| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
Click here to switch to the map view.
The map label for this gene is yeaE [H]
Identifier: 91784996
GI number: 91784996
Start: 4013375
End: 4014220
Strand: Reverse
Name: yeaE [H]
Synonym: Bxe_A0784
Alternate gene names: 91784996
Gene position: 4014220-4013375 (Counterclockwise)
Preceding gene: 91784998
Following gene: 91784983
Centisome position: 81.99
GC content: 66.08
Gene sequence:
>846_bases ATGACGAGCGACATCGCAAGCGTGAGCCTGCCCGACGGCGAACGCATTCCGAAACTGGGACAGGGCACCTGGGAGATGGG TGAGGTGCCGGCGCGGCGTGCCGCTGAGATCGACGCGCTGCGTTGCGGCATCGAACTCGGCATGACGTTGATCGACACGG CGGAAATGTATGGCGACGGCGCGACCGAATCTCTGCTGGGCGTTGCGCTGGCCGGGTTGCGCGACAAGGTGTTTCTGGTC AGCAAGGTGTATCCGCATAACGCCAGCCGGCGCGGCGTGATCGCGGCCTGCGAGCAGAGCCTCAAGCGTCTGAAGACGGA TCAGCTCGATCTGTATCTGCTGCACTGGCGCGGCTCGGTGCCGCTCGCGGAAACGGTCGAGGGCTTCGAGGCGTTACGGC GGGCGGGCAAGATTCGCCACTGGGGCGTCAGCAACTTCGACACCGCGGACATGGAAGAACTCGTCGCCACGCCGGGCGGC GATGCGTGCGCAACCAATCAGATTCTCTACAACGTGGCGCGCCGCGGGCCGGAATTCGAACTGCTGCCGTGGCTCGCCGC GCGCAAGATGCCGGCTATGGCGTACAGCCCGGTCGATCACGCACGCTTGCCGAAACGCTCGCCGCTCGACAATATCGCCG ACGCGCGCGGCGTCTCGGTGTTCCAGGTGGCGCTCGCATGGGTGCTGCTCGCGCCCGGCGTGTTCGCGATTCCGAAGGCG GGGCGCGCCGAGCATGTGCGCGACAACCATCGCGCGGCGCAACTGCAACTCGGCGCGGATGAACTGGCTGCCATCGACGC GTATTTCAAACCGCCGCGCAGCAAGCGTCCGCTCGAAATGCTGTAA
Upstream 100 bases:
>100_bases CGTTGAACCGCTAAACTCGTCGCTATGTTTTCGTGGCATACGCCGCGCATTCGCCTGCGCTGAGGCATTGCCGACCATTG AGCCACTTCGAGGAGTCAGC
Downstream 100 bases:
>100_bases GCGCGGCGGCGCCCGTTTGCCGCGCGACGGACGGTTCGCCGCGGGCGGCGGCTTATCGATGGCGTCGCACGCGCAATGGC CGCGGCGGGCGCCTGATCAA
Product: aldo/keto reductase family oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MTSDIASVSLPDGERIPKLGQGTWEMGEVPARRAAEIDALRCGIELGMTLIDTAEMYGDGATESLLGVALAGLRDKVFLV SKVYPHNASRRGVIAACEQSLKRLKTDQLDLYLLHWRGSVPLAETVEGFEALRRAGKIRHWGVSNFDTADMEELVATPGG DACATNQILYNVARRGPEFELLPWLAARKMPAMAYSPVDHARLPKRSPLDNIADARGVSVFQVALAWVLLAPGVFAIPKA GRAEHVRDNHRAAQLQLGADELAAIDAYFKPPRSKRPLEML
Sequences:
>Translated_281_residues MTSDIASVSLPDGERIPKLGQGTWEMGEVPARRAAEIDALRCGIELGMTLIDTAEMYGDGATESLLGVALAGLRDKVFLV SKVYPHNASRRGVIAACEQSLKRLKTDQLDLYLLHWRGSVPLAETVEGFEALRRAGKIRHWGVSNFDTADMEELVATPGG DACATNQILYNVARRGPEFELLPWLAARKMPAMAYSPVDHARLPKRSPLDNIADARGVSVFQVALAWVLLAPGVFAIPKA GRAEHVRDNHRAAQLQLGADELAAIDAYFKPPRSKRPLEML >Mature_280_residues TSDIASVSLPDGERIPKLGQGTWEMGEVPARRAAEIDALRCGIELGMTLIDTAEMYGDGATESLLGVALAGLRDKVFLVS KVYPHNASRRGVIAACEQSLKRLKTDQLDLYLLHWRGSVPLAETVEGFEALRRAGKIRHWGVSNFDTADMEELVATPGGD ACATNQILYNVARRGPEFELLPWLAARKMPAMAYSPVDHARLPKRSPLDNIADARGVSVFQVALAWVLLAPGVFAIPKAG RAEHVRDNHRAAQLQLGADELAAIDAYFKPPRSKRPLEML
Specific function: Unknown
COG id: COG0656
COG function: function code R; Aldo/keto reductases, related to diketogulonate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI310109922, Length=287, Percent_Identity=29.2682926829268, Blast_Score=93, Evalue=2e-19, Organism=Homo sapiens, GI5453543, Length=307, Percent_Identity=28.3387622149837, Blast_Score=91, Evalue=8e-19, Organism=Homo sapiens, GI45446745, Length=307, Percent_Identity=28.3387622149837, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI4503285, Length=307, Percent_Identity=28.3387622149837, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI310109920, Length=307, Percent_Identity=28.3387622149837, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI24497583, Length=307, Percent_Identity=28.0130293159609, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI24497585, Length=305, Percent_Identity=26.8852459016393, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI223468663, Length=300, Percent_Identity=25.6666666666667, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI24497577, Length=310, Percent_Identity=24.5161290322581, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI5174391, Length=310, Percent_Identity=24.5161290322581, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI207028673, Length=127, Percent_Identity=36.2204724409449, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI310109926, Length=127, Percent_Identity=36.2204724409449, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI223718702, Length=168, Percent_Identity=30.952380952381, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI41327764, Length=165, Percent_Identity=32.7272727272727, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI1788081, Length=271, Percent_Identity=53.5055350553505, Blast_Score=291, Evalue=3e-80, Organism=Escherichia coli, GI1786400, Length=267, Percent_Identity=29.9625468164794, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI87081735, Length=297, Percent_Identity=25.9259259259259, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI87082198, Length=267, Percent_Identity=27.7153558052434, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI48994888, Length=273, Percent_Identity=29.6703296703297, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1788070, Length=300, Percent_Identity=27.6666666666667, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1787674, Length=258, Percent_Identity=26.7441860465116, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1789199, Length=172, Percent_Identity=34.8837209302326, Blast_Score=70, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17552492, Length=272, Percent_Identity=27.9411764705882, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17561298, Length=287, Percent_Identity=28.9198606271777, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI71998625, Length=286, Percent_Identity=24.4755244755245, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17538386, Length=283, Percent_Identity=27.5618374558304, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17566692, Length=168, Percent_Identity=30.3571428571429, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17550248, Length=173, Percent_Identity=27.7456647398844, Blast_Score=70, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6324694, Length=303, Percent_Identity=27.3927392739274, Blast_Score=88, Evalue=2e-18, Organism=Drosophila melanogaster, GI24657054, Length=307, Percent_Identity=25.7328990228013, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI45553081, Length=301, Percent_Identity=26.2458471760797, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24644950, Length=309, Percent_Identity=26.8608414239482, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI21356425, Length=313, Percent_Identity=24.6006389776358, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24662789, Length=311, Percent_Identity=25.08038585209, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI20129731, Length=308, Percent_Identity=24.6753246753247, Blast_Score=72, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 30689; Mature: 30557
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSDIASVSLPDGERIPKLGQGTWEMGEVPARRAAEIDALRCGIELGMTLIDTAEMYGDG CCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCC ATESLLGVALAGLRDKVFLVSKVYPHNASRRGVIAACEQSLKRLKTDQLDLYLLHWRGSV CHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCC PLAETVEGFEALRRAGKIRHWGVSNFDTADMEELVATPGGDACATNQILYNVARRGPEFE CHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC LLPWLAARKMPAMAYSPVDHARLPKRSPLDNIADARGVSVFQVALAWVLLAPGVFAIPKA HHHHHHHHCCCCHHCCCCHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCEECCCC GRAEHVRDNHRAAQLQLGADELAAIDAYFKPPRSKRPLEML CCHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TSDIASVSLPDGERIPKLGQGTWEMGEVPARRAAEIDALRCGIELGMTLIDTAEMYGDG CCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCC ATESLLGVALAGLRDKVFLVSKVYPHNASRRGVIAACEQSLKRLKTDQLDLYLLHWRGSV CHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCC PLAETVEGFEALRRAGKIRHWGVSNFDTADMEELVATPGGDACATNQILYNVARRGPEFE CHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC LLPWLAARKMPAMAYSPVDHARLPKRSPLDNIADARGVSVFQVALAWVLLAPGVFAIPKA HHHHHHHHCCCCHHCCCCHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCEECCCC GRAEHVRDNHRAAQLQLGADELAAIDAYFKPPRSKRPLEML CCHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]