| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is cysM [H]
Identifier: 91784803
GI number: 91784803
Start: 3792758
End: 3793660
Strand: Reverse
Name: cysM [H]
Synonym: Bxe_A0990
Alternate gene names: 91784803
Gene position: 3793660-3792758 (Counterclockwise)
Preceding gene: 91784804
Following gene: 91784801
Centisome position: 77.49
GC content: 63.46
Gene sequence:
>903_bases ATGGCTTACAAAACGATTGAAGACACGATCGGCAATACGCCGCTCGTGCAGCTCGTCCGGCTCCCCGACGACGAGATCCG CAGCCGCAACAACGTGATCCTTGCGAAGCTCGAGGGCAACAACCCCGCGGGTTCGGTGAAGGATCGCCCGGCGTTGTCGA TGATCAAGAAAGCGGAAGCGCGCGGGCGCATCAAGCCCGGCGACACGCTGATCGAATCGACCAGCGGCAACACCGGCATC GCGCTGGCTATGGCGGCCGCGATCCGTGGCTACAAGATGGTGCTGATCATGCCGGAAGATCTGTCGGTGGAACGCCGTCA GAGCATGGCCGCATACGGTGCGCAGATCGTGCTCACGCCGGTCACGGGCGGCATGGAGTACGCACGCGATCTGGCCGAGC AGATGCAGCGCGAAGGCAAGGGCATCATCCTCGACCAGTTTGCCAATCCCGACAATCCGGCCGCGCACGTCGAAGGCACG GGGCCGGAAATCTGGCGCGATACCGAAGGGCGCATTACCCACTTCGTGTCGTCGATGGGCACGACCGGCACGATCATGGG CGTGTCCACCTATCTGAAAGAACAGAACCAGGCGATCGAGATCATCGGCGCGCAGCCCGAAGAGGGTTCGCGCATTCCGG GCATCCGCAAATGGCCGGAAGCCTATCTGCCGAAGATTTTCGATCGCAGCCGCGTGGATCGTGTGGAGAACGTGAGCCAG GCCGCCGCCGAGGCTATGGCGCGCCGTATGGCGTCGGTGGAGGGCATCTTTGCCGGCATCTCGTCGGGCGGCGCGTGCGA AGTGGCGCTGCGCGTCGCGCGGCAGGTCGAGAACGCGACCATCGTGTTCATCGTTTGCGATCGCGGCGACCGTTATCTGT CCACGGGTGTGTTTCCCGCTTAA
Upstream 100 bases:
>100_bases CCTGCATCCATGCGCACAGAAGGGCCGCGCGGCAGGTGCGGGCACGGTGGTTTAGAATCGACGGATCAAGACTTCGCGCA CCGACAGCACCCGAACCGAT
Downstream 100 bases:
>100_bases ACGCTCTGCGGCGTTTCTCGTCCGTCAATGAAAAAAGCGCCGATTCGCAACCGGCGCTTTTTTCATGTCCACCCGTGAGG CGGGCTCGTCGCGCCCGCTA
Product: cysteine synthase B
Products: NA
Alternate protein names: CSase B; O-acetylserine (thiol)-lyase B; OAS-TL B; O-acetylserine sulfhydrylase B [H]
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MAYKTIEDTIGNTPLVQLVRLPDDEIRSRNNVILAKLEGNNPAGSVKDRPALSMIKKAEARGRIKPGDTLIESTSGNTGI ALAMAAAIRGYKMVLIMPEDLSVERRQSMAAYGAQIVLTPVTGGMEYARDLAEQMQREGKGIILDQFANPDNPAAHVEGT GPEIWRDTEGRITHFVSSMGTTGTIMGVSTYLKEQNQAIEIIGAQPEEGSRIPGIRKWPEAYLPKIFDRSRVDRVENVSQ AAAEAMARRMASVEGIFAGISSGGACEVALRVARQVENATIVFIVCDRGDRYLSTGVFPA
Sequences:
>Translated_300_residues MAYKTIEDTIGNTPLVQLVRLPDDEIRSRNNVILAKLEGNNPAGSVKDRPALSMIKKAEARGRIKPGDTLIESTSGNTGI ALAMAAAIRGYKMVLIMPEDLSVERRQSMAAYGAQIVLTPVTGGMEYARDLAEQMQREGKGIILDQFANPDNPAAHVEGT GPEIWRDTEGRITHFVSSMGTTGTIMGVSTYLKEQNQAIEIIGAQPEEGSRIPGIRKWPEAYLPKIFDRSRVDRVENVSQ AAAEAMARRMASVEGIFAGISSGGACEVALRVARQVENATIVFIVCDRGDRYLSTGVFPA >Mature_299_residues AYKTIEDTIGNTPLVQLVRLPDDEIRSRNNVILAKLEGNNPAGSVKDRPALSMIKKAEARGRIKPGDTLIESTSGNTGIA LAMAAAIRGYKMVLIMPEDLSVERRQSMAAYGAQIVLTPVTGGMEYARDLAEQMQREGKGIILDQFANPDNPAAHVEGTG PEIWRDTEGRITHFVSSMGTTGTIMGVSTYLKEQNQAIEIIGAQPEEGSRIPGIRKWPEAYLPKIFDRSRVDRVENVSQA AAEAMARRMASVEGIFAGISSGGACEVALRVARQVENATIVFIVCDRGDRYLSTGVFPA
Specific function: Two Cysteine Synthase Enzymes Are Found. Both Catalyze The Same Reaction. Cysteine Synthase B Can Also Use Thiosulfate In Place Of Sulfide To Give Cysteine Thiosulfonate As A Product. [C]
COG id: COG0031
COG function: function code E; Cysteine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cysteine synthase/cystathionine beta- synthase family [H]
Homologues:
Organism=Homo sapiens, GI295821202, Length=302, Percent_Identity=36.7549668874172, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI295821200, Length=302, Percent_Identity=36.7549668874172, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI4557415, Length=302, Percent_Identity=36.7549668874172, Blast_Score=174, Evalue=1e-43, Organism=Escherichia coli, GI2367138, Length=295, Percent_Identity=62.3728813559322, Blast_Score=367, Evalue=1e-103, Organism=Escherichia coli, GI1788754, Length=317, Percent_Identity=43.5331230283912, Blast_Score=202, Evalue=3e-53, Organism=Caenorhabditis elegans, GI17562970, Length=302, Percent_Identity=42.7152317880795, Blast_Score=209, Evalue=1e-54, Organism=Caenorhabditis elegans, GI17535051, Length=305, Percent_Identity=41.3114754098361, Blast_Score=209, Evalue=1e-54, Organism=Caenorhabditis elegans, GI32566674, Length=297, Percent_Identity=43.4343434343434, Blast_Score=207, Evalue=5e-54, Organism=Caenorhabditis elegans, GI115535073, Length=300, Percent_Identity=40.3333333333333, Blast_Score=194, Evalue=5e-50, Organism=Caenorhabditis elegans, GI17561720, Length=302, Percent_Identity=40.3973509933775, Blast_Score=187, Evalue=4e-48, Organism=Caenorhabditis elegans, GI25147552, Length=315, Percent_Identity=33.968253968254, Blast_Score=140, Evalue=6e-34, Organism=Caenorhabditis elegans, GI17534315, Length=317, Percent_Identity=35.6466876971609, Blast_Score=138, Evalue=3e-33, Organism=Caenorhabditis elegans, GI32566672, Length=212, Percent_Identity=37.7358490566038, Blast_Score=135, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6321594, Length=316, Percent_Identity=38.2911392405063, Blast_Score=181, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6321449, Length=333, Percent_Identity=31.8318318318318, Blast_Score=124, Evalue=2e-29, Organism=Drosophila melanogaster, GI24643623, Length=311, Percent_Identity=37.620578778135, Blast_Score=168, Evalue=4e-42, Organism=Drosophila melanogaster, GI20129101, Length=311, Percent_Identity=37.620578778135, Blast_Score=168, Evalue=4e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001216 - InterPro: IPR005856 - InterPro: IPR005858 - InterPro: IPR001926 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =2.5.1.47 [H]
Molecular weight: Translated: 32493; Mature: 32361
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: PS00901 CYS_SYNTHASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYKTIEDTIGNTPLVQLVRLPDDEIRSRNNVILAKLEGNNPAGSVKDRPALSMIKKAEA CCCCCHHHHCCCCCCEEEEECCCHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHH RGRIKPGDTLIESTSGNTGIALAMAAAIRGYKMVLIMPEDLSVERRQSMAAYGAQIVLTP CCCCCCCCCEEECCCCCCHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHCCCEEEEEE VTGGMEYARDLAEQMQREGKGIILDQFANPDNPAAHVEGTGPEIWRDTEGRITHFVSSMG CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEECCCCHHHEECCCCHHHHHHHHCC TTGTIMGVSTYLKEQNQAIEIIGAQPEEGSRIPGIRKWPEAYLPKIFDRSRVDRVENVSQ CCEEHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH AAAEAMARRMASVEGIFAGISSGGACEVALRVARQVENATIVFIVCDRGDRYLSTGVFPA HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCEECCCCCCC >Mature Secondary Structure AYKTIEDTIGNTPLVQLVRLPDDEIRSRNNVILAKLEGNNPAGSVKDRPALSMIKKAEA CCCCHHHHCCCCCCEEEEECCCHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHH RGRIKPGDTLIESTSGNTGIALAMAAAIRGYKMVLIMPEDLSVERRQSMAAYGAQIVLTP CCCCCCCCCEEECCCCCCHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHCCCEEEEEE VTGGMEYARDLAEQMQREGKGIILDQFANPDNPAAHVEGTGPEIWRDTEGRITHFVSSMG CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEECCCCHHHEECCCCHHHHHHHHCC TTGTIMGVSTYLKEQNQAIEIIGAQPEEGSRIPGIRKWPEAYLPKIFDRSRVDRVENVSQ CCEEHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH AAAEAMARRMASVEGIFAGISSGGACEVALRVARQVENATIVFIVCDRGDRYLSTGVFPA HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]