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The map label for this gene is ccsA [H]

Identifier: 91785431

GI number: 91785431

Start: 4491020

End: 4492231

Strand: Reverse

Name: ccsA [H]

Synonym: Bxe_A0348

Alternate gene names: 91785431

Gene position: 4492231-4491020 (Counterclockwise)

Preceding gene: 91785432

Following gene: 91785430

Centisome position: 91.76

GC content: 63.53

Gene sequence:

>1212_bases
ATGGACTTGACTCAGGTTTCCTCATCCTCTTCTTCACCCTCGCGGCCCAGGAAAGCGCCCGCCGGTGAAGTGCCCAACGT
CGCGCAGTACGACGAGCGGCCGTTCCTGAAACGGCTCGGCGTTGTCGACTGGCTGTTTGCCGTCGCGATGGTCGCGGGCG
CCGGGTTTGCGCTGTCGCGCTATCACCCGTTCATGAACTACTACGACAAGCTGGTGCTGGTGTGCGCGGTGCCGGTGTTC
ATGGTGCTCGGCTGGCGCTGGAAACCGGTGCGTCCGCTGATGGTGGGGATCACGGCGCTGTCGCTGCTGGCCATCCAGAT
CTACCACGGCGACCTCAGCCGCGCGGATAACGCATTCTTCCTGAAGTATTTCCTGTCGAGCCAGTCCGCGATCCTGTGGA
TGAGCGCGCTCTTCGTGTTCGCCACCGTGTTCTACTGGATCGGCCTGCTGTCGCGCTCGCCGACCGGCGCGGCGATCGGC
TCGAAGATGACGTGGGCGGCGGTGCTGATGGGCTTTGTCGGCCTGATGGTGCGCTGGTACGAGTCGTACCTGATCGGCGC
GGACGTCGGCCATATTCCCATCTCGAACCTGTACGAAGTGTTCGTGCTGTTCAGCCTGATCACCGCGCTGTTCTATCTGT
ACTACGAGCAGCACTACAACACTCGCGCGCTCGGCGCGTTCGTGCTGCTGGTCATCAGCGCCGCGGTCGGCTTCCTGATG
TGGTACTCGGTGGCGCGCGACGCGCAGCAGATCCAGCCGCTCGTTCCGGCGCTGCAAAGCTGGTGGATGAAGATTCACGT
GCCGGCCAACTTCATCGGTTATGGCAGCTTCGCGCTGTCGGCTATGGTGGGCGTCGCGTATCTGGCCAAAGAGCGTGGCG
TGCTGGCCGACCGCCTGCCGGCGCTCGAAGTGCTCGACGACGTGATGTACAAATCCATCGCCGTCGGTTTTGCGTTCTTC
ACGATCGCGACGATTCTCGGCGCGCTGTGGGCCGCTGAAGCCTGGGGCGGCTACTGGAGCTGGGACCCGAAGGAAACGTG
GGCGCTGATCGTCTGGCTGAACTATGCGGCCTGGCTGCATATGCGTCTGATGAAGGGGCTGCGCGGCGCGGTGGCGGCGT
GGTGGGCGTTGACCGGGCTGCTGGTCACGACCTTCGCGTTCCTCGGCGTCAACATGTTCCTGTCGGGCCTGCATAGCTAC
GGCAAGCTGTAA

Upstream 100 bases:

>100_bases
GCCAAACTGGCTGAAGCATCCGACGCCGCCAGCGCCTCCGCCAAATCCGGCAACGCCGGCGCGCCGTCCGCAAGCTCACA
CGATTCGACCCGGTAAGATC

Downstream 100 bases:

>100_bases
GAAAGATCTGCCGCTCTGAACCGATGCAAAACCGCCGTGTGCTTCGCACCGGCGGTTTTTTTGTGGCCGATGGAATATTG
CTGCATCCAGAGTGTTCGCT

Product: cytochrome c assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MDLTQVSSSSSSPSRPRKAPAGEVPNVAQYDERPFLKRLGVVDWLFAVAMVAGAGFALSRYHPFMNYYDKLVLVCAVPVF
MVLGWRWKPVRPLMVGITALSLLAIQIYHGDLSRADNAFFLKYFLSSQSAILWMSALFVFATVFYWIGLLSRSPTGAAIG
SKMTWAAVLMGFVGLMVRWYESYLIGADVGHIPISNLYEVFVLFSLITALFYLYYEQHYNTRALGAFVLLVISAAVGFLM
WYSVARDAQQIQPLVPALQSWWMKIHVPANFIGYGSFALSAMVGVAYLAKERGVLADRLPALEVLDDVMYKSIAVGFAFF
TIATILGALWAAEAWGGYWSWDPKETWALIVWLNYAAWLHMRLMKGLRGAVAAWWALTGLLVTTFAFLGVNMFLSGLHSY
GKL

Sequences:

>Translated_403_residues
MDLTQVSSSSSSPSRPRKAPAGEVPNVAQYDERPFLKRLGVVDWLFAVAMVAGAGFALSRYHPFMNYYDKLVLVCAVPVF
MVLGWRWKPVRPLMVGITALSLLAIQIYHGDLSRADNAFFLKYFLSSQSAILWMSALFVFATVFYWIGLLSRSPTGAAIG
SKMTWAAVLMGFVGLMVRWYESYLIGADVGHIPISNLYEVFVLFSLITALFYLYYEQHYNTRALGAFVLLVISAAVGFLM
WYSVARDAQQIQPLVPALQSWWMKIHVPANFIGYGSFALSAMVGVAYLAKERGVLADRLPALEVLDDVMYKSIAVGFAFF
TIATILGALWAAEAWGGYWSWDPKETWALIVWLNYAAWLHMRLMKGLRGAVAAWWALTGLLVTTFAFLGVNMFLSGLHSY
GKL
>Mature_403_residues
MDLTQVSSSSSSPSRPRKAPAGEVPNVAQYDERPFLKRLGVVDWLFAVAMVAGAGFALSRYHPFMNYYDKLVLVCAVPVF
MVLGWRWKPVRPLMVGITALSLLAIQIYHGDLSRADNAFFLKYFLSSQSAILWMSALFVFATVFYWIGLLSRSPTGAAIG
SKMTWAAVLMGFVGLMVRWYESYLIGADVGHIPISNLYEVFVLFSLITALFYLYYEQHYNTRALGAFVLLVISAAVGFLM
WYSVARDAQQIQPLVPALQSWWMKIHVPANFIGYGSFALSAMVGVAYLAKERGVLADRLPALEVLDDVMYKSIAVGFAFF
TIATILGALWAAEAWGGYWSWDPKETWALIVWLNYAAWLHMRLMKGLRGAVAAWWALTGLLVTTFAFLGVNMFLSGLHSY
GKL

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR017562 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 45002; Mature: 45002

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA