| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91785483
Identifier: 91785483
GI number: 91785483
Start: 4542917
End: 4544539
Strand: Reverse
Name: 91785483
Synonym: Bxe_A0296
Alternate gene names: NA
Gene position: 4544539-4542917 (Counterclockwise)
Preceding gene: 91785492
Following gene: 91785482
Centisome position: 92.82
GC content: 63.22
Gene sequence:
>1623_bases ATGTTACGTCTCAGCGAAATCAAACTCCCGCTCGATCACCCCGAGAGCGCCCTCGAAGCCGCCGTGCGTGCGCGTCTCGC GGAACTTGGCGTGGCCGCGGACGGGCTTATCCAATACACCGTGTTTCGCCGCGCGCACGACGCCCGCAAGCGCGCCGACA TCAAGCTCACGTATATAGTCGATGTCGAAGTTGCGGATGAAGCGGCGGCGCTCAAGCGGCTCGCCGACGTGCCCCACTGC GGCGTCACGCCCGACATGGCCTACAAGTTCGTCGCGAGAGCGCCGGCGCAGATGACCGCGCCCCGTCCGGTCGTGATCGG CATGGGGCCGTGCGGCCTGTTTGCCGGGCTGATCCTTGCGCAAATGGGCTTCCGGCCGATCATCCTGGAACGTGGCAAGG CGGTGCGCGAGCGCACCAAGGACACTTTCGGCCTGTGGCGCAAGTCGGTGCTCAATCCCGAGTCGAACGTGCAGTTCGGC GAAGGCGGCGCTGGTACCTTCTCGGACGGCAAGCTGTACAGCCAGATCAAGGATCCGAAGCACTACGGCCGCAAGGTGCT CGACGAATTCGTGCGGGCCGGTGCGCCGGAAGACATTCTGTATCTGAGCCGGCCCCATATCGGCACGTTCCGGCTCGTCA GCATGGTCGAAAAAATGCGCGCGACCATTCACGAACTGGGTGGCGAGGTGCGCTTCGAAACCCGCGTCGACGATATCGAG ATCGATCAGGGCAAGGTGCGCGGGTTGAAGCTCTCGACCGGTGAAACGCTGCGCTGCGATCACGTGGTGCTGGCGGTCGG ACATAGCGCGCGCGATACCTTCCAGATGCTGAACGACCGCGGCGTCTATATCGAGGCGAAGCCGTTTTCACTCGGTTTTC GCATCGAACATCCGCAGGGTTTGATCGATCGCAGCCGTTTCGGCAAATTTGCCGGCCACAAGCAGTTGGGTGCCGCCGAC TATAAGGTGGTGCATCACTGCAGCAATGGCCGCACTGTTTACAGCTTCTGCATGTGCCCCGGGGGCACGGTGGTGGCGGC GACTTCCGAGCCGGGCCGGGTGGTGACCAACGGCATGAGCCAGTATTCGCGGGCAGAGCGCAATGCCAATGCCGGGATCG TGGTCGGCATCACGCCTGACGATTATCCGGGCGGGCCGCTCGCGGGCATCGCCTTCCAGCGCAAATGGGAAGAGCGGGCT TTCGAACTCGGCGGCGGCAATTATATGGCGCCGGGTCAGCTGGTAGGCGATTTCATTGCCGGCCGGCCGTCCACGTCGCT GGGTTCCGTCGTGCCGTCGTATAAGCCCGGCGTGCATCCAACGGACCTTAGCACTGCGCTTCCGGACTATGTGATCGAGG CCATTCGCGAAGCTTTGCCGCAGATGGACAAGAAGATCGCCGGTTTTGCGATGCACGACGCGGTGCTGACGGGCGTCGAA ACGAGAACGTCGTCGCCGATTCGTGTGCGGCGCCGGGACGACTACCAGAGCATGAATGTCGAAGGTCTGTATCCGGCCGG CGAAGGAGCGGGCTATGCCGGTGGAATCTACTCAGCGGCTATCGACGGGATCGAAGTTGCTGAAGCGCTCGCGTTGAAGA TGACCGGCGCGCAAGCGGCCTGA
Upstream 100 bases:
>100_bases GCGGAGGCGTTTCGTCAGTGCCGATGCCCCGTGCCGACACTAAACCTATAAAATTACGAATTGGCCGCAATTTGCGGCCT TCCCGCATCCCCCGGTACTC
Downstream 100 bases:
>100_bases GTCCAGGGCGAAACGCTGTCGCGCCCACCCGCGACGGCCGCGGCGATCGGGCACAATGCACGTTTCGCCTCGAACCAACT TCCCGAATGAGCATTCGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: ORF1 [H]
Number of amino acids: Translated: 540; Mature: 540
Protein sequence:
>540_residues MLRLSEIKLPLDHPESALEAAVRARLAELGVAADGLIQYTVFRRAHDARKRADIKLTYIVDVEVADEAAALKRLADVPHC GVTPDMAYKFVARAPAQMTAPRPVVIGMGPCGLFAGLILAQMGFRPIILERGKAVRERTKDTFGLWRKSVLNPESNVQFG EGGAGTFSDGKLYSQIKDPKHYGRKVLDEFVRAGAPEDILYLSRPHIGTFRLVSMVEKMRATIHELGGEVRFETRVDDIE IDQGKVRGLKLSTGETLRCDHVVLAVGHSARDTFQMLNDRGVYIEAKPFSLGFRIEHPQGLIDRSRFGKFAGHKQLGAAD YKVVHHCSNGRTVYSFCMCPGGTVVAATSEPGRVVTNGMSQYSRAERNANAGIVVGITPDDYPGGPLAGIAFQRKWEERA FELGGGNYMAPGQLVGDFIAGRPSTSLGSVVPSYKPGVHPTDLSTALPDYVIEAIREALPQMDKKIAGFAMHDAVLTGVE TRTSSPIRVRRRDDYQSMNVEGLYPAGEGAGYAGGIYSAAIDGIEVAEALALKMTGAQAA
Sequences:
>Translated_540_residues MLRLSEIKLPLDHPESALEAAVRARLAELGVAADGLIQYTVFRRAHDARKRADIKLTYIVDVEVADEAAALKRLADVPHC GVTPDMAYKFVARAPAQMTAPRPVVIGMGPCGLFAGLILAQMGFRPIILERGKAVRERTKDTFGLWRKSVLNPESNVQFG EGGAGTFSDGKLYSQIKDPKHYGRKVLDEFVRAGAPEDILYLSRPHIGTFRLVSMVEKMRATIHELGGEVRFETRVDDIE IDQGKVRGLKLSTGETLRCDHVVLAVGHSARDTFQMLNDRGVYIEAKPFSLGFRIEHPQGLIDRSRFGKFAGHKQLGAAD YKVVHHCSNGRTVYSFCMCPGGTVVAATSEPGRVVTNGMSQYSRAERNANAGIVVGITPDDYPGGPLAGIAFQRKWEERA FELGGGNYMAPGQLVGDFIAGRPSTSLGSVVPSYKPGVHPTDLSTALPDYVIEAIREALPQMDKKIAGFAMHDAVLTGVE TRTSSPIRVRRRDDYQSMNVEGLYPAGEGAGYAGGIYSAAIDGIEVAEALALKMTGAQAA >Mature_540_residues MLRLSEIKLPLDHPESALEAAVRARLAELGVAADGLIQYTVFRRAHDARKRADIKLTYIVDVEVADEAAALKRLADVPHC GVTPDMAYKFVARAPAQMTAPRPVVIGMGPCGLFAGLILAQMGFRPIILERGKAVRERTKDTFGLWRKSVLNPESNVQFG EGGAGTFSDGKLYSQIKDPKHYGRKVLDEFVRAGAPEDILYLSRPHIGTFRLVSMVEKMRATIHELGGEVRFETRVDDIE IDQGKVRGLKLSTGETLRCDHVVLAVGHSARDTFQMLNDRGVYIEAKPFSLGFRIEHPQGLIDRSRFGKFAGHKQLGAAD YKVVHHCSNGRTVYSFCMCPGGTVVAATSEPGRVVTNGMSQYSRAERNANAGIVVGITPDDYPGGPLAGIAFQRKWEERA FELGGGNYMAPGQLVGDFIAGRPSTSLGSVVPSYKPGVHPTDLSTALPDYVIEAIREALPQMDKKIAGFAMHDAVLTGVE TRTSSPIRVRRRDDYQSMNVEGLYPAGEGAGYAGGIYSAAIDGIEVAEALALKMTGAQAA
Specific function: Unknown
COG id: COG2509
COG function: function code R; Uncharacterized FAD-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 58528; Mature: 58528
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRLSEIKLPLDHPESALEAAVRARLAELGVAADGLIQYTVFRRAHDARKRADIKLTYIV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEE DVEVADEAAALKRLADVPHCGVTPDMAYKFVARAPAQMTAPRPVVIGMGPCGLFAGLILA EEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHCCCCCEEEEECCHHHHHHHHHHH QMGFRPIILERGKAVRERTKDTFGLWRKSVLNPESNVQFGEGGAGTFSDGKLYSQIKDPK HHCCCEEEHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCHHHHHHCCHH HYGRKVLDEFVRAGAPEDILYLSRPHIGTFRLVSMVEKMRATIHELGGEVRFETRVDDIE HHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEE IDQGKVRGLKLSTGETLRCDHVVLAVGHSARDTFQMLNDRGVYIEAKPFSLGFRIEHPQG ECCCCEEEEEECCCCCEEECEEEEEECCCHHHHHHHHCCCCEEEEECCCEEEEEEECCCC LIDRSRFGKFAGHKQLGAADYKVVHHCSNGRTVYSFCMCPGGTVVAATSEPGRVVTNGMS HHHHHHHHHHCCCCCCCCCCEEHEEECCCCCEEEEEEECCCCEEEEECCCCCCHHHHHHH QYSRAERNANAGIVVGITPDDYPGGPLAGIAFQRKWEERAFELGGGNYMAPGQLVGDFIA HHHHHHCCCCCCEEEEECCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHC GRPSTSLGSVVPSYKPGVHPTDLSTALPDYVIEAIREALPQMDKKIAGFAMHDAVLTGVE CCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TRTSSPIRVRRRDDYQSMNVEGLYPAGEGAGYAGGIYSAAIDGIEVAEALALKMTGAQAA CCCCCCEEEEECCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLRLSEIKLPLDHPESALEAAVRARLAELGVAADGLIQYTVFRRAHDARKRADIKLTYIV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEE DVEVADEAAALKRLADVPHCGVTPDMAYKFVARAPAQMTAPRPVVIGMGPCGLFAGLILA EEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHCCCCCEEEEECCHHHHHHHHHHH QMGFRPIILERGKAVRERTKDTFGLWRKSVLNPESNVQFGEGGAGTFSDGKLYSQIKDPK HHCCCEEEHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCHHHHHHCCHH HYGRKVLDEFVRAGAPEDILYLSRPHIGTFRLVSMVEKMRATIHELGGEVRFETRVDDIE HHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEE IDQGKVRGLKLSTGETLRCDHVVLAVGHSARDTFQMLNDRGVYIEAKPFSLGFRIEHPQG ECCCCEEEEEECCCCCEEECEEEEEECCCHHHHHHHHCCCCEEEEECCCEEEEEEECCCC LIDRSRFGKFAGHKQLGAADYKVVHHCSNGRTVYSFCMCPGGTVVAATSEPGRVVTNGMS HHHHHHHHHHCCCCCCCCCCEEHEEECCCCCEEEEEEECCCCEEEEECCCCCCHHHHHHH QYSRAERNANAGIVVGITPDDYPGGPLAGIAFQRKWEERAFELGGGNYMAPGQLVGDFIA HHHHHHCCCCCCEEEEECCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHC GRPSTSLGSVVPSYKPGVHPTDLSTALPDYVIEAIREALPQMDKKIAGFAMHDAVLTGVE CCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TRTSSPIRVRRRDDYQSMNVEGLYPAGEGAGYAGGIYSAAIDGIEVAEALALKMTGAQAA CCCCCCEEEEECCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8396545 [H]