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The map label for this gene is ychE [H]

Identifier: 91785378

GI number: 91785378

Start: 4435922

End: 4436542

Strand: Reverse

Name: ychE [H]

Synonym: Bxe_A0401

Alternate gene names: 91785378

Gene position: 4436542-4435922 (Counterclockwise)

Preceding gene: 91785379

Following gene: 91785377

Centisome position: 90.62

GC content: 59.9

Gene sequence:

>621_bases
ATGGACATTCTGAAGTCGTTTATTTCGCTGCTGGCGTTGATCAACCCGGTCGGCGCCATCCCGTTCTTCATGAGCCTGAC
AGCGCATCAGAGCGACGCCGAGCGGCGTAGAACCATCCGGATCGCGGCCATTTCGGTGTTCTGCGTGATTGCGGTGACCA
CGCTGCTCGGGCAGCAGATCATCGCCTTCTTCGGCATTTCGGTCGGCTCGCTCGAAGTGGGCGGCGGGATCATCATGCTG
CTGATGGCGATCAACATGCTGAACGCGCAGATCGGCAACAGCCGTTCCACGCCGGAAGAGCGCCACGAAGCGGAGCAGAA
GGACAACATCGCGGTCGTGCCGCTGGCGATTCCGTTGTTGACCGGTCCGGGCGCGATCAGTACTACGATCATCTATGCGG
CCGGCTCGGCGCATTGGTACGACCGGATCAGCCTCGTCGCGATCGGCGCGGTATTGGCGGCGATCTGCTTTTTTTCGCTG
CGCCTTGCCGAACCGATTGCCCGCTGGGTGGGTCGCACGGGTATCAACATCGGCACGCGGCTCATGGGTTTGATGTTATC
GGCGCTGGCGGTGGAATTCATCGTCGATGGATTGAAGGCATTGCTGCCTAATTTGAAATGA

Upstream 100 bases:

>100_bases
TCCGTCGACCAAGGGCAGCCTTTAAGCGCTCACCAGCCGGCTCATCGGCCTATTTACCTGGACCGGGACCGGCGCCGTTT
GCGCTCGCGCCCGGTGTGCG

Downstream 100 bases:

>100_bases
AAACTTCGATAGCGATTGTGGATTACGGAATGGGCAACCTGCGTTCGGTTGCCCAGGCGCTGCGCAAAGCCGCGCCGGAA
GCGGATGTGGCGATCGTCGA

Product: MarC family multiple antibiotic resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MDILKSFISLLALINPVGAIPFFMSLTAHQSDAERRRTIRIAAISVFCVIAVTTLLGQQIIAFFGISVGSLEVGGGIIML
LMAINMLNAQIGNSRSTPEERHEAEQKDNIAVVPLAIPLLTGPGAISTTIIYAAGSAHWYDRISLVAIGAVLAAICFFSL
RLAEPIARWVGRTGINIGTRLMGLMLSALAVEFIVDGLKALLPNLK

Sequences:

>Translated_206_residues
MDILKSFISLLALINPVGAIPFFMSLTAHQSDAERRRTIRIAAISVFCVIAVTTLLGQQIIAFFGISVGSLEVGGGIIML
LMAINMLNAQIGNSRSTPEERHEAEQKDNIAVVPLAIPLLTGPGAISTTIIYAAGSAHWYDRISLVAIGAVLAAICFFSL
RLAEPIARWVGRTGINIGTRLMGLMLSALAVEFIVDGLKALLPNLK
>Mature_206_residues
MDILKSFISLLALINPVGAIPFFMSLTAHQSDAERRRTIRIAAISVFCVIAVTTLLGQQIIAFFGISVGSLEVGGGIIML
LMAINMLNAQIGNSRSTPEERHEAEQKDNIAVVPLAIPLLTGPGAISTTIIYAAGSAHWYDRISLVAIGAVLAAICFFSL
RLAEPIARWVGRTGINIGTRLMGLMLSALAVEFIVDGLKALLPNLK

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=207, Percent_Identity=41.5458937198068, Blast_Score=160, Evalue=7e-41,
Organism=Escherichia coli, GI1787809, Length=195, Percent_Identity=32.8205128205128, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1789842, Length=201, Percent_Identity=29.8507462686567, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 21967; Mature: 21967

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDILKSFISLLALINPVGAIPFFMSLTAHQSDAERRRTIRIAAISVFCVIAVTTLLGQQI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAFFGISVGSLEVGGGIIMLLMAINMLNAQIGNSRSTPEERHEAEQKDNIAVVPLAIPLL
HHHHCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEEEEHHHHH
TGPGAISTTIIYAAGSAHWYDRISLVAIGAVLAAICFFSLRLAEPIARWVGRTGINIGTR
CCCCHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LMGLMLSALAVEFIVDGLKALLPNLK
HHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDILKSFISLLALINPVGAIPFFMSLTAHQSDAERRRTIRIAAISVFCVIAVTTLLGQQI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAFFGISVGSLEVGGGIIMLLMAINMLNAQIGNSRSTPEERHEAEQKDNIAVVPLAIPLL
HHHHCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEEEEHHHHH
TGPGAISTTIIYAAGSAHWYDRISLVAIGAVLAAICFFSLRLAEPIARWVGRTGINIGTR
CCCCHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LMGLMLSALAVEFIVDGLKALLPNLK
HHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2015910; 9097039; 9278503 [H]