| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is fabB [H]
Identifier: 91784851
GI number: 91784851
Start: 3850822
End: 3852063
Strand: Reverse
Name: fabB [H]
Synonym: Bxe_A0941
Alternate gene names: 91784851
Gene position: 3852063-3850822 (Counterclockwise)
Preceding gene: 91784852
Following gene: 91784850
Centisome position: 78.68
GC content: 69.0
Gene sequence:
>1242_bases ATGAGCATGGCGCTGCAACGCGTGGTCGTGACCGGTATGGGGATCGTGTCGTGTCTCGGCAATACGCTCGACGAAGTTGC CTCGGCGTTGCGCGCGGGCCGCTCGCGCATTCAGCGGATCGACGCCTGGCGAGAGCGCGGCTTCGCTTCCCAGGTGGCGG GCGTTGCGTCGGTTGCGCACGAACCGCCGTTTGAGCGCAAGCTCGAACGCTTCATGGGCGACACGGCGCGGTTCGCCTGT CACGCCGCGCGCAACGCGATCAGCGACGCCGGGCTCGATGCCGCGGCGTTGCGCTCGCCGCGCGCCGGCACGGTGATCGG TTCGGGCGTCGGCACGATGTCCACTTACGACGCGGCGATGGCAACCGCGCACGCTCGCGGTGTCGACAAGGTGCCGCCGT ACACGGTGCCGCATGCGATGAGCAGCACCGCGTCGGCGAACGTCGCGCAGGTGTTCGGGCTCGAAGGCGTCAGCTATTCG CCGTCATCGGCGTGTACGACCTCGGCGCTCGCGATCGGGCAGGCGATGCAGCTGATCCAGACCGGCCGCCAGCAGATCGT GCTGGCCGGCGGCAGCGAGTCGCTGCACGACAACATGACGCTCATGTTCGACGCAATGGGCGCGCTGTCGCGCCGCTTCA ACGACACGCCGCAGCGCGCATCGCGTCCTTATGACACGGAGCGCGACGGCTTCGTGATCGCGTCGGGTGGCGGCGTGCTG GTGCTCGAATCGCTCGAGTACGCGCTCGCACGCGGCGCGCGCATCTACGCGGAACTCACCGGATTCGGCGACTGCACGGA CAGCGCCGGCATGGTCGCGCCGCGCGCGGCGGGGATCGCGCGCGCCATGCGCGGCGCGCTGCATGAAGCGGGCAAGCGGC CCGATTACGTCAACACGCACGCACCGTCGACACCGCTCGGCGATACGGAGGAATTGCGCGCGTTGAGCGAAGTGTTCGGC GCGGCGTTCGATCGTCGCGTGCCGGCGTTTTCATCGACCAAGGGGATGACGGGGCATCCGCTCGGCGCTTGCGGCGCGCA CGAGGCGATCTACACGCTGCTGATGATGCGTGACGGCTTCATTGCTGGCACGGCGGGCATCGACACGCCGGAGCCGGCCG TCGACGGCATGCCGCTCGTGCGCGTCACGCGTGAGGCGCGTATCGACACGGCGATGTCGGTTTCATTCGGGTTCGGCGGC AGTTGCGCGAGCCTGGTGTTCGAAGCATGGCAGGGCGGCTGA
Upstream 100 bases:
>100_bases ACATCGCCGGCACGGGCCGGCAGATCGATGCCGAATACGTGATGAGCAACAACTTCGCGTTCGGCGGCATCAACACGTCG CTGATTTTCAGGCGCGTTCG
Downstream 100 bases:
>100_bases AACGGCCGCGACTTTAAAAAAAACGAGGGTAAGAAAAATGAAAAAAACAGCTGCATTGGGCGCACTGGCGGTGGTGGTGT TGACGCAGGCGGGATGCGCC
Product: 3-oxoacyl-[acyl-carrier-protein] synthase I
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase I; Beta-ketoacyl-ACP synthase I; KAS I [H]
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MSMALQRVVVTGMGIVSCLGNTLDEVASALRAGRSRIQRIDAWRERGFASQVAGVASVAHEPPFERKLERFMGDTARFAC HAARNAISDAGLDAAALRSPRAGTVIGSGVGTMSTYDAAMATAHARGVDKVPPYTVPHAMSSTASANVAQVFGLEGVSYS PSSACTTSALAIGQAMQLIQTGRQQIVLAGGSESLHDNMTLMFDAMGALSRRFNDTPQRASRPYDTERDGFVIASGGGVL VLESLEYALARGARIYAELTGFGDCTDSAGMVAPRAAGIARAMRGALHEAGKRPDYVNTHAPSTPLGDTEELRALSEVFG AAFDRRVPAFSSTKGMTGHPLGACGAHEAIYTLLMMRDGFIAGTAGIDTPEPAVDGMPLVRVTREARIDTAMSVSFGFGG SCASLVFEAWQGG
Sequences:
>Translated_413_residues MSMALQRVVVTGMGIVSCLGNTLDEVASALRAGRSRIQRIDAWRERGFASQVAGVASVAHEPPFERKLERFMGDTARFAC HAARNAISDAGLDAAALRSPRAGTVIGSGVGTMSTYDAAMATAHARGVDKVPPYTVPHAMSSTASANVAQVFGLEGVSYS PSSACTTSALAIGQAMQLIQTGRQQIVLAGGSESLHDNMTLMFDAMGALSRRFNDTPQRASRPYDTERDGFVIASGGGVL VLESLEYALARGARIYAELTGFGDCTDSAGMVAPRAAGIARAMRGALHEAGKRPDYVNTHAPSTPLGDTEELRALSEVFG AAFDRRVPAFSSTKGMTGHPLGACGAHEAIYTLLMMRDGFIAGTAGIDTPEPAVDGMPLVRVTREARIDTAMSVSFGFGG SCASLVFEAWQGG >Mature_412_residues SMALQRVVVTGMGIVSCLGNTLDEVASALRAGRSRIQRIDAWRERGFASQVAGVASVAHEPPFERKLERFMGDTARFACH AARNAISDAGLDAAALRSPRAGTVIGSGVGTMSTYDAAMATAHARGVDKVPPYTVPHAMSSTASANVAQVFGLEGVSYSP SSACTTSALAIGQAMQLIQTGRQQIVLAGGSESLHDNMTLMFDAMGALSRRFNDTPQRASRPYDTERDGFVIASGGGVLV LESLEYALARGARIYAELTGFGDCTDSAGMVAPRAAGIARAMRGALHEAGKRPDYVNTHAPSTPLGDTEELRALSEVFGA AFDRRVPAFSSTKGMTGHPLGACGAHEAIYTLLMMRDGFIAGTAGIDTPEPAVDGMPLVRVTREARIDTAMSVSFGFGGS CASLVFEAWQGG
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Specific for elongation from C-10 to unsaturated C-16 and C-18 fatty acids [H]
COG id: COG0304
COG function: function code IQ; 3-oxoacyl-(acyl-carrier-protein) synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the beta-ketoacyl-ACP synthases family [H]
Homologues:
Organism=Homo sapiens, GI8923559, Length=419, Percent_Identity=34.1288782816229, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI41872631, Length=353, Percent_Identity=25.7790368271955, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI223972627, Length=138, Percent_Identity=39.1304347826087, Blast_Score=80, Evalue=5e-15, Organism=Escherichia coli, GI1788663, Length=406, Percent_Identity=47.7832512315271, Blast_Score=345, Evalue=3e-96, Organism=Escherichia coli, GI1787337, Length=427, Percent_Identity=38.1733021077283, Blast_Score=233, Evalue=2e-62, Organism=Caenorhabditis elegans, GI71983541, Length=418, Percent_Identity=31.1004784688995, Blast_Score=157, Evalue=1e-38, Organism=Caenorhabditis elegans, GI71983535, Length=263, Percent_Identity=36.1216730038023, Blast_Score=129, Evalue=2e-30, Organism=Caenorhabditis elegans, GI212642053, Length=357, Percent_Identity=26.6106442577031, Blast_Score=98, Evalue=8e-21, Organism=Caenorhabditis elegans, GI17550940, Length=287, Percent_Identity=26.8292682926829, Blast_Score=79, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6320904, Length=446, Percent_Identity=32.0627802690583, Blast_Score=192, Evalue=6e-50, Organism=Drosophila melanogaster, GI24644341, Length=421, Percent_Identity=36.104513064133, Blast_Score=200, Evalue=1e-51, Organism=Drosophila melanogaster, GI221330659, Length=346, Percent_Identity=27.4566473988439, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI19920632, Length=346, Percent_Identity=27.4566473988439, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI24581345, Length=357, Percent_Identity=24.9299719887955, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: 24024 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 30,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000794 - InterPro: IPR018201 - InterPro: IPR014031 - InterPro: IPR014030 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF00109 ketoacyl-synt; PF02801 Ketoacyl-synt_C [H]
EC number: =2.3.1.41 [H]
Molecular weight: Translated: 43162; Mature: 43031
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00606 B_KETOACYL_SYNTHASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMALQRVVVTGMGIVSCLGNTLDEVASALRAGRSRIQRIDAWRERGFASQVAGVASVAH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC EPPFERKLERFMGDTARFACHAARNAISDAGLDAAALRSPRAGTVIGSGVGTMSTYDAAM CCCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEECCCCCHHHHHHHH ATAHARGVDKVPPYTVPHAMSSTASANVAQVFGLEGVSYSPSSACTTSALAIGQAMQLIQ HHHHHCCCCCCCCCCCCHHHHCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH TGRQQIVLAGGSESLHDNMTLMFDAMGALSRRFNDTPQRASRPYDTERDGFVIASGGGVL CCCCEEEEECCCCCHHCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEECCCCEE VLESLEYALARGARIYAELTGFGDCTDSAGMVAPRAAGIARAMRGALHEAGKRPDYVNTH EHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC APSTPLGDTEELRALSEVFGAAFDRRVPAFSSTKGMTGHPLGACGAHEAIYTLLMMRDGF CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC IAGTAGIDTPEPAVDGMPLVRVTREARIDTAMSVSFGFGGSCASLVFEAWQGG EEECCCCCCCCCCCCCCCHHHHHHHHHHCHHEEEECCCCCHHHHHHHHHHCCC >Mature Secondary Structure SMALQRVVVTGMGIVSCLGNTLDEVASALRAGRSRIQRIDAWRERGFASQVAGVASVAH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC EPPFERKLERFMGDTARFACHAARNAISDAGLDAAALRSPRAGTVIGSGVGTMSTYDAAM CCCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEECCCCCHHHHHHHH ATAHARGVDKVPPYTVPHAMSSTASANVAQVFGLEGVSYSPSSACTTSALAIGQAMQLIQ HHHHHCCCCCCCCCCCCHHHHCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH TGRQQIVLAGGSESLHDNMTLMFDAMGALSRRFNDTPQRASRPYDTERDGFVIASGGGVL CCCCEEEEECCCCCHHCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEECCCCEE VLESLEYALARGARIYAELTGFGDCTDSAGMVAPRAAGIARAMRGALHEAGKRPDYVNTH EHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC APSTPLGDTEELRALSEVFGAAFDRRVPAFSSTKGMTGHPLGACGAHEAIYTLLMMRDGF CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC IAGTAGIDTPEPAVDGMPLVRVTREARIDTAMSVSFGFGGSCASLVFEAWQGG EEECCCCCCCCCCCCCCCHHHHHHHHHHCHHEEEECCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]