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The map label for this gene is fadE25 [H]

Identifier: 91784793

GI number: 91784793

Start: 3781882

End: 3783672

Strand: Reverse

Name: fadE25 [H]

Synonym: Bxe_A1000

Alternate gene names: 91784793

Gene position: 3783672-3781882 (Counterclockwise)

Preceding gene: 91784794

Following gene: 91784791

Centisome position: 77.28

GC content: 63.48

Gene sequence:

>1791_bases
ATGAGCTATACGGCACCCATCAAGGACATGCTGTTCGTGATGAAAGAACTGGCCGGTCTCGAACACATCGCGACGCTGCC
GGGCTTCGAAGATGCGAACCTCGACACCGCGCAGGCCGTGCTCGAAGAGTCGGCGAAACTGTGCAGCGAAGTGCTGGCGC
CGCTGAATGTCGAAGGCGATCGCAATCCGAGTAGCTGGAAAGACGGCGTGGTCACCGCAACGCCTGGCTTCAGGGAAGCG
TTTCGCCAGTTCGGCGAAGGCGGCTGGCAAGGCGTGCAGCATCCGGTCCACTACGAAGGCCAGGGTCTGCCCAAGCTGAT
TGCCACAGCCTGTATCGAGATGCTCAACGCGTCGAACCTGTCGTTCGCGCTGTGCCCGCTGCTCACCGACGGCGCGATCG
AGGCGCTCCTCACCGCTGGCAGCGAGGAGCAGAAGCAGACCTATGTGCCCAGGCTGATTTCCGGCGAATGGACCGGCACG
ATGAACCTGACCGAGCCGCAGGCCGGCTCCGATCTCGCGCTGGTGCGCACGCGCGCCGAGCCGCAGGGCGACGGCTCGTT
CAAACTGTTCGGCACGAAAATTTTCATCACGTGGGGCGAGCACGACATGGCGAAGAACATCGCCCATCTCGTGCTGGCGC
GCACGCCGAACGCACCCGAAGGCGTGAAGGGCATTTCGCTGTTCATCGTGCCGAAGTTTCTCGTCAACGAAGACGGTTCG
CTCGGCGAGCGCAACGACGTGCACTGCGTGTCGATCGAACACAAGCTCGGCATCAAGGCGAGCCCGACCGCGGTGCTGCA
GTTCGGCGACCACGGCGGCGCGACCGGTCATCTGATCGGCGAAGAGAATCGCGGTCTCGAGTACATGTTCATCATGATGA
ACGCGGCGCGGTTTGCGGTGGGCATGCAAGGCATCGGCGTGTCGGATCGTGCGTACCAGAAGGCGGTGGCATACGCGAAA
GACCGCGTGCAAAGCCGTCCCGTGGATGGCTCCGCGAAACAGCCGGTCGCGATCATTCAGCACCCCGATGTGCGCCGTAT
GCTCGCGACCATGCGTGGTCTCACCGAAGCATCGCGCGCGCTCGCTTATGTGGCCGCGGCTCATTGCGATATCGCGCACC
GTCACGCGGACGAAGCCACGCGCGCCCAACACCAGGCGATCTATGAATACCTCGTGCCGATCGTGAAGGGCTGGAGCACG
GAACTGTCGATCGATGTGACGAGCCTCGGCGTGCAGGTGCATGGCGGCATGGGCTTCATCGAGGAAACGGGCGCCGCGCA
GTACTACCGCGACGCGCGCATTCTGCCTATCTACGAAGGCACGACCGCAATTCAGGCCAACGACCTGATCGGCCGCAAGA
CGGTGCGCGACGGCGGCAAGGTGGCGAAGTCGCTGCTCGCCGGGGTGGCTGAAACGGTTGAAGCGCTCGGCGCGCAGCAA
GGTCCGGCGTTCGCGTCGATGAAGAAGTATCTCGCACAGGGTCATCGCTCGTTGAGCGCGGTGGTCGAGTTCGTGGTTGC
GAATACGAAGAGCGATCCGAATGCGGTGTTCGCCGGCAGCGTGCCGTATCTGAAGCTTGCCGGCATCGTGCTCGGCGGCT
GGCAGATGGCGCGTGCGCTGCTCGTGGCGGCAGAGAAGCGTGACGAAGACCCTTCGTTCTACGGCGCCAAGATCGCGACC
GCGCAGTTCTATGCCGAGCATGTGCTGCCGCTGGCGTCGGCGCTCGAAGCGTCGATTGTCAGTGCGAAGGGTGGCGAGAG
CGTGCTGGCGCTGTCTGAAGATCAGTTCTGA

Upstream 100 bases:

>100_bases
GCCGTAACGCCTTAAAAAAGGCGTCTTGCAGTACAGGAAGGGCGCGGGACCGATCAAGTCCAGCGTCCTTTTTTTATATC
AACGGCGGGAGGAGACGGAA

Downstream 100 bases:

>100_bases
CGCTGCTTCTAATTCCGCTTGAAAAAGCAAACGGCGTCTCGCAAGGCGTCGTTTGTTTTCACCGCACTGGTCTGCGAGAC
ATCACACCAGTTCAGCCGCT

Product: putative acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 596; Mature: 595

Protein sequence:

>596_residues
MSYTAPIKDMLFVMKELAGLEHIATLPGFEDANLDTAQAVLEESAKLCSEVLAPLNVEGDRNPSSWKDGVVTATPGFREA
FRQFGEGGWQGVQHPVHYEGQGLPKLIATACIEMLNASNLSFALCPLLTDGAIEALLTAGSEEQKQTYVPRLISGEWTGT
MNLTEPQAGSDLALVRTRAEPQGDGSFKLFGTKIFITWGEHDMAKNIAHLVLARTPNAPEGVKGISLFIVPKFLVNEDGS
LGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGATGHLIGEENRGLEYMFIMMNAARFAVGMQGIGVSDRAYQKAVAYAK
DRVQSRPVDGSAKQPVAIIQHPDVRRMLATMRGLTEASRALAYVAAAHCDIAHRHADEATRAQHQAIYEYLVPIVKGWST
ELSIDVTSLGVQVHGGMGFIEETGAAQYYRDARILPIYEGTTAIQANDLIGRKTVRDGGKVAKSLLAGVAETVEALGAQQ
GPAFASMKKYLAQGHRSLSAVVEFVVANTKSDPNAVFAGSVPYLKLAGIVLGGWQMARALLVAAEKRDEDPSFYGAKIAT
AQFYAEHVLPLASALEASIVSAKGGESVLALSEDQF

Sequences:

>Translated_596_residues
MSYTAPIKDMLFVMKELAGLEHIATLPGFEDANLDTAQAVLEESAKLCSEVLAPLNVEGDRNPSSWKDGVVTATPGFREA
FRQFGEGGWQGVQHPVHYEGQGLPKLIATACIEMLNASNLSFALCPLLTDGAIEALLTAGSEEQKQTYVPRLISGEWTGT
MNLTEPQAGSDLALVRTRAEPQGDGSFKLFGTKIFITWGEHDMAKNIAHLVLARTPNAPEGVKGISLFIVPKFLVNEDGS
LGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGATGHLIGEENRGLEYMFIMMNAARFAVGMQGIGVSDRAYQKAVAYAK
DRVQSRPVDGSAKQPVAIIQHPDVRRMLATMRGLTEASRALAYVAAAHCDIAHRHADEATRAQHQAIYEYLVPIVKGWST
ELSIDVTSLGVQVHGGMGFIEETGAAQYYRDARILPIYEGTTAIQANDLIGRKTVRDGGKVAKSLLAGVAETVEALGAQQ
GPAFASMKKYLAQGHRSLSAVVEFVVANTKSDPNAVFAGSVPYLKLAGIVLGGWQMARALLVAAEKRDEDPSFYGAKIAT
AQFYAEHVLPLASALEASIVSAKGGESVLALSEDQF
>Mature_595_residues
SYTAPIKDMLFVMKELAGLEHIATLPGFEDANLDTAQAVLEESAKLCSEVLAPLNVEGDRNPSSWKDGVVTATPGFREAF
RQFGEGGWQGVQHPVHYEGQGLPKLIATACIEMLNASNLSFALCPLLTDGAIEALLTAGSEEQKQTYVPRLISGEWTGTM
NLTEPQAGSDLALVRTRAEPQGDGSFKLFGTKIFITWGEHDMAKNIAHLVLARTPNAPEGVKGISLFIVPKFLVNEDGSL
GERNDVHCVSIEHKLGIKASPTAVLQFGDHGGATGHLIGEENRGLEYMFIMMNAARFAVGMQGIGVSDRAYQKAVAYAKD
RVQSRPVDGSAKQPVAIIQHPDVRRMLATMRGLTEASRALAYVAAAHCDIAHRHADEATRAQHQAIYEYLVPIVKGWSTE
LSIDVTSLGVQVHGGMGFIEETGAAQYYRDARILPIYEGTTAIQANDLIGRKTVRDGGKVAKSLLAGVAETVEALGAQQG
PAFASMKKYLAQGHRSLSAVVEFVVANTKSDPNAVFAGSVPYLKLAGIVLGGWQMARALLVAAEKRDEDPSFYGAKIATA
QFYAEHVLPLASALEASIVSAKGGESVLALSEDQF

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=432, Percent_Identity=28.2407407407407, Blast_Score=129, Evalue=1e-29,
Organism=Homo sapiens, GI4501857, Length=382, Percent_Identity=29.8429319371728, Blast_Score=123, Evalue=5e-28,
Organism=Homo sapiens, GI4557233, Length=310, Percent_Identity=32.9032258064516, Blast_Score=122, Evalue=8e-28,
Organism=Homo sapiens, GI226958412, Length=417, Percent_Identity=28.2973621103118, Blast_Score=117, Evalue=3e-26,
Organism=Homo sapiens, GI226958414, Length=384, Percent_Identity=27.8645833333333, Blast_Score=111, Evalue=2e-24,
Organism=Homo sapiens, GI4557235, Length=386, Percent_Identity=28.7564766839378, Blast_Score=109, Evalue=6e-24,
Organism=Homo sapiens, GI76496475, Length=390, Percent_Identity=29.2307692307692, Blast_Score=109, Evalue=8e-24,
Organism=Homo sapiens, GI21361497, Length=378, Percent_Identity=25.6613756613757, Blast_Score=96, Evalue=9e-20,
Organism=Homo sapiens, GI7656849, Length=387, Percent_Identity=27.1317829457364, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI4557231, Length=313, Percent_Identity=26.517571884984, Blast_Score=89, Evalue=8e-18,
Organism=Homo sapiens, GI187960098, Length=313, Percent_Identity=26.517571884984, Blast_Score=89, Evalue=9e-18,
Organism=Escherichia coli, GI87082384, Length=358, Percent_Identity=28.2122905027933, Blast_Score=108, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17508101, Length=408, Percent_Identity=29.1666666666667, Blast_Score=132, Evalue=5e-31,
Organism=Caenorhabditis elegans, GI17506239, Length=368, Percent_Identity=30.1630434782609, Blast_Score=125, Evalue=8e-29,
Organism=Caenorhabditis elegans, GI71985184, Length=382, Percent_Identity=30.1047120418848, Blast_Score=117, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI86563381, Length=335, Percent_Identity=28.6567164179104, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI86563383, Length=335, Percent_Identity=28.6567164179104, Blast_Score=110, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17569725, Length=370, Percent_Identity=28.6486486486486, Blast_Score=105, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI17534899, Length=439, Percent_Identity=27.5626423690205, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17533517, Length=370, Percent_Identity=26.7567567567568, Blast_Score=102, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI17505929, Length=415, Percent_Identity=27.4698795180723, Blast_Score=100, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17538396, Length=379, Percent_Identity=26.6490765171504, Blast_Score=100, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17551932, Length=440, Percent_Identity=25.9090909090909, Blast_Score=93, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17570075, Length=371, Percent_Identity=25.6064690026954, Blast_Score=92, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI71990804, Length=282, Percent_Identity=28.0141843971631, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI32563615, Length=236, Percent_Identity=30.5084745762712, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI71985192, Length=302, Percent_Identity=29.4701986754967, Blast_Score=86, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI71982178, Length=242, Percent_Identity=27.2727272727273, Blast_Score=73, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17534353, Length=325, Percent_Identity=27.0769230769231, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI21356377, Length=366, Percent_Identity=31.4207650273224, Blast_Score=126, Evalue=4e-29,
Organism=Drosophila melanogaster, GI281363737, Length=371, Percent_Identity=27.2237196765499, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI21355753, Length=429, Percent_Identity=27.972027972028, Blast_Score=106, Evalue=6e-23,
Organism=Drosophila melanogaster, GI24666513, Length=422, Percent_Identity=26.7772511848341, Blast_Score=105, Evalue=6e-23,
Organism=Drosophila melanogaster, GI24646207, Length=396, Percent_Identity=27.5252525252525, Blast_Score=100, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24660351, Length=356, Percent_Identity=28.6516853932584, Blast_Score=100, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 63871; Mature: 63740

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYTAPIKDMLFVMKELAGLEHIATLPGFEDANLDTAQAVLEESAKLCSEVLAPLNVEGD
CCCCCCHHHHHHHHHHHHCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
RNPSSWKDGVVTATPGFREAFRQFGEGGWQGVQHPVHYEGQGLPKLIATACIEMLNASNL
CCCCCCCCCEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
SFALCPLLTDGAIEALLTAGSEEQKQTYVPRLISGEWTGTMNLTEPQAGSDLALVRTRAE
CEEEHHHHHHHHHHHHHHCCCHHHHHHHCCHHCCCCCCCEEECCCCCCCCCEEEEEECCC
PQGDGSFKLFGTKIFITWGEHDMAKNIAHLVLARTPNAPEGVKGISLFIVPKFLVNEDGS
CCCCCCEEEEEEEEEEEECCHHHHHHHHHHHEECCCCCCCCCCCEEEEEEEHHHCCCCCC
LGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGATGHLIGEENRGLEYMFIMMNAARFAV
CCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCEEEEEEEHHHHHHH
GMQGIGVSDRAYQKAVAYAKDRVQSRPVDGSAKQPVAIIQHPDVRRMLATMRGLTEASRA
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHH
LAYVAAAHCDIAHRHADEATRAQHQAIYEYLVPIVKGWSTELSIDVTSLGVQVHGGMGFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECCCCCH
EETGAAQYYRDARILPIYEGTTAIQANDLIGRKTVRDGGKVAKSLLAGVAETVEALGAQQ
HHCCCHHHHCCCEEEEEECCCCEEEECCCCCHHHHHCHHHHHHHHHHHHHHHHHHHCCCC
GPAFASMKKYLAQGHRSLSAVVEFVVANTKSDPNAVFAGSVPYLKLAGIVLGGWQMARAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHH
LVAAEKRDEDPSFYGAKIATAQFYAEHVLPLASALEASIVSAKGGESVLALSEDQF
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
>Mature Secondary Structure 
SYTAPIKDMLFVMKELAGLEHIATLPGFEDANLDTAQAVLEESAKLCSEVLAPLNVEGD
CCCCCHHHHHHHHHHHHCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
RNPSSWKDGVVTATPGFREAFRQFGEGGWQGVQHPVHYEGQGLPKLIATACIEMLNASNL
CCCCCCCCCEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
SFALCPLLTDGAIEALLTAGSEEQKQTYVPRLISGEWTGTMNLTEPQAGSDLALVRTRAE
CEEEHHHHHHHHHHHHHHCCCHHHHHHHCCHHCCCCCCCEEECCCCCCCCCEEEEEECCC
PQGDGSFKLFGTKIFITWGEHDMAKNIAHLVLARTPNAPEGVKGISLFIVPKFLVNEDGS
CCCCCCEEEEEEEEEEEECCHHHHHHHHHHHEECCCCCCCCCCCEEEEEEEHHHCCCCCC
LGERNDVHCVSIEHKLGIKASPTAVLQFGDHGGATGHLIGEENRGLEYMFIMMNAARFAV
CCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCEEEEEEEHHHHHHH
GMQGIGVSDRAYQKAVAYAKDRVQSRPVDGSAKQPVAIIQHPDVRRMLATMRGLTEASRA
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHH
LAYVAAAHCDIAHRHADEATRAQHQAIYEYLVPIVKGWSTELSIDVTSLGVQVHGGMGFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECCCCCH
EETGAAQYYRDARILPIYEGTTAIQANDLIGRKTVRDGGKVAKSLLAGVAETVEALGAQQ
HHCCCHHHHCCCEEEEEECCCCEEEECCCCCHHHHHCHHHHHHHHHHHHHHHHHHHCCCC
GPAFASMKKYLAQGHRSLSAVVEFVVANTKSDPNAVFAGSVPYLKLAGIVLGGWQMARAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHH
LVAAEKRDEDPSFYGAKIATAQFYAEHVLPLASALEASIVSAKGGESVLALSEDQF
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]