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The map label for this gene is pyrF [H]

Identifier: 91785227

GI number: 91785227

Start: 4273405

End: 4274220

Strand: Reverse

Name: pyrF [H]

Synonym: Bxe_A0552

Alternate gene names: 91785227

Gene position: 4274220-4273405 (Counterclockwise)

Preceding gene: 91785228

Following gene: 91785222

Centisome position: 87.3

GC content: 63.85

Gene sequence:

>816_bases
ATGTCCCATTTCATCCAGACACTCAACGACGCCTGGCAGCGCACCAACTCGCTGCTGTGCGTCGGCCTCGATCCCGAGCC
CAGCAAATTCCCGGGCGCGCTCGCGGGCCGTCCCGAGGCGATTTTCGACTTCTGCCGCACGATCGTCGATGCGGCCGCGC
CGTACGCGTCGTCGTTCAAACCGCAGATTGCCTACTTCGCGGCGCATCGAGCGGAAGACCAGCTCGAGCAGTTGATCGCT
CACATTCATGCGAACCATCCGGGCTTGCCGGTGATTCTCGACGCGAAGCGCGGCGACATCGGCAGCACAGCCGAGCAGTA
TGCGCGCGAGGCATTCGAGCGCTATCAGGCCGACGCGGTGACGGTGAATCCGTACATGGGTTTCGATTCGATCCAGCCGT
ATCTGGAGCACGAAGGCAAAGGCGTGATCGTGCTGTGCCGCACGTCGAACGCGGGCGGCTCCGACCTGCAATTCCTGGAA
ACCGGCGGCCGGCCGCTCTATCAGGTCGTCGCGCAACTGGCGGCGGACAAATGGAACGCGAGCGGTCAACTGGGTCTGGT
GGTCGGCGCGACGTTCCCGAAGGAAATCGAAGTGGTGCGCGGGATTGTCGGCGATATGCCGCTGCTGATTCCGGGCATCG
GCGCGCAAGGCGGCGACGTGCAGGCCACGGTCAACGCCGGCCGCACCGCGAATGGCACGGGCATGCTGATCAACTCATCG
CGAGCGATTATTTACGCGGGCAAGGACGACGATTTCGCCGAAGCCGCGGCAAAGGCCGCGATGGAAACGCGTGACCGGAT
CAACACGTTCCGGTAA

Upstream 100 bases:

>100_bases
GGGGCGACCGCGCGGACGCGTGCGCCCCCGGCGCGGCTCGCCGCGCAGGACGGGTAAAATACGCGCCTCTTCCGTTTTCC
TGCTCGCCGCGAGACCCACC

Downstream 100 bases:

>100_bases
CGCGGGCTGTCCTTCCCGAAGAGAGCTTCAGAGGAACGGGCAGGTGGGTATCCGTCAGGCCGGCCGCAGCCGCTCGATCA
ACGCCGCATGCCGCGGATGC

Product: orotidine 5'-phosphate decarboxylase

Products: NA

Alternate protein names: OMP decarboxylase; OMPDCase; OMPdecase [H]

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MSHFIQTLNDAWQRTNSLLCVGLDPEPSKFPGALAGRPEAIFDFCRTIVDAAAPYASSFKPQIAYFAAHRAEDQLEQLIA
HIHANHPGLPVILDAKRGDIGSTAEQYAREAFERYQADAVTVNPYMGFDSIQPYLEHEGKGVIVLCRTSNAGGSDLQFLE
TGGRPLYQVVAQLAADKWNASGQLGLVVGATFPKEIEVVRGIVGDMPLLIPGIGAQGGDVQATVNAGRTANGTGMLINSS
RAIIYAGKDDDFAEAAAKAAMETRDRINTFR

Sequences:

>Translated_271_residues
MSHFIQTLNDAWQRTNSLLCVGLDPEPSKFPGALAGRPEAIFDFCRTIVDAAAPYASSFKPQIAYFAAHRAEDQLEQLIA
HIHANHPGLPVILDAKRGDIGSTAEQYAREAFERYQADAVTVNPYMGFDSIQPYLEHEGKGVIVLCRTSNAGGSDLQFLE
TGGRPLYQVVAQLAADKWNASGQLGLVVGATFPKEIEVVRGIVGDMPLLIPGIGAQGGDVQATVNAGRTANGTGMLINSS
RAIIYAGKDDDFAEAAAKAAMETRDRINTFR
>Mature_270_residues
SHFIQTLNDAWQRTNSLLCVGLDPEPSKFPGALAGRPEAIFDFCRTIVDAAAPYASSFKPQIAYFAAHRAEDQLEQLIAH
IHANHPGLPVILDAKRGDIGSTAEQYAREAFERYQADAVTVNPYMGFDSIQPYLEHEGKGVIVLCRTSNAGGSDLQFLET
GGRPLYQVVAQLAADKWNASGQLGLVVGATFPKEIEVVRGIVGDMPLLIPGIGAQGGDVQATVNAGRTANGTGMLINSSR
AIIYAGKDDDFAEAAAKAAMETRDRINTFR

Specific function: Unknown

COG id: COG0284

COG function: function code F; Orotidine-5'-phosphate decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OMP decarboxylase family. Type 2 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR018089
- InterPro:   IPR011995
- InterPro:   IPR001754
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00215 OMPdecase [H]

EC number: =4.1.1.23 [H]

Molecular weight: Translated: 29107; Mature: 28976

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS00156 OMPDECASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHFIQTLNDAWQRTNSLLCVGLDPEPSKFPGALAGRPEAIFDFCRTIVDAAAPYASSFK
CHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCC
PQIAYFAAHRAEDQLEQLIAHIHANHPGLPVILDAKRGDIGSTAEQYAREAFERYQADAV
CHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEE
TVNPYMGFDSIQPYLEHEGKGVIVLCRTSNAGGSDLQFLETGGRPLYQVVAQLAADKWNA
EECCCCCCHHHCHHHHCCCCEEEEEEECCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCC
SGQLGLVVGATFPKEIEVVRGIVGDMPLLIPGIGAQGGDVQATVNAGRTANGTGMLINSS
CCCEEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCCCCCEEEEECC
RAIIYAGKDDDFAEAAAKAAMETRDRINTFR
EEEEEECCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SHFIQTLNDAWQRTNSLLCVGLDPEPSKFPGALAGRPEAIFDFCRTIVDAAAPYASSFK
HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCC
PQIAYFAAHRAEDQLEQLIAHIHANHPGLPVILDAKRGDIGSTAEQYAREAFERYQADAV
CHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEE
TVNPYMGFDSIQPYLEHEGKGVIVLCRTSNAGGSDLQFLETGGRPLYQVVAQLAADKWNA
EECCCCCCHHHCHHHHCCCCEEEEEEECCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCC
SGQLGLVVGATFPKEIEVVRGIVGDMPLLIPGIGAQGGDVQATVNAGRTANGTGMLINSS
CCCEEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCCCCCCEEEEECC
RAIIYAGKDDDFAEAAAKAAMETRDRINTFR
EEEEEECCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA