| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is etfA [H]
Identifier: 91784794
GI number: 91784794
Start: 3783775
End: 3784722
Strand: Reverse
Name: etfA [H]
Synonym: Bxe_A0999
Alternate gene names: 91784794
Gene position: 3784722-3783775 (Counterclockwise)
Preceding gene: 91784795
Following gene: 91784793
Centisome position: 77.3
GC content: 61.29
Gene sequence:
>948_bases ATGACGAATCTGGTAATAGCAGAACACGACAACACGTCGATCAAGGCCGCGACGCTGAACACGATCGCAGCGGCACAGAA GATTGGTGGTGATATTCACGTGCTGGTGGCCGGTCATAACGCACAAGCTGCTGCGGATGCGGCAGCGAAGATTGCAGGCG TGACCAAAGTGCTGCTGGCCGACGCACCGCAACTCGAAGCGGGCCTGGCAGAAAACGTCGAAGCGACGGTGCTGACGATT GTGAAAGACCCGGCGAAGAACTACACGCACATCCTCGCGCCAGCGACGGCATACGGCAAGAACATCGCACCGCGCATCGC CGCAAAGCTCGATGTTGCGCAGATCAGCGACATCACGGCAGTGGATAGCGCCGATACGTTCGAGCGCCCGATCTACGCCG GCAACGCAATCGCGACAGTGCAATCGGCTGACCCGATCAAGGTCATCACGGTGCGCTCGACCGGTTTCGACGCAGTCGCG GCCGAAGGCGGCAGCGCCTCGGTGGAGAAGATCGAAGCGGCAGCGGACAGCGGTATCTCGCAGTTCGTCAGCCGTGAAGT GACGAAGCTGGACCGTCCGGAACTGACGTCGGCGAAGATCATCGTCTCGGGTGGCCGGGGTCTGGGCAACGGCGAGAACT ACACCAAGGTGCTCGAACCGCTGGCCGACAAGCTGAACGCAGCGCTGGGCGCATCGCGTGCCGCAGTCGATGCGGGCTTC GTGCCGAACGACTATCAGGTCGGCCAAACCGGCAAGATCGTCGCGCCGCAACTGTATGTGGCGGTCGGCATCTCCGGCGC GATCCAGCATCTGGCTGGTATGAAAGACAGCAAAGTGATCGTCGCGATCAACAAGGACCCGGAAGCGCCGATTTTCAGCG TCGCCGATTACGGTCTGGTGGGCGATCTGTTCACGGTCGTGCCCGAACTCGTTAGCGAGCTCGGTTAA
Upstream 100 bases:
>100_bases AAGCGCTCCGCCGGTGTGAAGGTGCCGGATGTGAAGACACTGGTCGAGAAGCTGAAGACCGAAGCCAAGGTGCTTTAAGT AGAACGCGGAGACAGAGCAA
Downstream 100 bases:
>100_bases GCGCCGTAACGCCTTAAAAAAGGCGTCTTGCAGTACAGGAAGGGCGCGGGACCGATCAAGTCCAGCGTCCTTTTTTTATA TCAACGGCGGGAGGAGACGG
Product: electron transfer flavoprotein subunit alpha
Products: NA
Alternate protein names: Alpha-ETF; Electron transfer flavoprotein large subunit; ETFLS [H]
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MTNLVIAEHDNTSIKAATLNTIAAAQKIGGDIHVLVAGHNAQAAADAAAKIAGVTKVLLADAPQLEAGLAENVEATVLTI VKDPAKNYTHILAPATAYGKNIAPRIAAKLDVAQISDITAVDSADTFERPIYAGNAIATVQSADPIKVITVRSTGFDAVA AEGGSASVEKIEAAADSGISQFVSREVTKLDRPELTSAKIIVSGGRGLGNGENYTKVLEPLADKLNAALGASRAAVDAGF VPNDYQVGQTGKIVAPQLYVAVGISGAIQHLAGMKDSKVIVAINKDPEAPIFSVADYGLVGDLFTVVPELVSELG
Sequences:
>Translated_315_residues MTNLVIAEHDNTSIKAATLNTIAAAQKIGGDIHVLVAGHNAQAAADAAAKIAGVTKVLLADAPQLEAGLAENVEATVLTI VKDPAKNYTHILAPATAYGKNIAPRIAAKLDVAQISDITAVDSADTFERPIYAGNAIATVQSADPIKVITVRSTGFDAVA AEGGSASVEKIEAAADSGISQFVSREVTKLDRPELTSAKIIVSGGRGLGNGENYTKVLEPLADKLNAALGASRAAVDAGF VPNDYQVGQTGKIVAPQLYVAVGISGAIQHLAGMKDSKVIVAINKDPEAPIFSVADYGLVGDLFTVVPELVSELG >Mature_314_residues TNLVIAEHDNTSIKAATLNTIAAAQKIGGDIHVLVAGHNAQAAADAAAKIAGVTKVLLADAPQLEAGLAENVEATVLTIV KDPAKNYTHILAPATAYGKNIAPRIAAKLDVAQISDITAVDSADTFERPIYAGNAIATVQSADPIKVITVRSTGFDAVAA EGGSASVEKIEAAADSGISQFVSREVTKLDRPELTSAKIIVSGGRGLGNGENYTKVLEPLADKLNAALGASRAAVDAGFV PNDYQVGQTGKIVAPQLYVAVGISGAIQHLAGMKDSKVIVAINKDPEAPIFSVADYGLVGDLFTVVPELVSELG
Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]
COG id: COG2025
COG function: function code C; Electron transfer flavoprotein, alpha subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ETF alpha-subunit/fixB family [H]
Homologues:
Organism=Homo sapiens, GI4503607, Length=313, Percent_Identity=60.702875399361, Blast_Score=365, Evalue=1e-101, Organism=Homo sapiens, GI189181759, Length=277, Percent_Identity=61.7328519855596, Blast_Score=327, Evalue=7e-90, Organism=Escherichia coli, GI1787990, Length=249, Percent_Identity=34.9397590361446, Blast_Score=128, Evalue=4e-31, Organism=Escherichia coli, GI1786226, Length=229, Percent_Identity=34.4978165938865, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI87082157, Length=229, Percent_Identity=31.8777292576419, Blast_Score=95, Evalue=7e-21, Organism=Caenorhabditis elegans, GI17506929, Length=314, Percent_Identity=56.0509554140127, Blast_Score=335, Evalue=2e-92, Organism=Saccharomyces cerevisiae, GI6325261, Length=296, Percent_Identity=43.5810810810811, Blast_Score=252, Evalue=7e-68, Organism=Drosophila melanogaster, GI17136898, Length=314, Percent_Identity=61.7834394904459, Blast_Score=363, Evalue=1e-101, Organism=Drosophila melanogaster, GI24652801, Length=314, Percent_Identity=61.7834394904459, Blast_Score=363, Evalue=1e-101,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001308 - InterPro: IPR014730 - InterPro: IPR014731 - InterPro: IPR018206 - InterPro: IPR014729 [H]
Pfam domain/function: PF01012 ETF; PF00766 ETF_alpha [H]
EC number: NA
Molecular weight: Translated: 32240; Mature: 32109
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00696 ETF_ALPHA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNLVIAEHDNTSIKAATLNTIAAAQKIGGDIHVLVAGHNAQAAADAAAKIAGVTKVLLA CCCEEEEECCCCEEEEEHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHC DAPQLEAGLAENVEATVLTIVKDPAKNYTHILAPATAYGKNIAPRIAAKLDVAQISDITA CCCCHHHCHHCCCCEEEEEEEECCCCCCEEEEECHHHHCCCCCHHHHHHCCHHHHCCEEE VDSADTFERPIYAGNAIATVQSADPIKVITVRSTGFDAVAAEGGSASVEKIEAAADSGIS CCCCCHHCCCEECCCEEEEEECCCCEEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHH QFVSREVTKLDRPELTSAKIIVSGGRGLGNGENYTKVLEPLADKLNAALGASRAAVDAGF HHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCC VPNDYQVGQTGKIVAPQLYVAVGISGAIQHLAGMKDSKVIVAINKDPEAPIFSVADYGLV CCCCCEECCCCCEECCEEEEEECHHHHHHHHHCCCCCEEEEEECCCCCCCEEEHHCCCHH GDLFTVVPELVSELG HHHHHHHHHHHHHCC >Mature Secondary Structure TNLVIAEHDNTSIKAATLNTIAAAQKIGGDIHVLVAGHNAQAAADAAAKIAGVTKVLLA CCEEEEECCCCEEEEEHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHC DAPQLEAGLAENVEATVLTIVKDPAKNYTHILAPATAYGKNIAPRIAAKLDVAQISDITA CCCCHHHCHHCCCCEEEEEEEECCCCCCEEEEECHHHHCCCCCHHHHHHCCHHHHCCEEE VDSADTFERPIYAGNAIATVQSADPIKVITVRSTGFDAVAAEGGSASVEKIEAAADSGIS CCCCCHHCCCEECCCEEEEEECCCCEEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHH QFVSREVTKLDRPELTSAKIIVSGGRGLGNGENYTKVLEPLADKLNAALGASRAAVDAGF HHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCC VPNDYQVGQTGKIVAPQLYVAVGISGAIQHLAGMKDSKVIVAINKDPEAPIFSVADYGLV CCCCCEECCCCCEECCEEEEEECHHHHHHHHHCCCCCEEEEEECCCCCCCEEEHHCCCHH GDLFTVVPELVSELG HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]