Click here to switch to the map view.

The map label for this gene is yobA [H]

Identifier: 91785128

GI number: 91785128

Start: 4161831

End: 4162208

Strand: Reverse

Name: yobA [H]

Synonym: Bxe_A0652

Alternate gene names: 91785128

Gene position: 4162208-4161831 (Counterclockwise)

Preceding gene: 91785133

Following gene: 91785127

Centisome position: 85.02

GC content: 65.87

Gene sequence:

>378_bases
ATGAAGCTACCCAAATTTTCCCGTCCGGCGCTGCGAGCGCCGATGCTCGGCGCCCTGGCGCTAGTTGCGACGTCCACGGC
ATTCGCCCATGCGCATCTGATGTCGAGCCAGCCGGCCGCAAACGCCGAAGTCGTCGCGCCTGCCGAAGTGACGATCCATT
TCACCGAACCGCTCGAACCGGCTTTCAGCAAGATCGCGCTTGCCGACGCGAGCGGTAACACGGCCGCGCCGGCTGCGTCG
CAGGTCGACCCGGGCGACGCCAGGGTCATGCATCTGCCGCTGCCGCAGCTGAATGCCGGGCGCTATGCGGTGCACTGGAC
GGCGGTAGCCACGGATGGCCACCGGACCCAAGGCGACTTTGCGTTCATCGTCAAATGA

Upstream 100 bases:

>100_bases
CCATCGAAGCGTACACTTCCGGGCGCGCCGGCCTCCATCCGGCCGGGAATGCCCGGGTCCGACGCCCACTGTTTTCCTGA
TCATCCCCTATCGGCCTCAC

Downstream 100 bases:

>100_bases
GCATCGACGGACTCTGGATCGGGCAGGTCGCAATGGCCGCGCTCATGAATGTCGCGTTTGCGTTTGCGGTCGGTTCGGCG
TTGCTCGGCGCGTGGCTCGC

Product: putative copper resistance protein, CopC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MKLPKFSRPALRAPMLGALALVATSTAFAHAHLMSSQPAANAEVVAPAEVTIHFTEPLEPAFSKIALADASGNTAAPAAS
QVDPGDARVMHLPLPQLNAGRYAVHWTAVATDGHRTQGDFAFIVK

Sequences:

>Translated_125_residues
MKLPKFSRPALRAPMLGALALVATSTAFAHAHLMSSQPAANAEVVAPAEVTIHFTEPLEPAFSKIALADASGNTAAPAAS
QVDPGDARVMHLPLPQLNAGRYAVHWTAVATDGHRTQGDFAFIVK
>Mature_125_residues
MKLPKFSRPALRAPMLGALALVATSTAFAHAHLMSSQPAANAEVVAPAEVTIHFTEPLEPAFSKIALADASGNTAAPAAS
QVDPGDARVMHLPLPQLNAGRYAVHWTAVATDGHRTQGDFAFIVK

Specific function: Unknown

COG id: COG2372

COG function: function code R; Uncharacterized protein, homolog of Cu resistance protein CopC

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CopC family [H]

Homologues:

Organism=Escherichia coli, GI1788146, Length=114, Percent_Identity=35.9649122807018, Blast_Score=69, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007348
- InterPro:   IPR014755
- InterPro:   IPR014756 [H]

Pfam domain/function: PF04234 CopC [H]

EC number: NA

Molecular weight: Translated: 13063; Mature: 13063

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLPKFSRPALRAPMLGALALVATSTAFAHAHLMSSQPAANAEVVAPAEVTIHFTEPLEP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEEECCCCCC
AFSKIALADASGNTAAPAASQVDPGDARVMHLPLPQLNAGRYAVHWTAVATDGHRTQGDF
HHHEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCE
AFIVK
EEEEC
>Mature Secondary Structure
MKLPKFSRPALRAPMLGALALVATSTAFAHAHLMSSQPAANAEVVAPAEVTIHFTEPLEP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCEEEEEECCCCCC
AFSKIALADASGNTAAPAASQVDPGDARVMHLPLPQLNAGRYAVHWTAVATDGHRTQGDF
HHHEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCE
AFIVK
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Cu [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]