| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is hisF [H]
Identifier: 91785375
GI number: 91785375
Start: 4433326
End: 4434099
Strand: Reverse
Name: hisF [H]
Synonym: Bxe_A0404
Alternate gene names: 91785375
Gene position: 4434099-4433326 (Counterclockwise)
Preceding gene: 91785376
Following gene: 91785374
Centisome position: 90.57
GC content: 65.76
Gene sequence:
>774_bases ATGGCTCTAGCTAAACGCATCATCCCCTGTCTCGACGTCACGGCTGGCCGCGTGGTCAAGGGCGTCAACTTCGTCGAACT GCGCGATGCGGGCGACCCGGTCGAAATCGCCCGCCGCTACGACGATCAGGGCGCGGACGAACTCACCTTCCTCGACATCA CCGCCACCTCGGATCAGCGCGATCTGATCCTGCCGATCATCGAAGCGGTCGCCTCGCAGGTGTTCATTCCGCTGACGGTC GGCGGCGGCGTGCGCGCCGTCGAAGACGTGCGGCGCCTGTTGAACGCGGGCGCGGACAAGATCAGCATGAATTCGTCGGC GGTGGCGAATCCGCAGCTCGTGAAAGACGCGACGGACAAATACGGCTCGCAGTGCATCGTGGTCGCGATCGACGCGAAGC GCGTCTCCGCAGAAGGCGAAGTGCCGCGCTGGGAAGTCTTCACGCACGGCGGACGCAAGGCTACCGGGCTGGACGCGGTC GAATGGGCGCGCAAGATGGCCGAACTCGGCGCCGGCGAAATCCTGCTCACCAGCATGGACCGCGACGGCACGAAGAGCGG CTTCGATCTCGCTCTCACGCGCGCCGTGTCCGATGCGGTGCCGATCCCGGTGATCGCCTCGGGCGGCGTGGGCAACCTGC AGCATCTGGCCGACGGCATCAAGGAAGGCCACGCGGACGCGGTACTCGCCGCGAGCATTTTCCACTACGGCGAACACACC GTGGGCGAGGCCAAGCGCTTCATGGCCGATCAGGGCATTTCGGTGAGGTTGTGA
Upstream 100 bases:
>100_bases GTTGCGTGGAACTCACCGGCGGCGCGACTGACCGCGCCGGCATTGTGCCGCTCATCCAGGCGAGCGGCCTCATCAGCGGT ATTGGCAGAATTGCAAGATC
Downstream 100 bases:
>100_bases CGTGGTGAATCCCTCGGCAGTCAATTGGCTCGACAAGGTCAGGTGGGACGCGAACGGCCTCGTGCCGGTGATCGCGCAGG AAGCGTCGACGAACGACGTG
Product: imidazole glycerol phosphate synthase subunit HisF
Products: D-erythro-imidazole-glycerol-phosphate; AICAR; L-glutamate [C]
Alternate protein names: IGP synthase cyclase subunit; IGP synthase subunit hisF; ImGP synthase subunit hisF; IGPS subunit hisF [H]
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MALAKRIIPCLDVTAGRVVKGVNFVELRDAGDPVEIARRYDDQGADELTFLDITATSDQRDLILPIIEAVASQVFIPLTV GGGVRAVEDVRRLLNAGADKISMNSSAVANPQLVKDATDKYGSQCIVVAIDAKRVSAEGEVPRWEVFTHGGRKATGLDAV EWARKMAELGAGEILLTSMDRDGTKSGFDLALTRAVSDAVPIPVIASGGVGNLQHLADGIKEGHADAVLAASIFHYGEHT VGEAKRFMADQGISVRL
Sequences:
>Translated_257_residues MALAKRIIPCLDVTAGRVVKGVNFVELRDAGDPVEIARRYDDQGADELTFLDITATSDQRDLILPIIEAVASQVFIPLTV GGGVRAVEDVRRLLNAGADKISMNSSAVANPQLVKDATDKYGSQCIVVAIDAKRVSAEGEVPRWEVFTHGGRKATGLDAV EWARKMAELGAGEILLTSMDRDGTKSGFDLALTRAVSDAVPIPVIASGGVGNLQHLADGIKEGHADAVLAASIFHYGEHT VGEAKRFMADQGISVRL >Mature_256_residues ALAKRIIPCLDVTAGRVVKGVNFVELRDAGDPVEIARRYDDQGADELTFLDITATSDQRDLILPIIEAVASQVFIPLTVG GGVRAVEDVRRLLNAGADKISMNSSAVANPQLVKDATDKYGSQCIVVAIDAKRVSAEGEVPRWEVFTHGGRKATGLDAVE WARKMAELGAGEILLTSMDRDGTKSGFDLALTRAVSDAVPIPVIASGGVGNLQHLADGIKEGHADAVLAASIFHYGEHTV GEAKRFMADQGISVRL
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the hisH subunit [H]
COG id: COG0107
COG function: function code E; Imidazoleglycerol-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family [H]
Homologues:
Organism=Escherichia coli, GI1788336, Length=259, Percent_Identity=41.6988416988417, Blast_Score=213, Evalue=1e-56, Organism=Escherichia coli, GI87082028, Length=242, Percent_Identity=30.5785123966942, Blast_Score=101, Evalue=4e-23, Organism=Saccharomyces cerevisiae, GI6319725, Length=316, Percent_Identity=34.4936708860759, Blast_Score=169, Evalue=3e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR004651 - InterPro: IPR011060 [H]
Pfam domain/function: PF00977 His_biosynth [H]
EC number: 4.1.3.- [C]
Molecular weight: Translated: 27272; Mature: 27141
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALAKRIIPCLDVTAGRVVKGVNFVELRDAGDPVEIARRYDDQGADELTFLDITATSDQR CCCHHHHHHHHCCCHHHHHCCCCEEEECCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCC DLILPIIEAVASQVFIPLTVGGGVRAVEDVRRLLNAGADKISMNSSAVANPQLVKDATDK CHHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHH YGSQCIVVAIDAKRVSAEGEVPRWEVFTHGGRKATGLDAVEWARKMAELGAGEILLTSMD HCCEEEEEEEECEEECCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEECC RDGTKSGFDLALTRAVSDAVPIPVIASGGVGNLQHLADGIKEGHADAVLAASIFHYGEHT CCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCC VGEAKRFMADQGISVRL HHHHHHHHHCCCCEEEC >Mature Secondary Structure ALAKRIIPCLDVTAGRVVKGVNFVELRDAGDPVEIARRYDDQGADELTFLDITATSDQR CCHHHHHHHHCCCHHHHHCCCCEEEECCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCC DLILPIIEAVASQVFIPLTVGGGVRAVEDVRRLLNAGADKISMNSSAVANPQLVKDATDK CHHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHH YGSQCIVVAIDAKRVSAEGEVPRWEVFTHGGRKATGLDAVEWARKMAELGAGEILLTSMD HCCEEEEEEEECEEECCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEECC RDGTKSGFDLALTRAVSDAVPIPVIASGGVGNLQHLADGIKEGHADAVLAASIFHYGEHT CCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCC VGEAKRFMADQGISVRL HHHHHHHHHCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: phosphoribulosylformimino-AICAR-P; L-glutamine [C]
Specific reaction: phosphoribulosylformimino-AICAR-P + L-glutamine = D-erythro-imidazole-glycerol-phosphate + AICAR + L-glutamate [C]
General reaction: Lyases; Carbon-Nitrogen Lyases; Amidine-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA