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The map label for this gene is yieP [H]

Identifier: 91785123

GI number: 91785123

Start: 4157789

End: 4158574

Strand: Reverse

Name: yieP [H]

Synonym: Bxe_A0657

Alternate gene names: 91785123

Gene position: 4158574-4157789 (Counterclockwise)

Preceding gene: 91785127

Following gene: 91785121

Centisome position: 84.94

GC content: 64.89

Gene sequence:

>786_bases
ATGGCGTTGTCGAAGCGGTGGGTGTCACGGTCGAGATGCCGGATAATCGCGCTCGTTCCGGGCCTGGTTCCGATATCGAT
AGCGCCGCAAGGCAGCTGGGAGAAAGCTATTCAGCATGATCTGCATGGGCGTGTCGCCCATCTGCTGGCAACCGCGATTC
TGCGCGGCGACTATGCGCCCGAGTCGATCCTGCCGCGCGAAGCGGCGTTGATGGAAACCTTCGGCGTGAGCCGCACGGTG
TTGCGCGAAGCGTTGCGCACGCTCACGTCGAAAGGCCTGATCGAATCGCGTCCGCGCGTGGGCACGCGGGTGCGGCCGAA
GCGCGCGTGGAATCTGCTCGATGTCGACGTGCTCGACTGGTACTCGCGGGTTGCCGAGCCGATGGCGTTCGCGCTCAAGC
TGCAGGAAATGCGCGAGATGATCGAGCCGTACGCGGCGGGTCTGGCAGCGGCCTCGCATACGGACGACACCTTCCGGGCA
CTCGCCTTGGCTCATGCGGCCATGATCGCGGCGCGCAATGTCGACGAATGGGTGCGCGCCGATCTGCAGTTTCATTTGAG
CGTGCTGATTGCGTGCAGCAATGAATTGCTGATCCCGCTCGGCACGCTGATCGAGCGGACGCTCGAAGCGCAACTGCGCC
TGAACGCGAAACGCGCGGACGTGTTCAATGCGTCGCTGGCGGAGCATACGGCCGTATTCGAAGCCATTCGCGATCGCGAC
GCCGCCGCGGCGCGCGCGGCGATGGCGGGACTTCTAGGTGTGACACGCGCCCGCATCGAGGCCTAG

Upstream 100 bases:

>100_bases
CGCCTGCGAATATTTCGAGGATTCACATGCTACAACAAAAGCGCTTTTAAATACTATCAATAGTACTATTGGTCAAATAG
TGCGACGTCGTCTCCTCCAC

Downstream 100 bases:

>100_bases
GCGTCAGCCTCGCGGCTGGCCACGCCGCCGCGCTTCAATCCATCGCGGCGTGCGCCACCGACGCGTCCGGCGCCTTGTGC
GCGGGGCGGATCAGCAGAAG

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MALSKRWVSRSRCRIIALVPGLVPISIAPQGSWEKAIQHDLHGRVAHLLATAILRGDYAPESILPREAALMETFGVSRTV
LREALRTLTSKGLIESRPRVGTRVRPKRAWNLLDVDVLDWYSRVAEPMAFALKLQEMREMIEPYAAGLAAASHTDDTFRA
LALAHAAMIAARNVDEWVRADLQFHLSVLIACSNELLIPLGTLIERTLEAQLRLNAKRADVFNASLAEHTAVFEAIRDRD
AAAARAAMAGLLGVTRARIEA

Sequences:

>Translated_261_residues
MALSKRWVSRSRCRIIALVPGLVPISIAPQGSWEKAIQHDLHGRVAHLLATAILRGDYAPESILPREAALMETFGVSRTV
LREALRTLTSKGLIESRPRVGTRVRPKRAWNLLDVDVLDWYSRVAEPMAFALKLQEMREMIEPYAAGLAAASHTDDTFRA
LALAHAAMIAARNVDEWVRADLQFHLSVLIACSNELLIPLGTLIERTLEAQLRLNAKRADVFNASLAEHTAVFEAIRDRD
AAAARAAMAGLLGVTRARIEA
>Mature_260_residues
ALSKRWVSRSRCRIIALVPGLVPISIAPQGSWEKAIQHDLHGRVAHLLATAILRGDYAPESILPREAALMETFGVSRTVL
REALRTLTSKGLIESRPRVGTRVRPKRAWNLLDVDVLDWYSRVAEPMAFALKLQEMREMIEPYAAGLAAASHTDDTFRAL
ALAHAAMIAARNVDEWVRADLQFHLSVLIACSNELLIPLGTLIERTLEAQLRLNAKRADVFNASLAEHTAVFEAIRDRDA
AAARAAMAGLLGVTRARIEA

Specific function: Repressor For The Dgorkat Operon. Binds D-Galactonate As An Inducer. [C]

COG id: COG2186

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI48994961, Length=227, Percent_Identity=33.920704845815, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI48994955, Length=220, Percent_Identity=33.1818181818182, Blast_Score=100, Evalue=1e-22,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 28796; Mature: 28665

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALSKRWVSRSRCRIIALVPGLVPISIAPQGSWEKAIQHDLHGRVAHLLATAILRGDYAP
CCCCHHHHHHCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ESILPREAALMETFGVSRTVLREALRTLTSKGLIESRPRVGTRVRPKRAWNLLDVDVLDW
HHHCCHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHCCCHHHHHHHH
YSRVAEPMAFALKLQEMREMIEPYAAGLAAASHTDDTFRALALAHAAMIAARNVDEWVRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
DLQFHLSVLIACSNELLIPLGTLIERTLEAQLRLNAKRADVFNASLAEHTAVFEAIRDRD
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
AAAARAAMAGLLGVTRARIEA
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ALSKRWVSRSRCRIIALVPGLVPISIAPQGSWEKAIQHDLHGRVAHLLATAILRGDYAP
CCCHHHHHHCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ESILPREAALMETFGVSRTVLREALRTLTSKGLIESRPRVGTRVRPKRAWNLLDVDVLDW
HHHCCHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHCCCHHHHHHHH
YSRVAEPMAFALKLQEMREMIEPYAAGLAAASHTDDTFRALALAHAAMIAARNVDEWVRA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
DLQFHLSVLIACSNELLIPLGTLIERTLEAQLRLNAKRADVFNASLAEHTAVFEAIRDRD
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
AAAARAAMAGLLGVTRARIEA
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]