| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is tatC [H]
Identifier: 91785368
GI number: 91785368
Start: 4429690
End: 4430469
Strand: Reverse
Name: tatC [H]
Synonym: Bxe_A0411
Alternate gene names: 91785368
Gene position: 4430469-4429690 (Counterclockwise)
Preceding gene: 91785369
Following gene: 91785366
Centisome position: 90.49
GC content: 59.62
Gene sequence:
>780_bases GTGAGCGACCCCCAGCAAACCCAGGACGAAGGCACTGAAGAGACCTTCATTTCCCACCTCGTTGAATTGCGCGACCGTAT CATTCGCGCCGGCCTTGCCGTCGTCGTGGTGTTCGTCGGACTCGTGTATTGGGCGCCGGATATCTTCCGGCTGCTGGCGC GGCCGCTGATGCAGAATCTGCCGAAAGACGGCAAGATGATCGTCACGGATGTGACCGGCTCGTTCTTCGTGCCGATGAAG GTGACCATGCTGGTGGCCTTTGTGATCGCACTGCCAATCGTGCTGTATCAGATCTGGGCGTTCGTTGCGCCGGGTCTTTA CCAGCATGAGAAGAAACTGGTCGGGCCGCTGGTGGGCAGCAGCTACACGCTGTTCCTGTGCGGCATGGCGTTCGCGTACT TCGTGGTGTTCCCGACTATTTTCCGCGTGATGGCGCACTACAACGCGCCGCTCGGCGCGGAGATGACCACGGATATCGAC AATTACCTGAGCTTCGTGCTGACCATGTTCATCGCGTTCGGCGTGACGTTCGAAGTGCCGATCGTCGTGGTGCTGCTGGT CCGCATGAACGTGGTGACGCTCAAGAAGCTCAAGGAGATTCGTCCGTATGTGATCGTGGGCGCCTTTGTCATCTCCGCTG TGGTCACGCCGCCGGACGTGTTCTCGCAGTTGATTCTGGCGATTCCGCTGATCGTGCTTTACGAGGCGGGGATCATTGCG GCGCGGTTGATCGTAGGCAAGCAGCCGGTGGTGATCGAGGATGCGGGTGCGTCGGAGTGA
Upstream 100 bases:
>100_bases TCGGGTGCGGCGCGCGTGGCGCGGCATACGCCGGCCACCATGCGTCGTCCGACGCGGTTCTTCTGATGATCAGAACGACA ATCTCTAACCGAGGGCCGGT
Downstream 100 bases:
>100_bases ACCACCACTATCCGGCCGCAAAGCTGAAAAGCGGCCCTTTCTTCGCAACGGTAGCCAAGTCGCCGTTCAGCGCCAGTGCG CGCGAAACCCTCGGCGGTAG
Product: Sec-independent protein translocase TatC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MSDPQQTQDEGTEETFISHLVELRDRIIRAGLAVVVVFVGLVYWAPDIFRLLARPLMQNLPKDGKMIVTDVTGSFFVPMK VTMLVAFVIALPIVLYQIWAFVAPGLYQHEKKLVGPLVGSSYTLFLCGMAFAYFVVFPTIFRVMAHYNAPLGAEMTTDID NYLSFVLTMFIAFGVTFEVPIVVVLLVRMNVVTLKKLKEIRPYVIVGAFVISAVVTPPDVFSQLILAIPLIVLYEAGIIA ARLIVGKQPVVIEDAGASE
Sequences:
>Translated_259_residues MSDPQQTQDEGTEETFISHLVELRDRIIRAGLAVVVVFVGLVYWAPDIFRLLARPLMQNLPKDGKMIVTDVTGSFFVPMK VTMLVAFVIALPIVLYQIWAFVAPGLYQHEKKLVGPLVGSSYTLFLCGMAFAYFVVFPTIFRVMAHYNAPLGAEMTTDID NYLSFVLTMFIAFGVTFEVPIVVVLLVRMNVVTLKKLKEIRPYVIVGAFVISAVVTPPDVFSQLILAIPLIVLYEAGIIA ARLIVGKQPVVIEDAGASE >Mature_258_residues SDPQQTQDEGTEETFISHLVELRDRIIRAGLAVVVVFVGLVYWAPDIFRLLARPLMQNLPKDGKMIVTDVTGSFFVPMKV TMLVAFVIALPIVLYQIWAFVAPGLYQHEKKLVGPLVGSSYTLFLCGMAFAYFVVFPTIFRVMAHYNAPLGAEMTTDIDN YLSFVLTMFIAFGVTFEVPIVVVLLVRMNVVTLKKLKEIRPYVIVGAFVISAVVTPPDVFSQLILAIPLIVLYEAGIIAA RLIVGKQPVVIEDAGASE
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG0805
COG function: function code U; Sec-independent protein secretion pathway component TatC
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatC family [H]
Homologues:
Organism=Escherichia coli, GI2367313, Length=234, Percent_Identity=51.2820512820513, Blast_Score=255, Evalue=2e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002033 - InterPro: IPR019820 - InterPro: IPR019822 [H]
Pfam domain/function: PF00902 TatC [H]
EC number: NA
Molecular weight: Translated: 28644; Mature: 28512
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPQQTQDEGTEETFISHLVELRDRIIRAGLAVVVVFVGLVYWAPDIFRLLARPLMQNL CCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PKDGKMIVTDVTGSFFVPMKVTMLVAFVIALPIVLYQIWAFVAPGLYQHEKKLVGPLVGS CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC SYTLFLCGMAFAYFVVFPTIFRVMAHYNAPLGAEMTTDIDNYLSFVLTMFIAFGVTFEVP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHH IVVVLLVRMNVVTLKKLKEIRPYVIVGAFVISAVVTPPDVFSQLILAIPLIVLYEAGIIA HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH ARLIVGKQPVVIEDAGASE HHHHHCCCCEEEECCCCCC >Mature Secondary Structure SDPQQTQDEGTEETFISHLVELRDRIIRAGLAVVVVFVGLVYWAPDIFRLLARPLMQNL CCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PKDGKMIVTDVTGSFFVPMKVTMLVAFVIALPIVLYQIWAFVAPGLYQHEKKLVGPLVGS CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC SYTLFLCGMAFAYFVVFPTIFRVMAHYNAPLGAEMTTDIDNYLSFVLTMFIAFGVTFEVP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHH IVVVLLVRMNVVTLKKLKEIRPYVIVGAFVISAVVTPPDVFSQLILAIPLIVLYEAGIIA HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH ARLIVGKQPVVIEDAGASE HHHHHCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]