| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is pepQ [H]
Identifier: 91785339
GI number: 91785339
Start: 4400228
End: 4402042
Strand: Reverse
Name: pepQ [H]
Synonym: Bxe_A0440
Alternate gene names: 91785339
Gene position: 4402042-4400228 (Counterclockwise)
Preceding gene: 91785340
Following gene: 91785338
Centisome position: 89.91
GC content: 66.34
Gene sequence:
>1815_bases ATGAATGCCCGACTTCCCGAAACCTCCTCCATTCCCGAACGGCTCGCCACTTTGCGCAACGCAATGGCGCGCGAAGGCGT CGCTGCCTATCTGGTGCCGTCCGCGGACCCACATCTGTCCGAGTATCTGCCAGGGCGCTGGCAAGGCCGGCAGTGGTTGT CGGGCTTCACCGGCTCGGCCGGCACGCTGATCGTCACCGCGGATTTCGCGGGGGTCTGGACGGACAGCCGCTATTGGGAA CAGGCCTACGCGCAACTGGCGGGAACCGGCGTTCAGTTGATGAAGATGACCGGCGGCCAGCAAACCGCGCCGCATTTCGA ATGGCTCGCGCAGAACGTGCCGGCAGGCGGCACGGTCGGCGTGGACGGTGCCGTGCTCGGCGTGGCGGCGGCGCGGGCCT TGAGCCAGGCGCTGAGCGCGCGCGGTGTGCAACTGCGCACCGACGTCGATCTGTTCGACGCGATCTGGCCGCAGCGTCCG TCGCTGCCGGCGGCCGCCGTGTTCGAGCATGCCGCGCCGCACGCGAGCGTCGCCCGTTCGGACAAGCTCGCGCAGATTCG CCGCGCAATGGCGGACAAGGGCGCGCAATGGCATTTCATCTCCACGCTCGACGATCTTGCCTGGCTGCTGAATCTGCGCG GCGCCGACGTCAGCTACAACCCGGTATTCGTGGCGCACGCGCTGATCGGAGTCGATCACGCATCGCTCTTCGTCGCTGAC GGCAAGGTGCCGCAGGCACTGGCCGAGGCGCTGGCGAAAGACAACATCAGCATCGAGCCGTATGCCAAAGCTGCGGACGC GCTGGCCGCGCTGCCCGCCGGCAGCACGCTGCTGATCGACCCGCGCCGCATTACGTTCGGCTCGCTGCAATCCGTGCCGG CCACGGTCAAGGTGATCGAGGCCGTCAATCCGTCCACCTTCTTCAAGTCGCGCAAGACCGCGGCGGAAGCCGGGCATGTG CGCGAGACGATGGAACAGGACGGCGCGGCGCTGGCGGAATTTTTCGCCTGGTTCGAAGGCGCGTTGGGCCGCGAAACGAT CACCGAACTCACTATCGACGAACGTTCGACGGCGGCTCGCGCGCGCCGGCCGGGTTTCGTGTCGCTGAGCTTTGCGACGA TCGCCGGCTTCAACGCGAACGGCGCAATGCCGCATTACCGCGCCACTGAAGAATCGCACTCGGTGATCGAGGGCAACGGC CTGTTGCTGATCGACTCCGGCGCGCAGTATCTGAGCGGCACGACCGACATCACCCGCGTGGTACCCGTCGGCACCATCAG CGAAGAACAGCGGCGCGATTTCACGATCGTGCTCAAGGGCACGATGGCGCTTTCGCGCGCGCACTTTCCGCGCGGTATCC GTTCGCCCATGCTCGACGCAATCGCCCGCGCGCCGATCTGGGAAGCCGGCGCTGATTACGGCCACGGCACCGGTCACGGC GTGGGTTATTTCCTGAACGTGCACGAAGGCCCGCAGGTGATTTCGCACTATGCGCCGGCCGAACCGTGGACCGCGATGGA AGAGGGCATGATCACCTCGGTCGAGCCGGGCATTTACCGTCCGGGCAAATGGGGCGTGCGGATTGAGAACCTCGTGCTGA ACGTGCCAGCCGGCCAGACCGAGTTCGGCGACTTCCTCAAGTTCGAGACGTTGACGCTGTGCCCGATCGACACGCGTTGC CTCGATCTGTCGCTGCTGCGCGAAGACGAACGCGCGTGGCTGAACGCGTATCACGAGACCGTGCGCACGCGCCTCGCGCC GCACGTCTCGGGCGAGGCCAAAGCATGGCTGGAGTTGCGCACGCAACCCATCTGA
Upstream 100 bases:
>100_bases GATACGCTCGAATGGCCGGTATGCACCGCCGTTGCGTTGATCGCCGTTGCCGTGACGGTCGGCTTGCTTTCCCGTCGATG AATATTTGCAGGTGACTCCG
Downstream 100 bases:
>100_bases TCGCAATCGGGAATCGGCTTACGGAGCGTGCATGGCCATCAAGGCAGTGGTATTCGATTTCGGCGGCGTGCTGATCGACT GGAGCCCTGAGTATCTGTAT
Product: putative Xaa-Pro aminopeptidase
Products: NA
Alternate protein names: X-Pro dipeptidase; Imidodipeptidase; Proline dipeptidase; Prolidase [H]
Number of amino acids: Translated: 604; Mature: 604
Protein sequence:
>604_residues MNARLPETSSIPERLATLRNAMAREGVAAYLVPSADPHLSEYLPGRWQGRQWLSGFTGSAGTLIVTADFAGVWTDSRYWE QAYAQLAGTGVQLMKMTGGQQTAPHFEWLAQNVPAGGTVGVDGAVLGVAAARALSQALSARGVQLRTDVDLFDAIWPQRP SLPAAAVFEHAAPHASVARSDKLAQIRRAMADKGAQWHFISTLDDLAWLLNLRGADVSYNPVFVAHALIGVDHASLFVAD GKVPQALAEALAKDNISIEPYAKAADALAALPAGSTLLIDPRRITFGSLQSVPATVKVIEAVNPSTFFKSRKTAAEAGHV RETMEQDGAALAEFFAWFEGALGRETITELTIDERSTAARARRPGFVSLSFATIAGFNANGAMPHYRATEESHSVIEGNG LLLIDSGAQYLSGTTDITRVVPVGTISEEQRRDFTIVLKGTMALSRAHFPRGIRSPMLDAIARAPIWEAGADYGHGTGHG VGYFLNVHEGPQVISHYAPAEPWTAMEEGMITSVEPGIYRPGKWGVRIENLVLNVPAGQTEFGDFLKFETLTLCPIDTRC LDLSLLREDERAWLNAYHETVRTRLAPHVSGEAKAWLELRTQPI
Sequences:
>Translated_604_residues MNARLPETSSIPERLATLRNAMAREGVAAYLVPSADPHLSEYLPGRWQGRQWLSGFTGSAGTLIVTADFAGVWTDSRYWE QAYAQLAGTGVQLMKMTGGQQTAPHFEWLAQNVPAGGTVGVDGAVLGVAAARALSQALSARGVQLRTDVDLFDAIWPQRP SLPAAAVFEHAAPHASVARSDKLAQIRRAMADKGAQWHFISTLDDLAWLLNLRGADVSYNPVFVAHALIGVDHASLFVAD GKVPQALAEALAKDNISIEPYAKAADALAALPAGSTLLIDPRRITFGSLQSVPATVKVIEAVNPSTFFKSRKTAAEAGHV RETMEQDGAALAEFFAWFEGALGRETITELTIDERSTAARARRPGFVSLSFATIAGFNANGAMPHYRATEESHSVIEGNG LLLIDSGAQYLSGTTDITRVVPVGTISEEQRRDFTIVLKGTMALSRAHFPRGIRSPMLDAIARAPIWEAGADYGHGTGHG VGYFLNVHEGPQVISHYAPAEPWTAMEEGMITSVEPGIYRPGKWGVRIENLVLNVPAGQTEFGDFLKFETLTLCPIDTRC LDLSLLREDERAWLNAYHETVRTRLAPHVSGEAKAWLELRTQPI >Mature_604_residues MNARLPETSSIPERLATLRNAMAREGVAAYLVPSADPHLSEYLPGRWQGRQWLSGFTGSAGTLIVTADFAGVWTDSRYWE QAYAQLAGTGVQLMKMTGGQQTAPHFEWLAQNVPAGGTVGVDGAVLGVAAARALSQALSARGVQLRTDVDLFDAIWPQRP SLPAAAVFEHAAPHASVARSDKLAQIRRAMADKGAQWHFISTLDDLAWLLNLRGADVSYNPVFVAHALIGVDHASLFVAD GKVPQALAEALAKDNISIEPYAKAADALAALPAGSTLLIDPRRITFGSLQSVPATVKVIEAVNPSTFFKSRKTAAEAGHV RETMEQDGAALAEFFAWFEGALGRETITELTIDERSTAARARRPGFVSLSFATIAGFNANGAMPHYRATEESHSVIEGNG LLLIDSGAQYLSGTTDITRVVPVGTISEEQRRDFTIVLKGTMALSRAHFPRGIRSPMLDAIARAPIWEAGADYGHGTGHG VGYFLNVHEGPQVISHYAPAEPWTAMEEGMITSVEPGIYRPGKWGVRIENLVLNVPAGQTEFGDFLKFETLTLCPIDTRC LDLSLLREDERAWLNAYHETVRTRLAPHVSGEAKAWLELRTQPI
Specific function: Splits dipeptides with a prolyl in the C-terminal position and a nonpolar amino acid at the N-terminal position [H]
COG id: COG0006
COG function: function code E; Xaa-Pro aminopeptidase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24B family. Archaeal-type prolidase subfamily [H]
Homologues:
Organism=Homo sapiens, GI264681563, Length=631, Percent_Identity=36.608557844691, Blast_Score=388, Evalue=1e-107, Organism=Homo sapiens, GI264681565, Length=631, Percent_Identity=35.1822503961965, Blast_Score=358, Evalue=6e-99, Organism=Homo sapiens, GI93141226, Length=607, Percent_Identity=33.2784184514003, Blast_Score=338, Evalue=8e-93, Organism=Escherichia coli, GI1788728, Length=198, Percent_Identity=37.3737373737374, Blast_Score=98, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17509539, Length=614, Percent_Identity=32.8990228013029, Blast_Score=314, Evalue=1e-85, Organism=Caenorhabditis elegans, GI25149105, Length=603, Percent_Identity=27.363184079602, Blast_Score=225, Evalue=6e-59, Organism=Saccharomyces cerevisiae, GI6322999, Length=650, Percent_Identity=31.6923076923077, Blast_Score=292, Evalue=1e-79, Organism=Drosophila melanogaster, GI17137632, Length=618, Percent_Identity=34.9514563106796, Blast_Score=338, Evalue=9e-93, Organism=Drosophila melanogaster, GI161078230, Length=617, Percent_Identity=27.2285251215559, Blast_Score=241, Evalue=1e-63, Organism=Drosophila melanogaster, GI21357287, Length=617, Percent_Identity=27.2285251215559, Blast_Score=241, Evalue=1e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000587 - InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR001131 [H]
Pfam domain/function: PF01321 Creatinase_N; PF00557 Peptidase_M24 [H]
EC number: =3.4.13.9 [H]
Molecular weight: Translated: 65289; Mature: 65289
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNARLPETSSIPERLATLRNAMAREGVAAYLVPSADPHLSEYLPGRWQGRQWLSGFTGSA CCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCHHHHCCCCCCC GTLIVTADFAGVWTDSRYWEQAYAQLAGTGVQLMKMTGGQQTAPHFEWLAQNVPAGGTVG CEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCC VDGAVLGVAAARALSQALSARGVQLRTDVDLFDAIWPQRPSLPAAAVFEHAAPHASVARS CCHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHH DKLAQIRRAMADKGAQWHFISTLDDLAWLLNLRGADVSYNPVFVAHALIGVDHASLFVAD HHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEEC GKVPQALAEALAKDNISIEPYAKAADALAALPAGSTLLIDPRRITFGSLQSVPATVKVIE CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHH AVNPSTFFKSRKTAAEAGHVRETMEQDGAALAEFFAWFEGALGRETITELTIDERSTAAR HCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHEECCCHHHHHH ARRPGFVSLSFATIAGFNANGAMPHYRATEESHSVIEGNGLLLIDSGAQYLSGTTDITRV HCCCCEEEEEEHEEECCCCCCCCCCCCCCCCCCCEEECCCEEEECCCCHHHCCCCCCEEE VPVGTISEEQRRDFTIVLKGTMALSRAHFPRGIRSPMLDAIARAPIWEAGADYGHGTGHG EECCCCCHHHCCCEEEEEECHHHHHHHHCCCCCCHHHHHHHHHCCCHHCCCCCCCCCCCC VGYFLNVHEGPQVISHYAPAEPWTAMEEGMITSVEPGIYRPGKWGVRIENLVLNVPAGQT EEEEEEECCCHHHHHHCCCCCCCHHHHCCCEEECCCCCCCCCCCCEEEEEEEEECCCCCC EFGDFLKFETLTLCPIDTRCLDLSLLREDERAWLNAYHETVRTRLAPHVSGEAKAWLELR CHHHHHEECEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC TQPI CCCC >Mature Secondary Structure MNARLPETSSIPERLATLRNAMAREGVAAYLVPSADPHLSEYLPGRWQGRQWLSGFTGSA CCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHCCCCCCCHHHHCCCCCCC GTLIVTADFAGVWTDSRYWEQAYAQLAGTGVQLMKMTGGQQTAPHFEWLAQNVPAGGTVG CEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCC VDGAVLGVAAARALSQALSARGVQLRTDVDLFDAIWPQRPSLPAAAVFEHAAPHASVARS CCHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHH DKLAQIRRAMADKGAQWHFISTLDDLAWLLNLRGADVSYNPVFVAHALIGVDHASLFVAD HHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEEC GKVPQALAEALAKDNISIEPYAKAADALAALPAGSTLLIDPRRITFGSLQSVPATVKVIE CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHH AVNPSTFFKSRKTAAEAGHVRETMEQDGAALAEFFAWFEGALGRETITELTIDERSTAAR HCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHEECCCHHHHHH ARRPGFVSLSFATIAGFNANGAMPHYRATEESHSVIEGNGLLLIDSGAQYLSGTTDITRV HCCCCEEEEEEHEEECCCCCCCCCCCCCCCCCCCEEECCCEEEECCCCHHHCCCCCCEEE VPVGTISEEQRRDFTIVLKGTMALSRAHFPRGIRSPMLDAIARAPIWEAGADYGHGTGHG EECCCCCHHHCCCEEEEEECHHHHHHHHCCCCCCHHHHHHHHHCCCHHCCCCCCCCCCCC VGYFLNVHEGPQVISHYAPAEPWTAMEEGMITSVEPGIYRPGKWGVRIENLVLNVPAGQT EEEEEEECCCHHHHHHCCCCCCCHHHHCCCEEECCCCCCCCCCCCEEEEEEEEECCCCCC EFGDFLKFETLTLCPIDTRCLDLSLLREDERAWLNAYHETVRTRLAPHVSGEAKAWLELR CHHHHHEECEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEC TQPI CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]