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The map label for this gene is ybaV [C]

Identifier: 91784804

GI number: 91784804

Start: 3793931

End: 3794296

Strand: Reverse

Name: ybaV [C]

Synonym: Bxe_A0989

Alternate gene names: 91784804

Gene position: 3794296-3793931 (Counterclockwise)

Preceding gene: 91784805

Following gene: 91784803

Centisome position: 77.5

GC content: 65.03

Gene sequence:

>366_bases
ATGTTTCGAAAAATTCTGGTTACCGCGGCCATGCTCGCCGCTTTCGGCCACGCTTATGCGGCGGTCGACGTCAACACGGC
TAATGAGGACGCGCTGCGCGGCATCAAGGGCATCGGTCCTGCCAAAGCGAAAGCCATTCTCGACGAGCGTGCGGCGCATG
GTCCGTTCAAGGACCCGGCCGATCTCGGCAAGCGCGTCAAGGGCATGGGCGGGCATACCGTCGAGCGCCTGCAGGCGGAG
GGTCTCGCTGTCGGTCCGGCTGGCGCGGCTGCTAACGCGCAGGCTGCGGCGTCTGCACAGACCAAAGGCGCGGCCGTTCC
GGCCAACGCGCCGAAGAACAGTGCAACGGTGGCGGTGAAGAAATAG

Upstream 100 bases:

>100_bases
GTTGGCTGTTCGGCCAGGTGTAAATAATTCGGATCCCTCTTTAAACTGGAATCTCCCGGTTGGTGATGGTCGCCAACCGG
TTGTACGAGGGAGATTCCAT

Downstream 100 bases:

>100_bases
CCTGACACGGAGCGGGCGCGTGGGCCGGATAGTCGCGCGCCCGCTCCGCCGTGCAGTTTTCCTTCATGGTCGGAGTCGTC
ACGAACACTCCTTCAGCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: ComEA-Related Signal Peptide Protein; Helix-Hairpin-Helix Motif Protein; DNA Transport Competence Protein; DNA Uptake Protein ComEA-Like; Competence Protein ComEA Helix-Hairpin-Helix Repeat Protein; Helix-Turn-Helix Protein; DNA Uptake Protein; ComE Protein; Competence Protein ComEA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MFRKILVTAAMLAAFGHAYAAVDVNTANEDALRGIKGIGPAKAKAILDERAAHGPFKDPADLGKRVKGMGGHTVERLQAE
GLAVGPAGAAANAQAAASAQTKGAAVPANAPKNSATVAVKK

Sequences:

>Translated_121_residues
MFRKILVTAAMLAAFGHAYAAVDVNTANEDALRGIKGIGPAKAKAILDERAAHGPFKDPADLGKRVKGMGGHTVERLQAE
GLAVGPAGAAANAQAAASAQTKGAAVPANAPKNSATVAVKK
>Mature_121_residues
MFRKILVTAAMLAAFGHAYAAVDVNTANEDALRGIKGIGPAKAKAILDERAAHGPFKDPADLGKRVKGMGGHTVERLQAE
GLAVGPAGAAANAQAAASAQTKGAAVPANAPKNSATVAVKK

Specific function: Unknown

COG id: COG1555

COG function: function code L; DNA uptake protein and related DNA-binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12081; Mature: 12081

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRKILVTAAMLAAFGHAYAAVDVNTANEDALRGIKGIGPAKAKAILDERAAHGPFKDPA
CHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHH
DLGKRVKGMGGHTVERLQAEGLAVGPAGAAANAQAAASAQTKGAAVPANAPKNSATVAVK
HHHHHHCCCCCHHHHHHHHCCEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEE
K
C
>Mature Secondary Structure
MFRKILVTAAMLAAFGHAYAAVDVNTANEDALRGIKGIGPAKAKAILDERAAHGPFKDPA
CHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHH
DLGKRVKGMGGHTVERLQAEGLAVGPAGAAANAQAAASAQTKGAAVPANAPKNSATVAVK
HHHHHHCCCCCHHHHHHHHCCEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEE
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA