| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91785127
Identifier: 91785127
GI number: 91785127
Start: 4160905
End: 4161834
Strand: Reverse
Name: 91785127
Synonym: Bxe_A0653
Alternate gene names: NA
Gene position: 4161834-4160905 (Counterclockwise)
Preceding gene: 91785128
Following gene: 91785123
Centisome position: 85.01
GC content: 67.85
Gene sequence:
>930_bases ATGAGCATCGACGGACTCTGGATCGGGCAGGTCGCAATGGCCGCGCTCATGAATGTCGCGTTTGCGTTTGCGGTCGGTTC GGCGTTGCTCGGCGCGTGGCTCGCGAAGGACGCCCAGCAGAAGATCTCGCCCGCGCGTCCCGCCTGGTTGCGCGCGCAAC GCTCGATGTTGACGGCGACGGTCGTGCTGGTGCTCGCGGACCTCGGCTGGCTGTTGTATCAGGCGGCGTCGATGGGCGGT GTCGCATTGCCGGCCGCGATCGGCGTGGTGCCGACCGTGCTCACGCAAACCCATGTCGGCTATGGCTGGAGCCTCGCGTT TGCTGGCGCGCTGGTATTGCTCGGCACGGCGATGGCCAGTCATACCGGCATGCTGCGCAATGCGCTGCTGTGGCTGGCGG TGATCGCGGTCGCCGCGGGCAAGGCCTCGCTGGGACATGCGGCCGATGCCGGGCCGGCCTCGGCCGCGATTGCCATGCAA ACGCTGCACGTGCTCGTCACCAGTGTGTGGGGCGGGCTGGCGATGGCGGCGGGGCTTGCAGTTCTGCCGGCGCTCGGCAC CTCGACCGCGCGCGGCATGTTGATCCGCACGGCGACTCAGGTATCGAATGTTTCGGTGGTGGCGGTTGCGCTGGTGCTGC TCTCCGGCATCTTCAACGCGGTGCGGGGTTCGGGCGGCTCGTTCGAGGCGATCGAGCTGAGCACGTGGGGCCATGTGCTG ATGCTCAAGCTCGCGCTTGTCGCGCTCGCGCTCGTGCTCGGCGGACTCAACCGTTTTTCGGCGCTGCCGCGCCTGCGCCG TACGGCCTCGACAATGGACGCCCATACGTTCGTCAACGTGCTGTATCTGGAAGCACTGGCAATGATCGGCGCGTTCGTCG CGGCGGCCGCGCTGTCGCATAGCGTGCCGGCGTTTGCCGCGCTCGGTTGA
Upstream 100 bases:
>100_bases TGCCGCTGCCGCAGCTGAATGCCGGGCGCTATGCGGTGCACTGGACGGCGGTAGCCACGGATGGCCACCGGACCCAAGGC GACTTTGCGTTCATCGTCAA
Downstream 100 bases:
>100_bases GACCGTGGCGCGAGATGGCCGGCGGGACTGGCGGCATGTCCGCCGCCATTTGAGCTTCGAGCGCGTCCGCATTGGCTCAA GTCTGCAAAGACTCGCCCGC
Product: putative copper-resistance transporter, CopD
Products: NA
Alternate protein names: Copper Resistance D Domain-Containing Protein; Copper Resistance D; Copper Resistance Protein
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MSIDGLWIGQVAMAALMNVAFAFAVGSALLGAWLAKDAQQKISPARPAWLRAQRSMLTATVVLVLADLGWLLYQAASMGG VALPAAIGVVPTVLTQTHVGYGWSLAFAGALVLLGTAMASHTGMLRNALLWLAVIAVAAGKASLGHAADAGPASAAIAMQ TLHVLVTSVWGGLAMAAGLAVLPALGTSTARGMLIRTATQVSNVSVVAVALVLLSGIFNAVRGSGGSFEAIELSTWGHVL MLKLALVALALVLGGLNRFSALPRLRRTASTMDAHTFVNVLYLEALAMIGAFVAAAALSHSVPAFAALG
Sequences:
>Translated_309_residues MSIDGLWIGQVAMAALMNVAFAFAVGSALLGAWLAKDAQQKISPARPAWLRAQRSMLTATVVLVLADLGWLLYQAASMGG VALPAAIGVVPTVLTQTHVGYGWSLAFAGALVLLGTAMASHTGMLRNALLWLAVIAVAAGKASLGHAADAGPASAAIAMQ TLHVLVTSVWGGLAMAAGLAVLPALGTSTARGMLIRTATQVSNVSVVAVALVLLSGIFNAVRGSGGSFEAIELSTWGHVL MLKLALVALALVLGGLNRFSALPRLRRTASTMDAHTFVNVLYLEALAMIGAFVAAAALSHSVPAFAALG >Mature_308_residues SIDGLWIGQVAMAALMNVAFAFAVGSALLGAWLAKDAQQKISPARPAWLRAQRSMLTATVVLVLADLGWLLYQAASMGGV ALPAAIGVVPTVLTQTHVGYGWSLAFAGALVLLGTAMASHTGMLRNALLWLAVIAVAAGKASLGHAADAGPASAAIAMQT LHVLVTSVWGGLAMAAGLAVLPALGTSTARGMLIRTATQVSNVSVVAVALVLLSGIFNAVRGSGGSFEAIELSTWGHVLM LKLALVALALVLGGLNRFSALPRLRRTASTMDAHTFVNVLYLEALAMIGAFVAAAALSHSVPAFAALG
Specific function: Unknown
COG id: COG1276
COG function: function code P; Putative copper export protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31396; Mature: 31264
Theoretical pI: Translated: 11.15; Mature: 11.15
Prosite motif: PS00041 HTH_ARAC_FAMILY_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIDGLWIGQVAMAALMNVAFAFAVGSALLGAWLAKDAQQKISPARPAWLRAQRSMLTAT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH VVLVLADLGWLLYQAASMGGVALPAAIGVVPTVLTQTHVGYGWSLAFAGALVLLGTAMAS HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH HTGMLRNALLWLAVIAVAAGKASLGHAADAGPASAAIAMQTLHVLVTSVWGGLAMAAGLA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLPALGTSTARGMLIRTATQVSNVSVVAVALVLLSGIFNAVRGSGGSFEAIELSTWGHVL HHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHH MLKLALVALALVLGGLNRFSALPRLRRTASTMDAHTFVNVLYLEALAMIGAFVAAAALSH HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SVPAFAALG CCCHHHCCC >Mature Secondary Structure SIDGLWIGQVAMAALMNVAFAFAVGSALLGAWLAKDAQQKISPARPAWLRAQRSMLTAT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH VVLVLADLGWLLYQAASMGGVALPAAIGVVPTVLTQTHVGYGWSLAFAGALVLLGTAMAS HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH HTGMLRNALLWLAVIAVAAGKASLGHAADAGPASAAIAMQTLHVLVTSVWGGLAMAAGLA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLPALGTSTARGMLIRTATQVSNVSVVAVALVLLSGIFNAVRGSGGSFEAIELSTWGHVL HHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHH MLKLALVALALVLGGLNRFSALPRLRRTASTMDAHTFVNVLYLEALAMIGAFVAAAALSH HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SVPAFAALG CCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA