Definition Burkholderia xenovorans LB400 chromosome 1, complete sequence.
Accession NC_007951
Length 4,895,836

Click here to switch to the map view.

The map label for this gene is 91785127

Identifier: 91785127

GI number: 91785127

Start: 4160905

End: 4161834

Strand: Reverse

Name: 91785127

Synonym: Bxe_A0653

Alternate gene names: NA

Gene position: 4161834-4160905 (Counterclockwise)

Preceding gene: 91785128

Following gene: 91785123

Centisome position: 85.01

GC content: 67.85

Gene sequence:

>930_bases
ATGAGCATCGACGGACTCTGGATCGGGCAGGTCGCAATGGCCGCGCTCATGAATGTCGCGTTTGCGTTTGCGGTCGGTTC
GGCGTTGCTCGGCGCGTGGCTCGCGAAGGACGCCCAGCAGAAGATCTCGCCCGCGCGTCCCGCCTGGTTGCGCGCGCAAC
GCTCGATGTTGACGGCGACGGTCGTGCTGGTGCTCGCGGACCTCGGCTGGCTGTTGTATCAGGCGGCGTCGATGGGCGGT
GTCGCATTGCCGGCCGCGATCGGCGTGGTGCCGACCGTGCTCACGCAAACCCATGTCGGCTATGGCTGGAGCCTCGCGTT
TGCTGGCGCGCTGGTATTGCTCGGCACGGCGATGGCCAGTCATACCGGCATGCTGCGCAATGCGCTGCTGTGGCTGGCGG
TGATCGCGGTCGCCGCGGGCAAGGCCTCGCTGGGACATGCGGCCGATGCCGGGCCGGCCTCGGCCGCGATTGCCATGCAA
ACGCTGCACGTGCTCGTCACCAGTGTGTGGGGCGGGCTGGCGATGGCGGCGGGGCTTGCAGTTCTGCCGGCGCTCGGCAC
CTCGACCGCGCGCGGCATGTTGATCCGCACGGCGACTCAGGTATCGAATGTTTCGGTGGTGGCGGTTGCGCTGGTGCTGC
TCTCCGGCATCTTCAACGCGGTGCGGGGTTCGGGCGGCTCGTTCGAGGCGATCGAGCTGAGCACGTGGGGCCATGTGCTG
ATGCTCAAGCTCGCGCTTGTCGCGCTCGCGCTCGTGCTCGGCGGACTCAACCGTTTTTCGGCGCTGCCGCGCCTGCGCCG
TACGGCCTCGACAATGGACGCCCATACGTTCGTCAACGTGCTGTATCTGGAAGCACTGGCAATGATCGGCGCGTTCGTCG
CGGCGGCCGCGCTGTCGCATAGCGTGCCGGCGTTTGCCGCGCTCGGTTGA

Upstream 100 bases:

>100_bases
TGCCGCTGCCGCAGCTGAATGCCGGGCGCTATGCGGTGCACTGGACGGCGGTAGCCACGGATGGCCACCGGACCCAAGGC
GACTTTGCGTTCATCGTCAA

Downstream 100 bases:

>100_bases
GACCGTGGCGCGAGATGGCCGGCGGGACTGGCGGCATGTCCGCCGCCATTTGAGCTTCGAGCGCGTCCGCATTGGCTCAA
GTCTGCAAAGACTCGCCCGC

Product: putative copper-resistance transporter, CopD

Products: NA

Alternate protein names: Copper Resistance D Domain-Containing Protein; Copper Resistance D; Copper Resistance Protein

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MSIDGLWIGQVAMAALMNVAFAFAVGSALLGAWLAKDAQQKISPARPAWLRAQRSMLTATVVLVLADLGWLLYQAASMGG
VALPAAIGVVPTVLTQTHVGYGWSLAFAGALVLLGTAMASHTGMLRNALLWLAVIAVAAGKASLGHAADAGPASAAIAMQ
TLHVLVTSVWGGLAMAAGLAVLPALGTSTARGMLIRTATQVSNVSVVAVALVLLSGIFNAVRGSGGSFEAIELSTWGHVL
MLKLALVALALVLGGLNRFSALPRLRRTASTMDAHTFVNVLYLEALAMIGAFVAAAALSHSVPAFAALG

Sequences:

>Translated_309_residues
MSIDGLWIGQVAMAALMNVAFAFAVGSALLGAWLAKDAQQKISPARPAWLRAQRSMLTATVVLVLADLGWLLYQAASMGG
VALPAAIGVVPTVLTQTHVGYGWSLAFAGALVLLGTAMASHTGMLRNALLWLAVIAVAAGKASLGHAADAGPASAAIAMQ
TLHVLVTSVWGGLAMAAGLAVLPALGTSTARGMLIRTATQVSNVSVVAVALVLLSGIFNAVRGSGGSFEAIELSTWGHVL
MLKLALVALALVLGGLNRFSALPRLRRTASTMDAHTFVNVLYLEALAMIGAFVAAAALSHSVPAFAALG
>Mature_308_residues
SIDGLWIGQVAMAALMNVAFAFAVGSALLGAWLAKDAQQKISPARPAWLRAQRSMLTATVVLVLADLGWLLYQAASMGGV
ALPAAIGVVPTVLTQTHVGYGWSLAFAGALVLLGTAMASHTGMLRNALLWLAVIAVAAGKASLGHAADAGPASAAIAMQT
LHVLVTSVWGGLAMAAGLAVLPALGTSTARGMLIRTATQVSNVSVVAVALVLLSGIFNAVRGSGGSFEAIELSTWGHVLM
LKLALVALALVLGGLNRFSALPRLRRTASTMDAHTFVNVLYLEALAMIGAFVAAAALSHSVPAFAALG

Specific function: Unknown

COG id: COG1276

COG function: function code P; Putative copper export protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31396; Mature: 31264

Theoretical pI: Translated: 11.15; Mature: 11.15

Prosite motif: PS00041 HTH_ARAC_FAMILY_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIDGLWIGQVAMAALMNVAFAFAVGSALLGAWLAKDAQQKISPARPAWLRAQRSMLTAT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
VVLVLADLGWLLYQAASMGGVALPAAIGVVPTVLTQTHVGYGWSLAFAGALVLLGTAMAS
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
HTGMLRNALLWLAVIAVAAGKASLGHAADAGPASAAIAMQTLHVLVTSVWGGLAMAAGLA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLPALGTSTARGMLIRTATQVSNVSVVAVALVLLSGIFNAVRGSGGSFEAIELSTWGHVL
HHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHH
MLKLALVALALVLGGLNRFSALPRLRRTASTMDAHTFVNVLYLEALAMIGAFVAAAALSH
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SVPAFAALG
CCCHHHCCC
>Mature Secondary Structure 
SIDGLWIGQVAMAALMNVAFAFAVGSALLGAWLAKDAQQKISPARPAWLRAQRSMLTAT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
VVLVLADLGWLLYQAASMGGVALPAAIGVVPTVLTQTHVGYGWSLAFAGALVLLGTAMAS
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
HTGMLRNALLWLAVIAVAAGKASLGHAADAGPASAAIAMQTLHVLVTSVWGGLAMAAGLA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLPALGTSTARGMLIRTATQVSNVSVVAVALVLLSGIFNAVRGSGGSFEAIELSTWGHVL
HHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHH
MLKLALVALALVLGGLNRFSALPRLRRTASTMDAHTFVNVLYLEALAMIGAFVAAAALSH
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SVPAFAALG
CCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA