| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is yihX [C]
Identifier: 91785338
GI number: 91785338
Start: 4399573
End: 4400196
Strand: Reverse
Name: yihX [C]
Synonym: Bxe_A0441
Alternate gene names: 91785338
Gene position: 4400196-4399573 (Counterclockwise)
Preceding gene: 91785339
Following gene: 91785330
Centisome position: 89.88
GC content: 62.98
Gene sequence:
>624_bases ATGGCCATCAAGGCAGTGGTATTCGATTTCGGCGGCGTGCTGATCGACTGGAGCCCTGAGTATCTGTATCGGGAGCTGAT TCCTGACGAGACCGAGCGCCGCTGGTTTCTGACGCACGTCTGTTCGATGGACTGGGTGATCCGTCAGGACGGCGGCCAGC CGATCGTCGAAGCCACCGAGGAACTCGTCACGAAGTTTCCCGATCACGAAACGCTGATCCGCGCGTTCTACGAGCGCTGG CACGAGATGGTGGCCGGCGTGCTCGAAGAGGGCGTGGCAATCATGGAGAAGCTCGAAGCGGCCGGCGTGCCGCTCTTCGG GTTGACCAACTGGTCGGCGGAGACCTTTCCGTATGCGTGGGAGCATTACCCGGTGCTGCGGCGGTTTCGCGACATCGTTG TGTCGGGGCGGGTGGGGCTGGTGAAGCCCGATCCGGCCATCTTCGCAGCCATGCGTGAGCGGATCGAAGCGCAATTGCCT GGCATCGAGCCCGCCGAACTCGTCTTTATCGACGACAACCTGAAGAACGCCGAGGCCGCGACCGCGCTCGGCTGGCACGG CGTGCATCACACCAGCGCCGCGCAAACCGAAGCGAAACTGCGCGAGTTGGGATTGCCGGTTTGA
Upstream 100 bases:
>100_bases ACGCGCCTCGCGCCGCACGTCTCGGGCGAGGCCAAAGCATGGCTGGAGTTGCGCACGCAACCCATCTGATCGCAATCGGG AATCGGCTTACGGAGCGTGC
Downstream 100 bases:
>100_bases CGCCGCGGCGGTTCTAACGGCAAGGCGGCGCGTCAGCCGTTCCAGCGGCGCCGCGTCGCTTCGGTTTATTTAGGCGCGTT TCGTCCCCAACCGACCGGCC
Product: putative L-2-haloalkanoic acid dehalogenase (HAD aspartate-nucleophile hydrolase)
Products: NA
Alternate protein names: HAD-Superfamily Hydrolase; HAD Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Hydrolase; Alpha Beta Hydrolase; HAD Hydrolase Family IA; 2-Haloacid Dehalogenase; Hydrolase Haloacid Dehalogenase-Like Family Protein; Haloacid Dehalogenase Superfamily Protein; Hydrolase Protein; Haloacid Dehalogenase-Like Family Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Hydrolase Protein Haloacid Dehalogenase-Like Family; Haloacid Dehalogenase-Like Hydrolase Protein; HAD Family Phosphatase; HAD Hydrolase Superfamily Protein
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MAIKAVVFDFGGVLIDWSPEYLYRELIPDETERRWFLTHVCSMDWVIRQDGGQPIVEATEELVTKFPDHETLIRAFYERW HEMVAGVLEEGVAIMEKLEAAGVPLFGLTNWSAETFPYAWEHYPVLRRFRDIVVSGRVGLVKPDPAIFAAMRERIEAQLP GIEPAELVFIDDNLKNAEAATALGWHGVHHTSAAQTEAKLRELGLPV
Sequences:
>Translated_207_residues MAIKAVVFDFGGVLIDWSPEYLYRELIPDETERRWFLTHVCSMDWVIRQDGGQPIVEATEELVTKFPDHETLIRAFYERW HEMVAGVLEEGVAIMEKLEAAGVPLFGLTNWSAETFPYAWEHYPVLRRFRDIVVSGRVGLVKPDPAIFAAMRERIEAQLP GIEPAELVFIDDNLKNAEAATALGWHGVHHTSAAQTEAKLRELGLPV >Mature_206_residues AIKAVVFDFGGVLIDWSPEYLYRELIPDETERRWFLTHVCSMDWVIRQDGGQPIVEATEELVTKFPDHETLIRAFYERWH EMVAGVLEEGVAIMEKLEAAGVPLFGLTNWSAETFPYAWEHYPVLRRFRDIVVSGRVGLVKPDPAIFAAMRERIEAQLPG IEPAELVFIDDNLKNAEAATALGWHGVHHTSAAQTEAKLRELGLPV
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23469; Mature: 23338
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIKAVVFDFGGVLIDWSPEYLYRELIPDETERRWFLTHVCSMDWVIRQDGGQPIVEATE CCCEEEEEECCCEEEECCHHHHHHHHCCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHH ELVTKFPDHETLIRAFYERWHEMVAGVLEEGVAIMEKLEAAGVPLFGLTNWSAETFPYAW HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCH EHYPVLRRFRDIVVSGRVGLVKPDPAIFAAMRERIEAQLPGIEPAELVFIDDNLKNAEAA HHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHH TALGWHGVHHTSAAQTEAKLRELGLPV HHHCCCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure AIKAVVFDFGGVLIDWSPEYLYRELIPDETERRWFLTHVCSMDWVIRQDGGQPIVEATE CCEEEEEECCCEEEECCHHHHHHHHCCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHH ELVTKFPDHETLIRAFYERWHEMVAGVLEEGVAIMEKLEAAGVPLFGLTNWSAETFPYAW HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCH EHYPVLRRFRDIVVSGRVGLVKPDPAIFAAMRERIEAQLPGIEPAELVFIDDNLKNAEAA HHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHH TALGWHGVHHTSAAQTEAKLRELGLPV HHHCCCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA