| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is hisA [H]
Identifier: 91785376
GI number: 91785376
Start: 4434317
End: 4435069
Strand: Reverse
Name: hisA [H]
Synonym: Bxe_A0403
Alternate gene names: 91785376
Gene position: 4435069-4434317 (Counterclockwise)
Preceding gene: 91785377
Following gene: 91785375
Centisome position: 90.59
GC content: 63.48
Gene sequence:
>753_bases ATGCTGCTGATTCCCGCCATCGACCTGAAAGACGGTCAGTGTGTACGCCTCAAACAGGGCGATATGGACCAGGCGACGAT ATTTTCCGAGGAACCGGCGGCGATGGCCCGACATTGGGTCGATCGCGGGGCCCGGCGTCTGCACCTCGTCGACCTGAATG GCGCGTTCGCCGGCAAGCCGAAGAACGAAGACGCGATTCGCGCGATCATCGCAGAGGTGGGCGGCGAGATTCCCGTTCAG CTGGGCGGCGGCATTCGCGACCTGAACACGATCGAGCGCTATCTGGACGACGGTCTGTCGTACGTGATCATCGGCACGGC GGCGGTGAAGAATCCCGGCTTTCTGCAAGATGCCTGCACGGCGTTCGGCGGCCATATCATCGTGGGGCTGGATGCGAAAG ACGGCAAGGTCGCGACCGACGGCTGGAGCAAGCTCACCGGCCACGAAGTGGCCGACCTCGCGCGCAAGTTCGAGGACTAC GGCTGCGAGTCGATCATCTATACCGACATCGGCCGTGACGGCATGCTGCAGGGCATCAACATCGAAGCGACGGTGCGTCT CGCGCGCGCGGTGAAGATTCCGGTGATCGCGAGCGGCGGCTTGTCGAACCTTGCGGACATCGAATCGCTGTGCGAAGTCG AAGACGAAGGCATCGAAGGCGTGATCTGCGGGCGGGCCATCTACTCGGGCGATCTCGACTTCGCGGCGGCGCAAACCCTC GCGGACCGGCTGCGCGAATCGGACGACGCTTAA
Upstream 100 bases:
>100_bases GAAAGAGTTGTACTAAACTAGCGAAACGGCGTCCCGGCGGGCTGAACCCTCAGCCGCTCGCGCCGACCTTCAACCCCTTC CCAGACAACACCCGATTGCT
Downstream 100 bases:
>100_bases AACGGGGAGGCGGGGTCGGCAGGCTTGCCGCTCGCGCCTCGTGCGTTCGGCGTCGCGGCGAGCGAATCGCCGGCGTCCGA GCGGCGCGGCCTGACACCGG
Product: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [H]
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MLLIPAIDLKDGQCVRLKQGDMDQATIFSEEPAAMARHWVDRGARRLHLVDLNGAFAGKPKNEDAIRAIIAEVGGEIPVQ LGGGIRDLNTIERYLDDGLSYVIIGTAAVKNPGFLQDACTAFGGHIIVGLDAKDGKVATDGWSKLTGHEVADLARKFEDY GCESIIYTDIGRDGMLQGINIEATVRLARAVKIPVIASGGLSNLADIESLCEVEDEGIEGVICGRAIYSGDLDFAAAQTL ADRLRESDDA
Sequences:
>Translated_250_residues MLLIPAIDLKDGQCVRLKQGDMDQATIFSEEPAAMARHWVDRGARRLHLVDLNGAFAGKPKNEDAIRAIIAEVGGEIPVQ LGGGIRDLNTIERYLDDGLSYVIIGTAAVKNPGFLQDACTAFGGHIIVGLDAKDGKVATDGWSKLTGHEVADLARKFEDY GCESIIYTDIGRDGMLQGINIEATVRLARAVKIPVIASGGLSNLADIESLCEVEDEGIEGVICGRAIYSGDLDFAAAQTL ADRLRESDDA >Mature_250_residues MLLIPAIDLKDGQCVRLKQGDMDQATIFSEEPAAMARHWVDRGARRLHLVDLNGAFAGKPKNEDAIRAIIAEVGGEIPVQ LGGGIRDLNTIERYLDDGLSYVIIGTAAVKNPGFLQDACTAFGGHIIVGLDAKDGKVATDGWSKLTGHEVADLARKFEDY GCESIIYTDIGRDGMLQGINIEATVRLARAVKIPVIASGGLSNLADIESLCEVEDEGIEGVICGRAIYSGDLDFAAAQTL ADRLRESDDA
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family [H]
Homologues:
Organism=Escherichia coli, GI87082028, Length=243, Percent_Identity=31.6872427983539, Blast_Score=121, Evalue=4e-29, Organism=Escherichia coli, GI1788336, Length=213, Percent_Identity=25.3521126760563, Blast_Score=65, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 [H]
Pfam domain/function: PF00977 His_biosynth [H]
EC number: =5.3.1.16 [H]
Molecular weight: Translated: 26697; Mature: 26697
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLIPAIDLKDGQCVRLKQGDMDQATIFSEEPAAMARHWVDRGARRLHLVDLNGAFAGKP CEEEEEEECCCCCEEEECCCCCCCCEEECCCHHHHHHHHHHCCCCEEEEEEECCCCCCCC KNEDAIRAIIAEVGGEIPVQLGGGIRDLNTIERYLDDGLSYVIIGTAAVKNPGFLQDACT CCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHH AFGGHIIVGLDAKDGKVATDGWSKLTGHEVADLARKFEDYGCESIIYTDIGRDGMLQGIN HCCCEEEEEEECCCCEEECCCCHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCC IEATVRLARAVKIPVIASGGLSNLADIESLCEVEDEGIEGVICGRAIYSGDLDFAAAQTL HHHHEEEEHHEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCEEECCCCCHHHHHHH ADRLRESDDA HHHHHHCCCC >Mature Secondary Structure MLLIPAIDLKDGQCVRLKQGDMDQATIFSEEPAAMARHWVDRGARRLHLVDLNGAFAGKP CEEEEEEECCCCCEEEECCCCCCCCEEECCCHHHHHHHHHHCCCCEEEEEEECCCCCCCC KNEDAIRAIIAEVGGEIPVQLGGGIRDLNTIERYLDDGLSYVIIGTAAVKNPGFLQDACT CCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCEEEEEEEEECCCCCCHHHHHH AFGGHIIVGLDAKDGKVATDGWSKLTGHEVADLARKFEDYGCESIIYTDIGRDGMLQGIN HCCCEEEEEEECCCCEEECCCCHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCEECCC IEATVRLARAVKIPVIASGGLSNLADIESLCEVEDEGIEGVICGRAIYSGDLDFAAAQTL HHHHEEEEHHEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCEEECCCCCHHHHHHH ADRLRESDDA HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA