| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is ywrD [H]
Identifier: 91785136
GI number: 91785136
Start: 4170656
End: 4172293
Strand: Reverse
Name: ywrD [H]
Synonym: Bxe_A0644
Alternate gene names: 91785136
Gene position: 4172293-4170656 (Counterclockwise)
Preceding gene: 91785140
Following gene: 91785135
Centisome position: 85.22
GC content: 64.77
Gene sequence:
>1638_bases ATGACTGGCTTCAACTGGCAAAACCCTTATCCGACGCCGCGTCTGCCTGTGTTCGCGCGCAACATCGTTTCGACTTCGCA TCCGCTCGCCGCGCAAGCGGGGCTGCGCATGCTGTGGAAAGGCGGCAATGCCGTCGATGCGGCGATCGCGGCCGCCGCCG CCATCACGGTGGTCGAGCCGGTATCGTGCGGGCTGGGCAGCGACGCCTTCGCGCTGGTGTGGGACGGCAAGAAGCTGCAT GGCCTGAACGCCTCGGGTGTGTCGCCGGCGGCGTGGAATGTCGACTACTTCAAGCGCAAGTACGGCGAGGAAAACGGTCT CGCGAAGCAGCCCAAGCGCGGCTGGGACGCGGTAACGGTGCCGGGCGTGATCGCCGGCTGGGAAGCGCTGCATCAGAAAT TCGGCACGCTGCCGTTCGCTGACCTGATGGAGCCGGCTATCGAGATCGCCGAGCGTGGTCATGCGGTGGCGAGCATCGTC GCCTACAAGTGGGCGGCGGCCGTGCCGGAACTGAAGGATCTGCCGGGCTTCGCGCAAACCTTCATGCCGCGCGGCCGCGC GCCGGAAGTGAGTGAACTGGTGCGCTTTCCCGGCCATGCGAAGACGCTGCGCAAGCTCGCCGAGCAAGGCCCGCGCGCGT ACTACGAAGGTGAAATCGCCGAACGGATCGCCGCATTTTCGCGCGAAGGCGGCGGCGCACTGACCGCCGAGGATCTGCGC AACTATCGCGCGGATTGGGTCGAGCCGATCGGCAAGGACTATCGCGGCTACACGGTGCACGAGATTCCGCCGAACGGGCA GGGCATTGCGGCGCTGATCGCGCTGGGCATCCTCGAAAAATTCGATGTCAAGGAACTGGCGGTCGACAACGTCGAGTCGC AGCACCTGCAGATCGAAGCGATGAAGCTGGCGTTCGCCGACGTCTACCGCTACGTGGCGGATCCGCGTTCGATGGACGTC ACGCCCGAGCAGATGCTCGACGACGCATACCTCACCTCGCGCGCGAAACTGATCGATCACAAGCGCGCTACGCAGTTCGA CTTCGGCATGCCGAAGGCCGGCGGCACGATCTACATGTCGGTGGCGGACGAGCGCGGCATGATGGTCAGCTTCATCCAGT CGAACTACATGGGCTTCGGCTCGGGCATCGTGGTGCCGGATAGCGGCATCGCCATGCAGAACCGTGGCTGCGGCTTCTCG ATGGACCCGAAGTCGCCGAACGTGGTGGAAGGCGGTAAGCGGCCGTTCCACACGATCATCCCGTCGTTCCTCACGCAGCA GGTGAATGGGCAGCAGGAAGCGGTGATGAGCTTCGGCGTGATGGGCGGCGACATGCAGCCGCAAGGTCATCTGCAATCCA TCGTGCGGATGCTCGACTACGGTCAGCAGCCGCAGGCCGCGTGCGACGCGCCGCGCTGGAAGGTCAATCGCGACTTCACG ATCGACATCGAATCGACACTCGATCCGAAGACCGCCGAGGCCTTGCAGAAGCTCGGCCATACGATCAAATCGGTCGACGA TCCGTACATGGACTTCGGCTCCGGCCAGTACATCTGGAAGCTCGATCGCAACGAGCCGGAGCGCGGCTATGTGGCGGCGA GCGACAGCCGCCGCGACGGGCTGGCCGCCGGGTTCTAG
Upstream 100 bases:
>100_bases ATTCCGCGTTGACTTGTGCTTCACTCCGTCCACCCCATTCGCCCCGTTTCCATTGGTTCCGCGTTCCGCAGGCCGGGCCG CGCTTTCTAGAGTGTTCGAC
Downstream 100 bases:
>100_bases AAAAGGCATCCATTGGCGAAGCGGCCGCCCGGTGAGGCGGCGCTTCGCTGTGCACGCACGCGAGGCTTCGTGCATCGCTC GCGGCGCGATTGATCGACTG
Product: gamma-glutamyltransferase 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 545; Mature: 544
Protein sequence:
>545_residues MTGFNWQNPYPTPRLPVFARNIVSTSHPLAAQAGLRMLWKGGNAVDAAIAAAAAITVVEPVSCGLGSDAFALVWDGKKLH GLNASGVSPAAWNVDYFKRKYGEENGLAKQPKRGWDAVTVPGVIAGWEALHQKFGTLPFADLMEPAIEIAERGHAVASIV AYKWAAAVPELKDLPGFAQTFMPRGRAPEVSELVRFPGHAKTLRKLAEQGPRAYYEGEIAERIAAFSREGGGALTAEDLR NYRADWVEPIGKDYRGYTVHEIPPNGQGIAALIALGILEKFDVKELAVDNVESQHLQIEAMKLAFADVYRYVADPRSMDV TPEQMLDDAYLTSRAKLIDHKRATQFDFGMPKAGGTIYMSVADERGMMVSFIQSNYMGFGSGIVVPDSGIAMQNRGCGFS MDPKSPNVVEGGKRPFHTIIPSFLTQQVNGQQEAVMSFGVMGGDMQPQGHLQSIVRMLDYGQQPQAACDAPRWKVNRDFT IDIESTLDPKTAEALQKLGHTIKSVDDPYMDFGSGQYIWKLDRNEPERGYVAASDSRRDGLAAGF
Sequences:
>Translated_545_residues MTGFNWQNPYPTPRLPVFARNIVSTSHPLAAQAGLRMLWKGGNAVDAAIAAAAAITVVEPVSCGLGSDAFALVWDGKKLH GLNASGVSPAAWNVDYFKRKYGEENGLAKQPKRGWDAVTVPGVIAGWEALHQKFGTLPFADLMEPAIEIAERGHAVASIV AYKWAAAVPELKDLPGFAQTFMPRGRAPEVSELVRFPGHAKTLRKLAEQGPRAYYEGEIAERIAAFSREGGGALTAEDLR NYRADWVEPIGKDYRGYTVHEIPPNGQGIAALIALGILEKFDVKELAVDNVESQHLQIEAMKLAFADVYRYVADPRSMDV TPEQMLDDAYLTSRAKLIDHKRATQFDFGMPKAGGTIYMSVADERGMMVSFIQSNYMGFGSGIVVPDSGIAMQNRGCGFS MDPKSPNVVEGGKRPFHTIIPSFLTQQVNGQQEAVMSFGVMGGDMQPQGHLQSIVRMLDYGQQPQAACDAPRWKVNRDFT IDIESTLDPKTAEALQKLGHTIKSVDDPYMDFGSGQYIWKLDRNEPERGYVAASDSRRDGLAAGF >Mature_544_residues TGFNWQNPYPTPRLPVFARNIVSTSHPLAAQAGLRMLWKGGNAVDAAIAAAAAITVVEPVSCGLGSDAFALVWDGKKLHG LNASGVSPAAWNVDYFKRKYGEENGLAKQPKRGWDAVTVPGVIAGWEALHQKFGTLPFADLMEPAIEIAERGHAVASIVA YKWAAAVPELKDLPGFAQTFMPRGRAPEVSELVRFPGHAKTLRKLAEQGPRAYYEGEIAERIAAFSREGGGALTAEDLRN YRADWVEPIGKDYRGYTVHEIPPNGQGIAALIALGILEKFDVKELAVDNVESQHLQIEAMKLAFADVYRYVADPRSMDVT PEQMLDDAYLTSRAKLIDHKRATQFDFGMPKAGGTIYMSVADERGMMVSFIQSNYMGFGSGIVVPDSGIAMQNRGCGFSM DPKSPNVVEGGKRPFHTIIPSFLTQQVNGQQEAVMSFGVMGGDMQPQGHLQSIVRMLDYGQQPQAACDAPRWKVNRDFTI DIESTLDPKTAEALQKLGHTIKSVDDPYMDFGSGQYIWKLDRNEPERGYVAASDSRRDGLAAGF
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=555, Percent_Identity=27.9279279279279, Blast_Score=165, Evalue=9e-41, Organism=Homo sapiens, GI73915090, Length=555, Percent_Identity=27.9279279279279, Blast_Score=165, Evalue=9e-41, Organism=Homo sapiens, GI73915096, Length=555, Percent_Identity=27.9279279279279, Blast_Score=165, Evalue=9e-41, Organism=Homo sapiens, GI73915094, Length=555, Percent_Identity=27.9279279279279, Blast_Score=165, Evalue=9e-41, Organism=Homo sapiens, GI113429324, Length=554, Percent_Identity=26.7148014440433, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI113429326, Length=566, Percent_Identity=27.0318021201413, Blast_Score=150, Evalue=3e-36, Organism=Homo sapiens, GI109148539, Length=518, Percent_Identity=28.5714285714286, Blast_Score=146, Evalue=6e-35, Organism=Homo sapiens, GI153266885, Length=554, Percent_Identity=24.3682310469314, Blast_Score=120, Evalue=4e-27, Organism=Homo sapiens, GI153266901, Length=555, Percent_Identity=24.3243243243243, Blast_Score=116, Evalue=4e-26, Organism=Homo sapiens, GI153266907, Length=552, Percent_Identity=24.0942028985507, Blast_Score=111, Evalue=1e-24, Organism=Escherichia coli, GI1789856, Length=557, Percent_Identity=30.5206463195691, Blast_Score=195, Evalue=6e-51, Organism=Caenorhabditis elegans, GI212646519, Length=528, Percent_Identity=26.5151515151515, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI72000294, Length=528, Percent_Identity=26.5151515151515, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17542894, Length=562, Percent_Identity=25.6227758007117, Blast_Score=122, Evalue=4e-28, Organism=Caenorhabditis elegans, GI17506189, Length=546, Percent_Identity=23.992673992674, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI193208245, Length=509, Percent_Identity=24.75442043222, Blast_Score=108, Evalue=6e-24, Organism=Caenorhabditis elegans, GI193208247, Length=509, Percent_Identity=24.75442043222, Blast_Score=108, Evalue=7e-24, Organism=Drosophila melanogaster, GI24642670, Length=564, Percent_Identity=27.1276595744681, Blast_Score=159, Evalue=5e-39, Organism=Drosophila melanogaster, GI24642666, Length=564, Percent_Identity=27.1276595744681, Blast_Score=159, Evalue=5e-39, Organism=Drosophila melanogaster, GI161077878, Length=564, Percent_Identity=27.3049645390071, Blast_Score=159, Evalue=6e-39, Organism=Drosophila melanogaster, GI45551474, Length=564, Percent_Identity=27.3049645390071, Blast_Score=158, Evalue=7e-39, Organism=Drosophila melanogaster, GI161077880, Length=564, Percent_Identity=27.3049645390071, Blast_Score=158, Evalue=1e-38, Organism=Drosophila melanogaster, GI18859893, Length=530, Percent_Identity=26.6037735849057, Blast_Score=140, Evalue=3e-33, Organism=Drosophila melanogaster, GI18859741, Length=489, Percent_Identity=26.1758691206544, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI161077496, Length=511, Percent_Identity=24.853228962818, Blast_Score=106, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 59562; Mature: 59431
