAA CHHHHHCCCEEEEEEECCEEECCCCHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHH AGERSTAIVNLGISGNRLLSDSPCYGDALATRFEHDVLKRPGVKAAILLIGINDINFAAM CCCCCEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEC PPRGGLDCDFPHTTVTAADLIAGYQRVIVTARHAGVKVFGATLTPASLPPQRESIRLAVN CCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCEEEEEEEECCCCCCCCHHHHHHHHH QWIRTSHAFDGVVDFDAALRDPAQPDRLRRSFDSGDDIHPSDAGYAAMAGAVPVDAVVKS HHHHHHHCCCCEEECHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCHHHCCCCCHHHHHHC TRN CCC >Mature Secondary Structure SIRTLAAACGAALFVQFAVSPTVFAADAPAHWVTAWATALQPIPQRADLPPLYRAPEVA CHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH GRTVRQIVYPTLSARSARVHLSNQYGKTPLVIEDLRIARSTGGAAAAGNGDARVTFGGRS HHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEHHHHHHHCCCCCEECCCCCEEEEECCCE AISIPPGGELESDPVAIDIAEGAPYAVSAFMGPEQRIVAWHRVSNQVNYVSAPGNHAADA EEECCCCCCCCCCCEEEEECCCCCEEEEECCCCCHHEEEEHHHCCCCEEEECCCCCCCCC SADAFRGRFTQYVWVTGLSVEAAPASAAVAAIGDSITDGMRSSLNQNRRWPDALARRFAA CHHHHHCCCEEEEEEECCEEECCCCHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHH AGERSTAIVNLGISGNRLLSDSPCYGDALATRFEHDVLKRPGVKAAILLIGINDINFAAM CCCCCEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEC PPRGGLDCDFPHTTVTAADLIAGYQRVIVTARHAGVKVFGATLTPASLPPQRESIRLAVN CCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCEEEEEEEECCCCCCCCHHHHHHHHH QWIRTSHAFDGVVDFDAALRDPAQPDRLRRSFDSGDDIHPSDAGYAAMAGAVPVDAVVKS HHHHHHHCCCCEEECHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCHHHCCCCCHHHHHHC TRN CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA