Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

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The map label for this gene is ccsB [H]

Identifier: 91785432

GI number: 91785432

Start: 4492236

End: 4494458

Strand: Reverse

Name: ccsB [H]

Synonym: Bxe_A0347

Alternate gene names: 91785432

Gene position: 4494458-4492236 (Counterclockwise)

Preceding gene: 91785433

Following gene: 91785431

Centisome position: 91.8

GC content: 62.53

Gene sequence:

>2223_bases
ATGAGCGTCACCACGTCGGGTTTGCAGTCGAAGTCGGGCAATCGCATTACGCGCAGCGTCATCGAAGTCTTGAGTTCGAT
GCGTTTTGCCATTTCGTTGCTCGTGATTCTGTCGATCGCCAGCATCATCGGCACCGTCCTTACGCAGGACGATCCGTACC
CCAACTACGTCAATCAGTTTGGCCCGTTCTGGGCGGACATCTTCCGCTCGCTCAGCCTGTACACGGTGTACAGCTCGTGG
TGGTTCATGCTGATCCTCGGCTTCCTGATGGTGTCGGTGTCGCTCTGCGTGATCCGTAATGCGCCGAAAATGGTCGCCGA
CGCGAAGAGCTGGAAAGACAAGGTCCGCGAAGGCAGCCTGCGCGCGTTCCATCACAAAGGCGAGTTCGCGGTGCAGGGCA
CGCGCGCGCAGACCTCGGCCGTGCTCGCCAGACTCTCGGCCAGGCTCGGCTACAAGTTCGTCACACGTGAGTCCGACGGC
GCGACCTTGATCGCCGCCAAACGCGGCGCGCTGACCAGGTTCGGCTACATTTCGGCTCACCTGGCGATCGTGGTGATCTG
CCTCGGCGGTCTGCTCGACAGCAATCTGCCGATCAAGCTGCAAATGTGGCTGTTCGACAAGTCGCCGATCCGCGCCAACA
CGGTGATCAATGACATTCCGCCGGAACATCGTCTGTCGCAATCGAACCCGACGTTCCGCGGCTACGCGTGGGTGCCGGAA
GGGCAGCACGTTTCCACGGCGATCCTGAACCAGCCGGACGGCTCGCTGATCCAGGACCTGCCGTTTTCGATCGAGCTGAA
CAAGTTCATCGTCGATTACTACTCGACGGGCATGCCGAAGCTGTTCGCGAGCGACATCGTCGTGGTGGATCACAAGACCG
GCGCGCGCGTGCCGGCTCGCGTCGAAGTGAACAAGCCGTTCACTTACGACGGCGTGTCGATCTATCAATCGAGCTTCCAG
GACGGCGGCTCGCAAATGCAGATGACGGCCTACCCGATGAGCGGCGCCAGCGCGAAGACCGCGCCGTTCGGCGGCACGAT
CGGCGGCAATGCGCCGTTGAGCTCGGCCACGCCGCTTGCCGATGGCCAGACGGTGGAATTCACCGATTTCCGCGCGATCA
ACGTCGAAAACATCCAGAACGGCAGCGGCCAGACCGACGCCCGCGGCGTCGCGGCGCACCGCACGCTGAAAGAAGCGTTC
GACGAGCGCCTCGGCTCCGGCGCGAAAACCTCGAAGCCGCTCGATCTGCACAACGTCGGCCCGTCGGTGCAATACAAGGT
GCGCGACAAGGACGGCCAGGCGCGCGAATACAACAATTACATGCTGCCGGTCGACGTGTCCGGCGAAAAGATGTTCCTCG
CCGGCATGCGCATGAATCCGGACGATCCGTTCCGCTACCTGCGCATTCCGGCCGACAGCGGCGGCACGGTCAAGGAGTGG
ATGAATCTGCGCGCCACGCTCGAGGATCCGGCCATGCGCGCCTCGGCCGCTCACCGTTTCGCGCTGCGCTCGGTGCCCGG
CGCGAATGCCGAACTGCAACAGCATCTCGAAGAAAGCGCGCTGCGCGTGCTGACCCTTTTTGCGGGCGCGGATAACGGGA
TCAAGATGCCGAACGGCCAGGCGGTCGGCGGCTTCCAGGCCATCGCCGGTTTTATCGACCATTCGGTGCCGAAGGGCGAA
CAGGAAAAGGCCGCCGGCCTGCTGCTGCGCATGCTCGAAGGCTCCACGTGGGATCTATACCAACTGTCCCGCCAGCAGCT
CGGCGAGCCCGAGGCAACGCCCAATGCGGACGCCAGCCGCTTCATCCAGAGCTCGATCAATGCGATATCCGACAGCTTTC
TGTATGGATCGCCGGTCTACCTGCAACTCGACTCCTTCAAGCAGGTGCAAGCCTCGGTATTTCAGCTGACGCGCGCGCCG
GGCAAAAAAGTCGTGTATCTTGGCAGCCTGCTCCTCGTGTTAGGCATCTTTTCGATGTTCTACGTCCGCGAACGGCGCCT
CTGGTTCTGGCTTAAAGATACCGACCACGGCACAAATGTCGTGATGGCGATGTCGAGCGCGCGTAAAACGCTCGACTTCG
AGAAAGAGTTCGTCCAGACACGCGACGCCGTGGGCGCCGCGCTGGGCGCCAAACTGGCTGAAGCATCCGACGCCGCCAGC
GCCTCCGCCAAATCCGGCAACGCCGGCGCGCCGTCCGCAAGCTCACACGATTCGACCCGGTAA

Upstream 100 bases:

>100_bases
TGCAACCGGTCCGGCGAGGCCGGTACAAAACAAGAAAAGGGTGGGGGCGTCGTGCCTGCGACAGCCCTTCACCCTTTTTT
GCTGTTCAGTCGGAGCATGA

Downstream 100 bases:

>100_bases
GATCATGGACTTGACTCAGGTTTCCTCATCCTCTTCTTCACCCTCGCGGCCCAGGAAAGCGCCCGCCGGTGAAGTGCCCA
ACGTCGCGCAGTACGACGAG

Product: cytochrome C biogenesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 740; Mature: 739

Protein sequence:

>740_residues
MSVTTSGLQSKSGNRITRSVIEVLSSMRFAISLLVILSIASIIGTVLTQDDPYPNYVNQFGPFWADIFRSLSLYTVYSSW
WFMLILGFLMVSVSLCVIRNAPKMVADAKSWKDKVREGSLRAFHHKGEFAVQGTRAQTSAVLARLSARLGYKFVTRESDG
ATLIAAKRGALTRFGYISAHLAIVVICLGGLLDSNLPIKLQMWLFDKSPIRANTVINDIPPEHRLSQSNPTFRGYAWVPE
GQHVSTAILNQPDGSLIQDLPFSIELNKFIVDYYSTGMPKLFASDIVVVDHKTGARVPARVEVNKPFTYDGVSIYQSSFQ
DGGSQMQMTAYPMSGASAKTAPFGGTIGGNAPLSSATPLADGQTVEFTDFRAINVENIQNGSGQTDARGVAAHRTLKEAF
DERLGSGAKTSKPLDLHNVGPSVQYKVRDKDGQAREYNNYMLPVDVSGEKMFLAGMRMNPDDPFRYLRIPADSGGTVKEW
MNLRATLEDPAMRASAAHRFALRSVPGANAELQQHLEESALRVLTLFAGADNGIKMPNGQAVGGFQAIAGFIDHSVPKGE
QEKAAGLLLRMLEGSTWDLYQLSRQQLGEPEATPNADASRFIQSSINAISDSFLYGSPVYLQLDSFKQVQASVFQLTRAP
GKKVVYLGSLLLVLGIFSMFYVRERRLWFWLKDTDHGTNVVMAMSSARKTLDFEKEFVQTRDAVGAALGAKLAEASDAAS
ASAKSGNAGAPSASSHDSTR

Sequences:

>Translated_740_residues
MSVTTSGLQSKSGNRITRSVIEVLSSMRFAISLLVILSIASIIGTVLTQDDPYPNYVNQFGPFWADIFRSLSLYTVYSSW
WFMLILGFLMVSVSLCVIRNAPKMVADAKSWKDKVREGSLRAFHHKGEFAVQGTRAQTSAVLARLSARLGYKFVTRESDG
ATLIAAKRGALTRFGYISAHLAIVVICLGGLLDSNLPIKLQMWLFDKSPIRANTVINDIPPEHRLSQSNPTFRGYAWVPE
GQHVSTAILNQPDGSLIQDLPFSIELNKFIVDYYSTGMPKLFASDIVVVDHKTGARVPARVEVNKPFTYDGVSIYQSSFQ
DGGSQMQMTAYPMSGASAKTAPFGGTIGGNAPLSSATPLADGQTVEFTDFRAINVENIQNGSGQTDARGVAAHRTLKEAF
DERLGSGAKTSKPLDLHNVGPSVQYKVRDKDGQAREYNNYMLPVDVSGEKMFLAGMRMNPDDPFRYLRIPADSGGTVKEW
MNLRATLEDPAMRASAAHRFALRSVPGANAELQQHLEESALRVLTLFAGADNGIKMPNGQAVGGFQAIAGFIDHSVPKGE
QEKAAGLLLRMLEGSTWDLYQLSRQQLGEPEATPNADASRFIQSSINAISDSFLYGSPVYLQLDSFKQVQASVFQLTRAP
GKKVVYLGSLLLVLGIFSMFYVRERRLWFWLKDTDHGTNVVMAMSSARKTLDFEKEFVQTRDAVGAALGAKLAEASDAAS
ASAKSGNAGAPSASSHDSTR
>Mature_739_residues
SVTTSGLQSKSGNRITRSVIEVLSSMRFAISLLVILSIASIIGTVLTQDDPYPNYVNQFGPFWADIFRSLSLYTVYSSWW
FMLILGFLMVSVSLCVIRNAPKMVADAKSWKDKVREGSLRAFHHKGEFAVQGTRAQTSAVLARLSARLGYKFVTRESDGA
TLIAAKRGALTRFGYISAHLAIVVICLGGLLDSNLPIKLQMWLFDKSPIRANTVINDIPPEHRLSQSNPTFRGYAWVPEG
QHVSTAILNQPDGSLIQDLPFSIELNKFIVDYYSTGMPKLFASDIVVVDHKTGARVPARVEVNKPFTYDGVSIYQSSFQD
GGSQMQMTAYPMSGASAKTAPFGGTIGGNAPLSSATPLADGQTVEFTDFRAINVENIQNGSGQTDARGVAAHRTLKEAFD
ERLGSGAKTSKPLDLHNVGPSVQYKVRDKDGQAREYNNYMLPVDVSGEKMFLAGMRMNPDDPFRYLRIPADSGGTVKEWM
NLRATLEDPAMRASAAHRFALRSVPGANAELQQHLEESALRVLTLFAGADNGIKMPNGQAVGGFQAIAGFIDHSVPKGEQ
EKAAGLLLRMLEGSTWDLYQLSRQQLGEPEATPNADASRFIQSSINAISDSFLYGSPVYLQLDSFKQVQASVFQLTRAPG
KKVVYLGSLLLVLGIFSMFYVRERRLWFWLKDTDHGTNVVMAMSSARKTLDFEKEFVQTRDAVGAALGAKLAEASDAASA
SAKSGNAGAPSASSHDSTR

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG1333

COG function: function code O; ResB protein required for cytochrome c biosynthesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccs1/ccsB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007816 [H]

Pfam domain/function: PF05140 ResB [H]

EC number: NA

Molecular weight: Translated: 80656; Mature: 80524

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVTTSGLQSKSGNRITRSVIEVLSSMRFAISLLVILSIASIIGTVLTQDDPYPNYVNQF
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHC
GPFWADIFRSLSLYTVYSSWWFMLILGFLMVSVSLCVIRNAPKMVADAKSWKDKVREGSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
RAFHHKGEFAVQGTRAQTSAVLARLSARLGYKFVTRESDGATLIAAKRGALTRFGYISAH
EEEECCCCEEEECCCHHHHHHHHHHHHHCCEEEEEECCCCCEEEEECCCCHHHHHHHHHH
LAIVVICLGGLLDSNLPIKLQMWLFDKSPIRANTVINDIPPEHRLSQSNPTFRGYAWVPE
HHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEECCCCCHHHCCCCCCCCEEEEECCC
GQHVSTAILNQPDGSLIQDLPFSIELNKFIVDYYSTGMPKLFASDIVVVDHKTGARVPAR
CCCCEEHEECCCCCCHHHCCCCEEEHHHHHHHHHHCCCCHHHHCCEEEEECCCCCCCCEE
VEVNKPFTYDGVSIYQSSFQDGGSQMQMTAYPMSGASAKTAPFGGTIGGNAPLSSATPLA
EECCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DGQTVEFTDFRAINVENIQNGSGQTDARGVAAHRTLKEAFDERLGSGAKTSKPLDLHNVG
CCCEEEECCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PSVQYKVRDKDGQAREYNNYMLPVDVSGEKMFLAGMRMNPDDPFRYLRIPADSGGTVKEW
CCEEEEEECCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCEEEEEEECCCCCCHHHH
MNLRATLEDPAMRASAAHRFALRSVPGANAELQQHLEESALRVLTLFAGADNGIKMPNGQ
HHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCC
AVGGFQAIAGFIDHSVPKGEQEKAAGLLLRMLEGSTWDLYQLSRQQLGEPEATPNADASR
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHH
FIQSSINAISDSFLYGSPVYLQLDSFKQVQASVFQLTRAPGKKVVYLGSLLLVLGIFSMF
HHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHH
YVRERRLWFWLKDTDHGTNVVMAMSSARKTLDFEKEFVQTRDAVGAALGAKLAEASDAAS
HHHHCEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHC
ASAKSGNAGAPSASSHDSTR
CCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SVTTSGLQSKSGNRITRSVIEVLSSMRFAISLLVILSIASIIGTVLTQDDPYPNYVNQF
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHC
GPFWADIFRSLSLYTVYSSWWFMLILGFLMVSVSLCVIRNAPKMVADAKSWKDKVREGSL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
RAFHHKGEFAVQGTRAQTSAVLARLSARLGYKFVTRESDGATLIAAKRGALTRFGYISAH
EEEECCCCEEEECCCHHHHHHHHHHHHHCCEEEEEECCCCCEEEEECCCCHHHHHHHHHH
LAIVVICLGGLLDSNLPIKLQMWLFDKSPIRANTVINDIPPEHRLSQSNPTFRGYAWVPE
HHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEECCCCCHHHCCCCCCCCEEEEECCC
GQHVSTAILNQPDGSLIQDLPFSIELNKFIVDYYSTGMPKLFASDIVVVDHKTGARVPAR
CCCCEEHEECCCCCCHHHCCCCEEEHHHHHHHHHHCCCCHHHHCCEEEEECCCCCCCCEE
VEVNKPFTYDGVSIYQSSFQDGGSQMQMTAYPMSGASAKTAPFGGTIGGNAPLSSATPLA
EECCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DGQTVEFTDFRAINVENIQNGSGQTDARGVAAHRTLKEAFDERLGSGAKTSKPLDLHNVG
CCCEEEECCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PSVQYKVRDKDGQAREYNNYMLPVDVSGEKMFLAGMRMNPDDPFRYLRIPADSGGTVKEW
CCEEEEEECCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCEEEEEEECCCCCCHHHH
MNLRATLEDPAMRASAAHRFALRSVPGANAELQQHLEESALRVLTLFAGADNGIKMPNGQ
HHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCC
AVGGFQAIAGFIDHSVPKGEQEKAAGLLLRMLEGSTWDLYQLSRQQLGEPEATPNADASR
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHH
FIQSSINAISDSFLYGSPVYLQLDSFKQVQASVFQLTRAPGKKVVYLGSLLLVLGIFSMF
HHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHH
YVRERRLWFWLKDTDHGTNVVMAMSSARKTLDFEKEFVQTRDAVGAALGAKLAEASDAAS
HHHHCEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHC
ASAKSGNAGAPSASSHDSTR
CCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 14621292 [H]