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGFNWQNPYPTPRLPVFARNIVSTSHPLAAQAGLRMLWKGGNAVDAAIAAAAAITVVEP CCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHCHHHEECCCCHHHHHHHHHHHHHHCCH VSCGLGSDAFALVWDGKKLHGLNASGVSPAAWNVDYFKRKYGEENGLAKQPKRGWDAVTV HCCCCCCCCEEEEECCCEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEC PGVIAGWEALHQKFGTLPFADLMEPAIEIAERGHAVASIVAYKWAAAVPELKDLPGFAQT CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHCCCHHHH FMPRGRAPEVSELVRFPGHAKTLRKLAEQGPRAYYEGEIAERIAAFSREGGGALTAEDLR HCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCEECHHHHHHHHHHHCCCCCCCCHHHHH NYRADWVEPIGKDYRGYTVHEIPPNGQGIAALIALGILEKFDVKELAVDNVESQHLQIEA HHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCHHEEHHH MKLAFADVYRYVADPRSMDVTPEQMLDDAYLTSRAKLIDHKRATQFDFGMPKAGGTIYMS HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE VADERGMMVSFIQSNYMGFGSGIVVPDSGIAMQNRGCGFSMDPKSPNVVEGGKRPFHTII ECCCCCHHHHHHHHCCCCCCCCEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHH PSFLTQQVNGQQEAVMSFGVMGGDMQPQGHLQSIVRMLDYGQQPQAACDAPRWKVNRDFT HHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHCCCCEECCCCEE IDIESTLDPKTAEALQKLGHTIKSVDDPYMDFGSGQYIWKLDRNEPERGYVAASDSRRDG EEECCCCCCHHHHHHHHHHHHHHHCCCCHHCCCCCCEEEEECCCCCCCCEEEECCCCCCC LAAGF CCCCC >Mature Secondary Structure TGFNWQNPYPTPRLPVFARNIVSTSHPLAAQAGLRMLWKGGNAVDAAIAAAAAITVVEP CCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHCHHHEECCCCHHHHHHHHHHHHHHCCH VSCGLGSDAFALVWDGKKLHGLNASGVSPAAWNVDYFKRKYGEENGLAKQPKRGWDAVTV HCCCCCCCCEEEEECCCEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEC PGVIAGWEALHQKFGTLPFADLMEPAIEIAERGHAVASIVAYKWAAAVPELKDLPGFAQT CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHCCCHHHH FMPRGRAPEVSELVRFPGHAKTLRKLAEQGPRAYYEGEIAERIAAFSREGGGALTAEDLR HCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCEECHHHHHHHHHHHCCCCCCCCHHHHH NYRADWVEPIGKDYRGYTVHEIPPNGQGIAALIALGILEKFDVKELAVDNVESQHLQIEA HHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCHHEEHHH MKLAFADVYRYVADPRSMDVTPEQMLDDAYLTSRAKLIDHKRATQFDFGMPKAGGTIYMS HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE VADERGMMVSFIQSNYMGFGSGIVVPDSGIAMQNRGCGFSMDPKSPNVVEGGKRPFHTII ECCCCCHHHHHHHHCCCCCCCCEEECCCCCEECCCCCCCCCCCCCCCCCCCCCCCHHHHH PSFLTQQVNGQQEAVMSFGVMGGDMQPQGHLQSIVRMLDYGQQPQAACDAPRWKVNRDFT HHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHCCCCEECCCCEE IDIESTLDPKTAEALQKLGHTIKSVDDPYMDFGSGQYIWKLDRNEPERGYVAASDSRRDG EEECCCCCCHHHHHHHHHHHHHHHCCCCHHCCCCCCEEEEECCCCCCCCEEEECCCCCCC LAAGF CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]