| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is ppx [H]
Identifier: 91784525
GI number: 91784525
Start: 3510809
End: 3512338
Strand: Reverse
Name: ppx [H]
Synonym: Bxe_A1274
Alternate gene names: 91784525
Gene position: 3512338-3510809 (Counterclockwise)
Preceding gene: 91784527
Following gene: 91784522
Centisome position: 71.74
GC content: 64.64
Gene sequence:
>1530_bases ATGGAGTCCGCTTACTCGATGGTCACTACGCCACAACTCCTCGCTGCCGTCGATCTCGGCTCGAACAGCTTCCGGCTGAT CGTCGGCCGGGTCGAGGAAACCGACGCGGGCAGCCAGATTTATCAGGTCGACGCGTTGCGCGAACCGGTCCGTCTTGCCG CCGGCCTGTCGCGCGACAAGATGCTCGACCGCGCTTCGCAGGTGCGCGGCTGGGACGCCCTCAAGCGCTTTGGCGAGCGT CTGCGCGACTTTCATCCCGATCACGTCCGCGCGGTCGCCACCAATACGCTGCGCATCGCCAAGAACGCCGGCGAATTTCT CGGCGAGGCGCAAGCCGCGCTCGGCTTCCCGATCGAAGTGATCGCCGGGCGCGAAGAAGCGCGCCTGATCTACGCAGGCG CCGCACACTCCGTGCCCGCGAGTCCCGGCAAACGCCTCGTGGTCGATATCGGCGGCGGCTCGACGGAATTCATCATCGGC TCGCACTACACGCCGATCAAGATGGAGAGTCTGTATATCGGTTGCGTGAGCCATAGCCGTGCATTTTTCCCGGCCGGCAA TGTCGACGAATACACCATGCGCCAGGCCGAGCTCGCCGCCGGGCGCGAAATCCAGATCATTTCCGCCGAGTACAAGAAAA CCGGCTGGGAGCAGGCGATCGGCTCGTCGGGCACGGCGCGCGCGCTCGCTGAACTGGTCGAGGCGAACGGCTTCAACGAC GCGGGCGTCACGCACGGCATTTCGCGCGGCGGCCTCGAACGGCTCAAGCGCGCGCTGATCAAGGCGGAGAACGTCAATCG GCTGAAGCTCGTCGCGCTGAAGGGCGATCGCATTCCGGTGCTGGCCGGCGGCCTGTCGATCATGATTGCGGTGTTCGACG AACTGGGCGTCGAATACGTCGACACCACGGACGGCGCGTTGCGTCTGGGCGTGCTGTACGACCTGCTGGGCCGCTCGCAA CACGAAGACATGCGCACGGTGACGGTGGAGGGCTTCATGCGCCGCTACGGCGTGGATCGCGCGCAGGCGGGGCGTATCGG CGAACTCGCGGTGCGCTTTTACGACCAGTTCGAGGAACCCGACGAAGAACGCCGGGCGGAGAACCGCATGTTTCTCGGTT GGGCGGCGGCGCTGCACGAAATCGGTCTGTCCATCTCGCACAGCGCGTATCACAAGCATTCGGCCTACATTGCCAGCAAC GCGGATATGCCAGGCTTTTCGCGCACCGACCAGGCGCGGCTCGCCGCGCTCGTGCTCGGCCACGCGGGCAAACTCGGCAA GCTCTCGCAAACGCGCGAAGTGGAGTGGCCGCTGCTGTTCTGTCTACGACTCGCGGCGCTGCTGTGCCGTCGGCGTGCGG ATGTCGGCTTGCCGGGCATTTCGGTGGCGCAGGTCAACAATGGTTATGAGGCGCGTTTGCCGAACGAGTGGGTGAGCAAC AATCCGCTCACCGACTACAGCCTGATTCAGGAAGCCGCGGAGTGGGAGAAGGTCGGCATTCCGTATCGTGTGGTTTATAC GGACGATTGA
Upstream 100 bases:
>100_bases TAGAATGGCGTCTTTGAACAGCGCGGCCGGCCAGAAGGCGCCCAAGGCGTCGAATGGACATCCGGCTCCCAACGCATCCA CCGCCGCCGCGCTTGCGCGC
Downstream 100 bases:
>100_bases AGCGGGTTGAAGCCGGTTGAAGCCTTCTGCGAGGCGCATGAATGAAAAAGCCCGGCATGCACACGCCGGGCTTTTTTTGC GGCCGTTTTTTCGCAGCCAT
Product: Ppx/GppA phosphatase
Products: NA
Alternate protein names: ExopolyPase; Metaphosphatase [H]
Number of amino acids: Translated: 509; Mature: 509
Protein sequence:
>509_residues MESAYSMVTTPQLLAAVDLGSNSFRLIVGRVEETDAGSQIYQVDALREPVRLAAGLSRDKMLDRASQVRGWDALKRFGER LRDFHPDHVRAVATNTLRIAKNAGEFLGEAQAALGFPIEVIAGREEARLIYAGAAHSVPASPGKRLVVDIGGGSTEFIIG SHYTPIKMESLYIGCVSHSRAFFPAGNVDEYTMRQAELAAGREIQIISAEYKKTGWEQAIGSSGTARALAELVEANGFND AGVTHGISRGGLERLKRALIKAENVNRLKLVALKGDRIPVLAGGLSIMIAVFDELGVEYVDTTDGALRLGVLYDLLGRSQ HEDMRTVTVEGFMRRYGVDRAQAGRIGELAVRFYDQFEEPDEERRAENRMFLGWAAALHEIGLSISHSAYHKHSAYIASN ADMPGFSRTDQARLAALVLGHAGKLGKLSQTREVEWPLLFCLRLAALLCRRRADVGLPGISVAQVNNGYEARLPNEWVSN NPLTDYSLIQEAAEWEKVGIPYRVVYTDD
Sequences:
>Translated_509_residues MESAYSMVTTPQLLAAVDLGSNSFRLIVGRVEETDAGSQIYQVDALREPVRLAAGLSRDKMLDRASQVRGWDALKRFGER LRDFHPDHVRAVATNTLRIAKNAGEFLGEAQAALGFPIEVIAGREEARLIYAGAAHSVPASPGKRLVVDIGGGSTEFIIG SHYTPIKMESLYIGCVSHSRAFFPAGNVDEYTMRQAELAAGREIQIISAEYKKTGWEQAIGSSGTARALAELVEANGFND AGVTHGISRGGLERLKRALIKAENVNRLKLVALKGDRIPVLAGGLSIMIAVFDELGVEYVDTTDGALRLGVLYDLLGRSQ HEDMRTVTVEGFMRRYGVDRAQAGRIGELAVRFYDQFEEPDEERRAENRMFLGWAAALHEIGLSISHSAYHKHSAYIASN ADMPGFSRTDQARLAALVLGHAGKLGKLSQTREVEWPLLFCLRLAALLCRRRADVGLPGISVAQVNNGYEARLPNEWVSN NPLTDYSLIQEAAEWEKVGIPYRVVYTDD >Mature_509_residues MESAYSMVTTPQLLAAVDLGSNSFRLIVGRVEETDAGSQIYQVDALREPVRLAAGLSRDKMLDRASQVRGWDALKRFGER LRDFHPDHVRAVATNTLRIAKNAGEFLGEAQAALGFPIEVIAGREEARLIYAGAAHSVPASPGKRLVVDIGGGSTEFIIG SHYTPIKMESLYIGCVSHSRAFFPAGNVDEYTMRQAELAAGREIQIISAEYKKTGWEQAIGSSGTARALAELVEANGFND AGVTHGISRGGLERLKRALIKAENVNRLKLVALKGDRIPVLAGGLSIMIAVFDELGVEYVDTTDGALRLGVLYDLLGRSQ HEDMRTVTVEGFMRRYGVDRAQAGRIGELAVRFYDQFEEPDEERRAENRMFLGWAAALHEIGLSISHSAYHKHSAYIASN ADMPGFSRTDQARLAALVLGHAGKLGKLSQTREVEWPLLFCLRLAALLCRRRADVGLPGISVAQVNNGYEARLPNEWVSN NPLTDYSLIQEAAEWEKVGIPYRVVYTDD
Specific function: Degradation of inorganic polyphosphates. Orthophosphate is released progressively from the ends of polyphosphate [H]
COG id: COG0248
COG function: function code FP; Exopolyphosphatase
Gene ontology:
Cell location: Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gppA/ppx family [H]
Homologues:
Organism=Escherichia coli, GI1788848, Length=498, Percent_Identity=38.7550200803213, Blast_Score=335, Evalue=5e-93, Organism=Escherichia coli, GI48994966, Length=496, Percent_Identity=36.2903225806452, Blast_Score=300, Evalue=2e-82,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022371 - InterPro: IPR003695 [H]
Pfam domain/function: PF02541 Ppx-GppA [H]
EC number: =3.6.1.11 [H]
Molecular weight: Translated: 55828; Mature: 55828
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESAYSMVTTPQLLAAVDLGSNSFRLIVGRVEETDAGSQIYQVDALREPVRLAAGLSRDK CCCCCCHHCCHHHHEEEECCCCCEEEEEEECCCCCCCCEEEEHHHHHHHHHHHHCCCHHH MLDRASQVRGWDALKRFGERLRDFHPDHVRAVATNTLRIAKNAGEFLGEAQAALGFPIEV HHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHEEHHHHHHHHHHHHHHCCCCEEE IAGREEARLIYAGAAHSVPASPGKRLVVDIGGGSTEFIIGSHYTPIKMESLYIGCVSHSR ECCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEEEEEEEECCCC AFFPAGNVDEYTMRQAELAAGREIQIISAEYKKTGWEQAIGSSGTARALAELVEANGFND EECCCCCCCHHHHHHHHHCCCCEEEEEECHHHHCCHHHHHCCCCHHHHHHHHHHHCCCCC AGVTHGISRGGLERLKRALIKAENVNRLKLVALKGDRIPVLAGGLSIMIAVFDELGVEYV CCHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEECHHHHHHHHHHHHCCEEE DTTDGALRLGVLYDLLGRSQHEDMRTVTVEGFMRRYGVDRAQAGRIGELAVRFYDQFEEP ECCCCHHHHHHHHHHHCCCCCCCHHEEHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHCCC DEERRAENRMFLGWAAALHEIGLSISHSAYHKHSAYIASNADMPGFSRTDQARLAALVLG CHHHHHHCCEEHHHHHHHHHHCCCCCCHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHH HAGKLGKLSQTREVEWPLLFCLRLAALLCRRRADVGLPGISVAQVNNGYEARLPNEWVSN CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCC NPLTDYSLIQEAAEWEKVGIPYRVVYTDD CCCCHHHHHHHHHHHHHCCCCEEEEEECC >Mature Secondary Structure MESAYSMVTTPQLLAAVDLGSNSFRLIVGRVEETDAGSQIYQVDALREPVRLAAGLSRDK CCCCCCHHCCHHHHEEEECCCCCEEEEEEECCCCCCCCEEEEHHHHHHHHHHHHCCCHHH MLDRASQVRGWDALKRFGERLRDFHPDHVRAVATNTLRIAKNAGEFLGEAQAALGFPIEV HHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHEEHHHHHHHHHHHHHHCCCCEEE IAGREEARLIYAGAAHSVPASPGKRLVVDIGGGSTEFIIGSHYTPIKMESLYIGCVSHSR ECCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEEEEEEEECCCC AFFPAGNVDEYTMRQAELAAGREIQIISAEYKKTGWEQAIGSSGTARALAELVEANGFND EECCCCCCCHHHHHHHHHCCCCEEEEEECHHHHCCHHHHHCCCCHHHHHHHHHHHCCCCC AGVTHGISRGGLERLKRALIKAENVNRLKLVALKGDRIPVLAGGLSIMIAVFDELGVEYV CCHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEECHHHHHHHHHHHHCCEEE DTTDGALRLGVLYDLLGRSQHEDMRTVTVEGFMRRYGVDRAQAGRIGELAVRFYDQFEEP ECCCCHHHHHHHHHHHCCCCCCCHHEEHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHCCC DEERRAENRMFLGWAAALHEIGLSISHSAYHKHSAYIASNADMPGFSRTDQARLAALVLG CHHHHHHCCEEHHHHHHHHHHCCCCCCHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHH HAGKLGKLSQTREVEWPLLFCLRLAALLCRRRADVGLPGISVAQVNNGYEARLPNEWVSN CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCC NPLTDYSLIQEAAEWEKVGIPYRVVYTDD CCCCHHHHHHHHHHHHHCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10382967; 10984043 [H]