| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is murC [H]
Identifier: 91785292
GI number: 91785292
Start: 4340439
End: 4341842
Strand: Reverse
Name: murC [H]
Synonym: Bxe_A0487
Alternate gene names: 91785292
Gene position: 4341842-4340439 (Counterclockwise)
Preceding gene: 91785293
Following gene: 91785291
Centisome position: 88.68
GC content: 64.39
Gene sequence:
>1404_bases ATGAAACACATCGTCAAACACATTCACTTTGTCGGCATCGGCGGTGTCGGCATGAGCGGCATCGCGGAGGTGCTGGTCAA CCTCGGCTATCAGGTGAGCGGCTCGGATCTGACGAGCAACGCGATTACCGATCGCCTCGCCGCACTCGGCGCGCGCATCG CGATCGGTCACGCTGCGGAGAACATTGAAGGCGCGAACGCGGTAGTCGTTTCTACCGCGGTGCGTAGTGACAATCCGGAA GTGCTGGCCGCGCGCCATCGCCGCATTCCGATCGTGCCGCGTGCGGTGATGCTCGCGGAACTGATGCGCCTGAAGCAGGG CATTGCAATTGCCGGCACGCACGGCAAGACCACGACCACCTCGCTGGTGGCGAGCGTGCTCGCCGCCGGTGGACTCGACC CGACCTTCGTGATCGGCGGCCGGCTGATCAGCGCGGGCGCGAATGCGCGGCTCGGTACGGGCGACTTCATCGTCGCGGAA GCCGACGAGTCGGACGCGTCGTTCCTGAATCTGTTCCCGGTGATCGAAGTCATCACGAACATCGACGCCGATCACATGGA CACCTACGGCCACGACTTCGCGCGGCTCAAGCAGGCGTTCATCGAATTCACGCACCGTCTGCCGTTCTACGGCATCGCGG TGCTGTGCGTCGACGATCCGAACGTGAAGGAAATCCTGCCGTTCGTGTCGAAGCCGATCATCCGCTACGGCTTCGCGCCG GACGCGCAGGTGCGCGCGGTGAACGTACAGGCACGCGACGGCAAGATGCATTTTACGGCGATGCGCGAAGACGCGGCGCC GCTCGACATCGTGCTGAACCTGCCGGGCGAGCACAACGTGCAGAACGCTTTGGCCGCCATTGCCATTGCGACTGAACTTG AAGTGAAAGATGCCGATATCCAGCGAGCGCTGGCGGATTTCAACGGCGTGGGCCGACGCTTCCAGCGCTACGGCGAGGTG CCGGTGTTCAGCGAAGGCAGCACGAACGGCGCGTACACACTGGTCGACGACTACGGTCATCACCCGGTCGAAATGGCGGC CACGGTGGCGGCGGCGCGCGGCGCATTTCCGGGCCGGCGTCTGGTGCTGGCATTCCAGCCGCACCGCTTCACGCGTACGC GTGACTGCTTCGAAGATTTTGTGAAAGTGCTGTCGACCGTCGACGCGTTGGTGCTGACCGAAGTCTATTCGGCCGGCGAG TCGCCGATCGTCGCCGCGGACGGCCGCGCTCTCGCGCGTGCGCTGCGGGTGGCAGGCAAGGTCGAACCGGTGTTTGTCGA TACGGTGGATGAAGTGCCGGACGCGCTCTCGGCGATAGTGCGCGACGGCGATGTGGTGATCACGATGGGCGCAGGTTCGA TCGGCGGTGTGCCGGCTCGCCTCGCGCAGGAAACAAAGGTGTGA
Upstream 100 bases:
>100_bases GTTCGCGCTCGCTCGCGAAACCCGACGCCACGGAACAGGTCGCGCAGATTTGCGCGACCGTGGCGGGTTCGATTTCGGGC GCGAGCCCAGAAGGAAAGCA
Downstream 100 bases:
>100_bases GTGAGATGAGCAGTATCGACCCCAAACAGTTCGGCAAGGTGGCAGTGCTGCTCGGCGGTAATTCCGCCGAGCGCGAGGTG TCGCTCAATTCCGGGCGTCT
Product: UDP-N-acetylmuramate--L-alanine ligase
Products: NA
Alternate protein names: UDP-N-acetylmuramoyl-L-alanine synthetase [H]
Number of amino acids: Translated: 467; Mature: 467
Protein sequence:
>467_residues MKHIVKHIHFVGIGGVGMSGIAEVLVNLGYQVSGSDLTSNAITDRLAALGARIAIGHAAENIEGANAVVVSTAVRSDNPE VLAARHRRIPIVPRAVMLAELMRLKQGIAIAGTHGKTTTTSLVASVLAAGGLDPTFVIGGRLISAGANARLGTGDFIVAE ADESDASFLNLFPVIEVITNIDADHMDTYGHDFARLKQAFIEFTHRLPFYGIAVLCVDDPNVKEILPFVSKPIIRYGFAP DAQVRAVNVQARDGKMHFTAMREDAAPLDIVLNLPGEHNVQNALAAIAIATELEVKDADIQRALADFNGVGRRFQRYGEV PVFSEGSTNGAYTLVDDYGHHPVEMAATVAAARGAFPGRRLVLAFQPHRFTRTRDCFEDFVKVLSTVDALVLTEVYSAGE SPIVAADGRALARALRVAGKVEPVFVDTVDEVPDALSAIVRDGDVVITMGAGSIGGVPARLAQETKV
Sequences:
>Translated_467_residues MKHIVKHIHFVGIGGVGMSGIAEVLVNLGYQVSGSDLTSNAITDRLAALGARIAIGHAAENIEGANAVVVSTAVRSDNPE VLAARHRRIPIVPRAVMLAELMRLKQGIAIAGTHGKTTTTSLVASVLAAGGLDPTFVIGGRLISAGANARLGTGDFIVAE ADESDASFLNLFPVIEVITNIDADHMDTYGHDFARLKQAFIEFTHRLPFYGIAVLCVDDPNVKEILPFVSKPIIRYGFAP DAQVRAVNVQARDGKMHFTAMREDAAPLDIVLNLPGEHNVQNALAAIAIATELEVKDADIQRALADFNGVGRRFQRYGEV PVFSEGSTNGAYTLVDDYGHHPVEMAATVAAARGAFPGRRLVLAFQPHRFTRTRDCFEDFVKVLSTVDALVLTEVYSAGE SPIVAADGRALARALRVAGKVEPVFVDTVDEVPDALSAIVRDGDVVITMGAGSIGGVPARLAQETKV >Mature_467_residues MKHIVKHIHFVGIGGVGMSGIAEVLVNLGYQVSGSDLTSNAITDRLAALGARIAIGHAAENIEGANAVVVSTAVRSDNPE VLAARHRRIPIVPRAVMLAELMRLKQGIAIAGTHGKTTTTSLVASVLAAGGLDPTFVIGGRLISAGANARLGTGDFIVAE ADESDASFLNLFPVIEVITNIDADHMDTYGHDFARLKQAFIEFTHRLPFYGIAVLCVDDPNVKEILPFVSKPIIRYGFAP DAQVRAVNVQARDGKMHFTAMREDAAPLDIVLNLPGEHNVQNALAAIAIATELEVKDADIQRALADFNGVGRRFQRYGEV PVFSEGSTNGAYTLVDDYGHHPVEMAATVAAARGAFPGRRLVLAFQPHRFTRTRDCFEDFVKVLSTVDALVLTEVYSAGE SPIVAADGRALARALRVAGKVEPVFVDTVDEVPDALSAIVRDGDVVITMGAGSIGGVPARLAQETKV
Specific function: Cell wall formation [H]
COG id: COG0773
COG function: function code M; UDP-N-acetylmuramate-alanine ligase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family [H]
Homologues:
Organism=Escherichia coli, GI1786279, Length=459, Percent_Identity=54.2483660130719, Blast_Score=461, Evalue=1e-131, Organism=Escherichia coli, GI1790680, Length=470, Percent_Identity=28.5106382978723, Blast_Score=157, Evalue=1e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR016040 - InterPro: IPR005758 [H]
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.8 [H]
Molecular weight: Translated: 49622; Mature: 49622
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHIVKHIHFVGIGGVGMSGIAEVLVNLGYQVSGSDLTSNAITDRLAALGARIAIGHAAE CCHHHHHHHEEEECCCCHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHEEECCHHC NIEGANAVVVSTAVRSDNPEVLAARHRRIPIVPRAVMLAELMRLKQGIAIAGTHGKTTTT CCCCCCEEEEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHH SLVASVLAAGGLDPTFVIGGRLISAGANARLGTGDFIVAEADESDASFLNLFPVIEVITN HHHHHHHHHCCCCCEEEECCEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHC IDADHMDTYGHDFARLKQAFIEFTHRLPFYGIAVLCVDDPNVKEILPFVSKPIIRYGFAP CCCHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHCCHHHCCCCC DAQVRAVNVQARDGKMHFTAMREDAAPLDIVLNLPGEHNVQNALAAIAIATELEVKDADI CCEEEEEEEEECCCCEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCEECHHHH QRALADFNGVGRRFQRYGEVPVFSEGSTNGAYTLVDDYGHHPVEMAATVAAARGAFPGRR HHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCE LVLAFQPHRFTRTRDCFEDFVKVLSTVDALVLTEVYSAGESPIVAADGRALARALRVAGK EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCC VEPVFVDTVDEVPDALSAIVRDGDVVITMGAGSIGGVPARLAQETKV CCEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHCCC >Mature Secondary Structure MKHIVKHIHFVGIGGVGMSGIAEVLVNLGYQVSGSDLTSNAITDRLAALGARIAIGHAAE CCHHHHHHHEEEECCCCHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHEEECCHHC NIEGANAVVVSTAVRSDNPEVLAARHRRIPIVPRAVMLAELMRLKQGIAIAGTHGKTTTT CCCCCCEEEEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHH SLVASVLAAGGLDPTFVIGGRLISAGANARLGTGDFIVAEADESDASFLNLFPVIEVITN HHHHHHHHHCCCCCEEEECCEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHC IDADHMDTYGHDFARLKQAFIEFTHRLPFYGIAVLCVDDPNVKEILPFVSKPIIRYGFAP CCCHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHCCHHHCCCCC DAQVRAVNVQARDGKMHFTAMREDAAPLDIVLNLPGEHNVQNALAAIAIATELEVKDADI CCEEEEEEEEECCCCEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCEECHHHH QRALADFNGVGRRFQRYGEVPVFSEGSTNGAYTLVDDYGHHPVEMAATVAAARGAFPGRR HHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCE LVLAFQPHRFTRTRDCFEDFVKVLSTVDALVLTEVYSAGESPIVAADGRALARALRVAGK EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCC VEPVFVDTVDEVPDALSAIVRDGDVVITMGAGSIGGVPARLAQETKV CCEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA