| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is tatB
Identifier: 91785369
GI number: 91785369
Start: 4430504
End: 4431031
Strand: Reverse
Name: tatB
Synonym: Bxe_A0410
Alternate gene names: 91785369
Gene position: 4431031-4430504 (Counterclockwise)
Preceding gene: 91785370
Following gene: 91785368
Centisome position: 90.51
GC content: 67.23
Gene sequence:
>528_bases ATGCTGGACCTCGGTCTAACCAAGATGGCGCTGATCGGCGTCGTCGCGCTGGTCGTACTCGGCCCTGAGCGCCTGCCACG CGTCGCCCGCACGGCCGGCGCGCTGTTCGGCCGTGCGCAGCGGTATATCAACGACGTGAAGGCCGAAGTCACGCGCGAAA TCGAGCTCGACGAACTGCGCCGCATGAAAAGCGAGTTCGAGGCAGCCGCGACCAACGTCGAAACCTCCGTTCAGGACAAT CTGCGCAAGCATGAGAGCGAGCTGAACGACGCGTGGAACAGCGGCACGTCGGTGTCGCCGAGCATTGCGGGCGGCGCGCT CGAAGACGTCGGCAATGCAGGCAATACATCGTGGCCCGGCAGCACGCCGGCCGCCGGGGCCAAACGCAAGAACTGGCGCG TCAGGCAGACGGCCATGCCCACCTGGTACAAACGCGCAACCACGCGCCGCACGCGTGTGCAGTCGGGTGCGGCGCGCGTG GCGCGGCATACGCCGGCCACCATGCGTCGTCCGACGCGGTTCTTCTGA
Upstream 100 bases:
>100_bases TAACGGCGCCGTAGATGTGGATGCGAAGGAAAAGGCGCCGCGTTCGGGCGATTACCGCTAAGCCGCGGCTTAACCGCGTT ACTGACGGACATTCCACTTC
Downstream 100 bases:
>100_bases TGATCAGAACGACAATCTCTAACCGAGGGCCGGTGTGAGCGACCCCCAGCAAACCCAGGACGAAGGCACTGAAGAGACCT TCATTTCCCACCTCGTTGAA
Product: sec-independent translocase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MLDLGLTKMALIGVVALVVLGPERLPRVARTAGALFGRAQRYINDVKAEVTREIELDELRRMKSEFEAAATNVETSVQDN LRKHESELNDAWNSGTSVSPSIAGGALEDVGNAGNTSWPGSTPAAGAKRKNWRVRQTAMPTWYKRATTRRTRVQSGAARV ARHTPATMRRPTRFF
Sequences:
>Translated_175_residues MLDLGLTKMALIGVVALVVLGPERLPRVARTAGALFGRAQRYINDVKAEVTREIELDELRRMKSEFEAAATNVETSVQDN LRKHESELNDAWNSGTSVSPSIAGGALEDVGNAGNTSWPGSTPAAGAKRKNWRVRQTAMPTWYKRATTRRTRVQSGAARV ARHTPATMRRPTRFF >Mature_175_residues MLDLGLTKMALIGVVALVVLGPERLPRVARTAGALFGRAQRYINDVKAEVTREIELDELRRMKSEFEAAATNVETSVQDN LRKHESELNDAWNSGTSVSPSIAGGALEDVGNAGNTSWPGSTPAAGAKRKNWRVRQTAMPTWYKRATTRRTRVQSGAARV ARHTPATMRRPTRFF
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG1826
COG function: function code U; Sec-independent protein secretion pathway components
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatB family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TATB_BURXL (Q13TR6)
Other databases:
- EMBL: CP000270 - RefSeq: YP_560575.1 - GeneID: 4006008 - GenomeReviews: CP000270_GR - KEGG: bxe:Bxe_A0410 - HOGENOM: HBG751935 - OMA: GKAQRYV - ProtClustDB: PRK01919 - HAMAP: MF_00237 - InterPro: IPR003369 - InterPro: IPR018448 - InterPro: IPR003998 - PRINTS: PR01506 - TIGRFAMs: TIGR01410
Pfam domain/function: PF02416 MttA_Hcf106
EC number: NA
Molecular weight: Translated: 19275; Mature: 19275
Theoretical pI: Translated: 11.55; Mature: 11.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x19421be0)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDLGLTKMALIGVVALVVLGPERLPRVARTAGALFGRAQRYINDVKAEVTREIELDELR CCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH RMKSEFEAAATNVETSVQDNLRKHESELNDAWNSGTSVSPSIAGGALEDVGNAGNTSWPG HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHCCCCCCCCCC STPAAGAKRKNWRVRQTAMPTWYKRATTRRTRVQSGAARVARHTPATMRRPTRFF CCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCH >Mature Secondary Structure MLDLGLTKMALIGVVALVVLGPERLPRVARTAGALFGRAQRYINDVKAEVTREIELDELR CCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH RMKSEFEAAATNVETSVQDNLRKHESELNDAWNSGTSVSPSIAGGALEDVGNAGNTSWPG HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCHHHHHHCCCCCCCCCC STPAAGAKRKNWRVRQTAMPTWYKRATTRRTRVQSGAARVARHTPATMRRPTRFF CCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA