| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is maeB [H]
Identifier: 91785222
GI number: 91785222
Start: 4268106
End: 4270445
Strand: Reverse
Name: maeB [H]
Synonym: Bxe_A0557
Alternate gene names: 91785222
Gene position: 4270445-4268106 (Counterclockwise)
Preceding gene: 91785227
Following gene: 91785221
Centisome position: 87.23
GC content: 64.87
Gene sequence:
>2340_bases ATGCCGTCGAACGTCTATTCTAATCTGCCCTTCGAAGCCCGCCTTATGTCGACTCCCGTCAATAGCAAACTCCGCGAAGC CGCCCTCGATTACCACGAGTTCCCCACCCCCGGGAAGATCGCGATCGCCCCGACCAAGCAGATGATCAACCAGCGCGACC TGGCGCTGGCGTACTCGCCGGGCGTGGCGTTCGCGTGCGAGGAAATCGTCGAAAACCCGCTGAACGCCGCGCGTTTCACC GCGCGCAGCAACCTGGTCGGCGTGGTCACCAACGGCACCGCGGTGCTGGGTCTGGGCAACATCGGGCCGCTCGCCTCGAA GCCGGTCATGGAAGGCAAGGCCGTGCTGTTCAAGAAGTTCGCCGGCATCGACGTGTTCGATATCGAGCTGAACGAGTCCG ACCCGCACAAGCTGGTCGACGTGATCGCGGCGCTGGAGCCGACCTTCGGCGGCATCAACCTCGAAGACATCAAGGCGCCG GACTGTTTCATCGTCGAGCGCGAATGCCGCAAGCGCATGAAGATTCCGGTCTTCCACGACGACCAGCACGGCACCGCGAT CGTCGTCGCGGCGGCCATCACCAATGGTCTGAAGGTGGTCGGCAAGGACATCAGGGAGGTCAAGCTGGTGTCCTCCGGCG CGGGCGCGGCGGCGCTGGCCTGTCTGGACCTGCTGGTCGACATCGGCCTGCCGCTGGAGAACATCACCGTCACCGATCTG GCCGGCGTGGTCTACAAGGGCCGTGTCGAACTGATGGACCCGGACAAGGAGCGCTTCGCGCGTGAAACCGACGCCCGCAC GCTTGCCGAAGCCATCGGCGGCGCGGACGTTTTTCTCGGCCTCTCCGCCGGCGGCGTGCTCAAGCAGGACATGGTCAAAC AGATGGCGGACAAGCCGCTGATTCTGGCGCTGGCCAACCCGACACCGGAAATCCTGCCGGAACTGGCGCTCGAAGTGCGC CCGGATGCGGTGCTGTGCACGGGCCGCACCGACTATCCGAACCAGGTGAACAACGTGCTGGTGTTCCCGTTCCTGTTCCG CGGCGCGCTGGACGCGGGCGCGACCACGGTGACGCGGGAAATGGAAATCGCGGCGGTCAATGCGATCGCCGAACTGGCGC GCCAGGAACAGAGCGATATCGTCGCGACGGCGTATGGCATTCAGGATCTCTCGTTCGGCCCGGAGTATCTGATTCCGAAG CCGTTCGATCCGCGCCTGATCGTCAAGGTCGCGCCGGCGGTGGCGCAGGCCGCGATGGATTCGGGCGTCGCCGAGCGGCC GATCGAGGACATGGACGCGTACGAACAGCATCTGCAGCAGTTCGTGTATCACAGCGGCACGACCATGAAGCCGATTTTCC AGCTGGCGCGCAGCGTCGAGCCGGAGAAGAAGCGCATCGTGTTCGCGGAAGGCGAGGAGGAGCGCGTGCTGCGCGCCATG CAGATCATCGTCGACGAGAAGCTGGCCAAACCGATCCTGATCGGCCGCCCGGCGGTGATCGAGCAGCGCATTGCGCGCTA CGGTCTGCGGCTGGTCGCGGGGCAGGACTACACGGTGGTGAACACCGACCACGACGAGCGTTACCGCGACTTCTGGCAGG AGTATCACCGGATGATGTCGCGCAAGGGCATCAGCGCGCAGATGGCGAAGCTCGAAATGCGCCGCCGCACCACGCTGATC GGCGCGATGCTGGTGGAAAAGGGCGAGGCGGACGGCATGATCTGCGGCACGGTGTCGACCACGCACCGGCATCTGCACTT CATCGATCAGGTGATCGGCAGGAAGGCGGGCGCGAAAGTGTACGCGGCGATGAACGCGCTGGTGTTGCCGAACCGCCAGA TCTTCCTGGTGGACACGCACGTGAACGTGGATCCGACGCCGGAGCAACTGGCGGAAATCACGATCATGGCGGCCGAAGAA GTGCGCCGTTTCGGGATCGAGCCGAAGGTGGCGCTGCTGTCGCATTCGAACTTCGGCACGAGCAACGCGCCGACCGCGCA GAAGATGCGCGACACGCTGGCGATTTTGCGCGAGCGCGCGCCGGACCTGCAGGTGGACGGCGAAATGCACGGTGACATCG CACTCGACGCGAACCTGCGCCGCGAAGTGATGCCCGACTCGACGCTCGAAGGCGATGCGAACCTGCTGGTGCTGCCGAAC ATCGACGCGGCGAACATCTCGTACAACCTGCTGAAGACCGCCGCGGGCAACAACATCGCGATCGGTCCGATACTGCTGGG CGCAGCCAGGCCGGTGCACGTGCTGACGGCTTCGGCGACGGTGCGCCGGATCGTCAATATGACGGCGTTGCTGGTGGCGG ATGTGATCGCGGCGCGTTAA
Upstream 100 bases:
>100_bases CCGCGTTCGGTCCCACGCGCGCCGCGTCAAGCTTTCGCTATGTTTAAGTCGCGGCAGTTGTACCCGTATTGAAGGAATCG GGCTGGCAATTGGGGCTACA
Downstream 100 bases:
>100_bases TCCGCGATCCACACGAAGCATGGCGCGGGAACGACCGCGCCATGCAAAAAAAAGCGCGCCCGCAACGGGCACGCCTCAGG GTGAACAGGGGATCCCTCAC
Product: malic enzyme
Products: NA
Alternate protein names: NADP-ME [H]
Number of amino acids: Translated: 779; Mature: 778
Protein sequence:
>779_residues MPSNVYSNLPFEARLMSTPVNSKLREAALDYHEFPTPGKIAIAPTKQMINQRDLALAYSPGVAFACEEIVENPLNAARFT ARSNLVGVVTNGTAVLGLGNIGPLASKPVMEGKAVLFKKFAGIDVFDIELNESDPHKLVDVIAALEPTFGGINLEDIKAP DCFIVERECRKRMKIPVFHDDQHGTAIVVAAAITNGLKVVGKDIREVKLVSSGAGAAALACLDLLVDIGLPLENITVTDL AGVVYKGRVELMDPDKERFARETDARTLAEAIGGADVFLGLSAGGVLKQDMVKQMADKPLILALANPTPEILPELALEVR PDAVLCTGRTDYPNQVNNVLVFPFLFRGALDAGATTVTREMEIAAVNAIAELARQEQSDIVATAYGIQDLSFGPEYLIPK PFDPRLIVKVAPAVAQAAMDSGVAERPIEDMDAYEQHLQQFVYHSGTTMKPIFQLARSVEPEKKRIVFAEGEEERVLRAM QIIVDEKLAKPILIGRPAVIEQRIARYGLRLVAGQDYTVVNTDHDERYRDFWQEYHRMMSRKGISAQMAKLEMRRRTTLI GAMLVEKGEADGMICGTVSTTHRHLHFIDQVIGRKAGAKVYAAMNALVLPNRQIFLVDTHVNVDPTPEQLAEITIMAAEE VRRFGIEPKVALLSHSNFGTSNAPTAQKMRDTLAILRERAPDLQVDGEMHGDIALDANLRREVMPDSTLEGDANLLVLPN IDAANISYNLLKTAAGNNIAIGPILLGAARPVHVLTASATVRRIVNMTALLVADVIAAR
Sequences:
>Translated_779_residues MPSNVYSNLPFEARLMSTPVNSKLREAALDYHEFPTPGKIAIAPTKQMINQRDLALAYSPGVAFACEEIVENPLNAARFT ARSNLVGVVTNGTAVLGLGNIGPLASKPVMEGKAVLFKKFAGIDVFDIELNESDPHKLVDVIAALEPTFGGINLEDIKAP DCFIVERECRKRMKIPVFHDDQHGTAIVVAAAITNGLKVVGKDIREVKLVSSGAGAAALACLDLLVDIGLPLENITVTDL AGVVYKGRVELMDPDKERFARETDARTLAEAIGGADVFLGLSAGGVLKQDMVKQMADKPLILALANPTPEILPELALEVR PDAVLCTGRTDYPNQVNNVLVFPFLFRGALDAGATTVTREMEIAAVNAIAELARQEQSDIVATAYGIQDLSFGPEYLIPK PFDPRLIVKVAPAVAQAAMDSGVAERPIEDMDAYEQHLQQFVYHSGTTMKPIFQLARSVEPEKKRIVFAEGEEERVLRAM QIIVDEKLAKPILIGRPAVIEQRIARYGLRLVAGQDYTVVNTDHDERYRDFWQEYHRMMSRKGISAQMAKLEMRRRTTLI GAMLVEKGEADGMICGTVSTTHRHLHFIDQVIGRKAGAKVYAAMNALVLPNRQIFLVDTHVNVDPTPEQLAEITIMAAEE VRRFGIEPKVALLSHSNFGTSNAPTAQKMRDTLAILRERAPDLQVDGEMHGDIALDANLRREVMPDSTLEGDANLLVLPN IDAANISYNLLKTAAGNNIAIGPILLGAARPVHVLTASATVRRIVNMTALLVADVIAAR >Mature_778_residues PSNVYSNLPFEARLMSTPVNSKLREAALDYHEFPTPGKIAIAPTKQMINQRDLALAYSPGVAFACEEIVENPLNAARFTA RSNLVGVVTNGTAVLGLGNIGPLASKPVMEGKAVLFKKFAGIDVFDIELNESDPHKLVDVIAALEPTFGGINLEDIKAPD CFIVERECRKRMKIPVFHDDQHGTAIVVAAAITNGLKVVGKDIREVKLVSSGAGAAALACLDLLVDIGLPLENITVTDLA GVVYKGRVELMDPDKERFARETDARTLAEAIGGADVFLGLSAGGVLKQDMVKQMADKPLILALANPTPEILPELALEVRP DAVLCTGRTDYPNQVNNVLVFPFLFRGALDAGATTVTREMEIAAVNAIAELARQEQSDIVATAYGIQDLSFGPEYLIPKP FDPRLIVKVAPAVAQAAMDSGVAERPIEDMDAYEQHLQQFVYHSGTTMKPIFQLARSVEPEKKRIVFAEGEEERVLRAMQ IIVDEKLAKPILIGRPAVIEQRIARYGLRLVAGQDYTVVNTDHDERYRDFWQEYHRMMSRKGISAQMAKLEMRRRTTLIG AMLVEKGEADGMICGTVSTTHRHLHFIDQVIGRKAGAKVYAAMNALVLPNRQIFLVDTHVNVDPTPEQLAEITIMAAEEV RRFGIEPKVALLSHSNFGTSNAPTAQKMRDTLAILRERAPDLQVDGEMHGDIALDANLRREVMPDSTLEGDANLLVLPNI DAANISYNLLKTAAGNNIAIGPILLGAARPVHVLTASATVRRIVNMTALLVADVIAAR
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Homo sapiens, GI4505143, Length=343, Percent_Identity=26.530612244898, Blast_Score=84, Evalue=7e-16, Organism=Homo sapiens, GI62420882, Length=352, Percent_Identity=27.5568181818182, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI62420880, Length=352, Percent_Identity=27.5568181818182, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI239049447, Length=352, Percent_Identity=27.5568181818182, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI4505145, Length=368, Percent_Identity=28.2608695652174, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI270265879, Length=368, Percent_Identity=28.2608695652174, Blast_Score=68, Evalue=3e-11, Organism=Escherichia coli, GI1788806, Length=756, Percent_Identity=61.1111111111111, Blast_Score=958, Evalue=0.0, Organism=Escherichia coli, GI1788635, Length=319, Percent_Identity=32.2884012539185, Blast_Score=161, Evalue=2e-40, Organism=Escherichia coli, GI1788800, Length=315, Percent_Identity=33.015873015873, Blast_Score=149, Evalue=8e-37, Organism=Caenorhabditis elegans, GI17537199, Length=411, Percent_Identity=24.330900243309, Blast_Score=70, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6322823, Length=239, Percent_Identity=27.6150627615063, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI281362672, Length=474, Percent_Identity=26.1603375527426, Blast_Score=87, Evalue=4e-17, Organism=Drosophila melanogaster, GI21356279, Length=474, Percent_Identity=26.1603375527426, Blast_Score=87, Evalue=6e-17, Organism=Drosophila melanogaster, GI281362674, Length=474, Percent_Identity=26.1603375527426, Blast_Score=86, Evalue=7e-17, Organism=Drosophila melanogaster, GI24646388, Length=349, Percent_Identity=28.080229226361, Blast_Score=76, Evalue=1e-13, Organism=Drosophila melanogaster, GI24646386, Length=349, Percent_Identity=28.080229226361, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI78707242, Length=415, Percent_Identity=24.8192771084337, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI78707238, Length=415, Percent_Identity=24.8192771084337, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI78707240, Length=349, Percent_Identity=25.7879656160458, Blast_Score=71, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR012188 - InterPro: IPR016040 - InterPro: IPR002505 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M; PF01515 PTA_PTB [H]
EC number: =1.1.1.40 [H]
Molecular weight: Translated: 84844; Mature: 84713
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSNVYSNLPFEARLMSTPVNSKLREAALDYHEFPTPGKIAIAPTKQMINQRDLALAYSP CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCHHHHCCCCCEEEEECC GVAFACEEIVENPLNAARFTARSNLVGVVTNGTAVLGLGNIGPLASKPVMEGKAVLFKKF CHHHHHHHHHHCCCHHHHHHHCCCEEEEEECCEEEEEECCCCCCCCCCCCCCHHHHHHHH AGIDVFDIELNESDPHKLVDVIAALEPTFGGINLEDIKAPDCFIVERECRKRMKIPVFHD CCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEEEHHHHHCCCCCEEEC DQHGTAIVVAAAITNGLKVVGKDIREVKLVSSGAGAAALACLDLLVDIGLPLENITVTDL CCCCCEEEEEEHHHCCHHHHCCCHHHEEEECCCCCHHHHHHHHHHHHCCCCCCCEEHHHH AGVVYKGRVELMDPDKERFARETDARTLAEAIGGADVFLGLSAGGVLKQDMVKQMADKPL HHHHEECEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCE ILALANPTPEILPELALEVRPDAVLCTGRTDYPNQVNNVLVFPFLFRGALDAGATTVTRE EEEECCCCHHHHHHHHHEECCCEEEEECCCCCCCHHCCEEEEHHHHHHHHCCCCHHEHHH MEIAAVNAIAELARQEQSDIVATAYGIQDLSFGPEYLIPKPFDPRLIVKVAPAVAQAAMD HHHHHHHHHHHHHHHHHCCEEEEEECCEECCCCCCCCCCCCCCCEEEEEECHHHHHHHHH SGVAERPIEDMDAYEQHLQQFVYHSGTTMKPIFQLARSVEPEKKRIVFAEGEEERVLRAM CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHEEEEECCCHHHHHHHH QIIVDEKLAKPILIGRPAVIEQRIARYGLRLVAGQDYTVVNTDHDERYRDFWQEYHRMMS HHHHHHHHCCCEEECCCHHHHHHHHHCCEEEEECCCEEEEECCCHHHHHHHHHHHHHHHH RKGISAQMAKLEMRRRTTLIGAMLVEKGEADGMICGTVSTTHRHLHFIDQVIGRKAGAKV CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCC YAAMNALVLPNRQIFLVDTHVNVDPTPEQLAEITIMAAEEVRRFGIEPKVALLSHSNFGT EEHHHEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC SNAPTAQKMRDTLAILRERAPDLQVDGEMHGDIALDANLRREVMPDSTLEGDANLLVLPN CCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCEEECCCCHHHCCCCCCCCCCCCEEEECC IDAANISYNLLKTAAGNNIAIGPILLGAARPVHVLTASATVRRIVNMTALLVADVIAAR CCCCCCCHHHHHHCCCCCEEECCEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PSNVYSNLPFEARLMSTPVNSKLREAALDYHEFPTPGKIAIAPTKQMINQRDLALAYSP CCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCHHHHCCCCCEEEEECC GVAFACEEIVENPLNAARFTARSNLVGVVTNGTAVLGLGNIGPLASKPVMEGKAVLFKKF CHHHHHHHHHHCCCHHHHHHHCCCEEEEEECCEEEEEECCCCCCCCCCCCCCHHHHHHHH AGIDVFDIELNESDPHKLVDVIAALEPTFGGINLEDIKAPDCFIVERECRKRMKIPVFHD CCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEEEHHHHHCCCCCEEEC DQHGTAIVVAAAITNGLKVVGKDIREVKLVSSGAGAAALACLDLLVDIGLPLENITVTDL CCCCCEEEEEEHHHCCHHHHCCCHHHEEEECCCCCHHHHHHHHHHHHCCCCCCCEEHHHH AGVVYKGRVELMDPDKERFARETDARTLAEAIGGADVFLGLSAGGVLKQDMVKQMADKPL HHHHEECEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCE ILALANPTPEILPELALEVRPDAVLCTGRTDYPNQVNNVLVFPFLFRGALDAGATTVTRE EEEECCCCHHHHHHHHHEECCCEEEEECCCCCCCHHCCEEEEHHHHHHHHCCCCHHEHHH MEIAAVNAIAELARQEQSDIVATAYGIQDLSFGPEYLIPKPFDPRLIVKVAPAVAQAAMD HHHHHHHHHHHHHHHHHCCEEEEEECCEECCCCCCCCCCCCCCCEEEEEECHHHHHHHHH SGVAERPIEDMDAYEQHLQQFVYHSGTTMKPIFQLARSVEPEKKRIVFAEGEEERVLRAM CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHEEEEECCCHHHHHHHH QIIVDEKLAKPILIGRPAVIEQRIARYGLRLVAGQDYTVVNTDHDERYRDFWQEYHRMMS HHHHHHHHCCCEEECCCHHHHHHHHHCCEEEEECCCEEEEECCCHHHHHHHHHHHHHHHH RKGISAQMAKLEMRRRTTLIGAMLVEKGEADGMICGTVSTTHRHLHFIDQVIGRKAGAKV CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCC YAAMNALVLPNRQIFLVDTHVNVDPTPEQLAEITIMAAEEVRRFGIEPKVALLSHSNFGT EEHHHEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC SNAPTAQKMRDTLAILRERAPDLQVDGEMHGDIALDANLRREVMPDSTLEGDANLLVLPN CCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCEEECCCCHHHCCCCCCCCCCCCEEEECC IDAANISYNLLKTAAGNNIAIGPILLGAARPVHVLTASATVRRIVNMTALLVADVIAAR CCCCCCCHHHHHHCCCCCEEECCEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 36376 [H]