| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is phoR [H]
Identifier: 91784527
GI number: 91784527
Start: 3514948
End: 3516261
Strand: Reverse
Name: phoR [H]
Synonym: Bxe_A1272
Alternate gene names: 91784527
Gene position: 3516261-3514948 (Counterclockwise)
Preceding gene: 91784528
Following gene: 91784525
Centisome position: 71.82
GC content: 62.1
Gene sequence:
>1314_bases ATGAACATCATCTGGGCGCGCTCCATCGTGTCGGTCGTGCTGCTGGCTGTTCTGTGCGTGGTGGTCGGCGCACTCGTGAA CGTCAAGGCAGCGCTCGTCCTCGCGATCGTCATGCTGCTCGCGCAGAGCGTTTTCAGCACTTTCCATAAACAGCGTCTGT GGCGTCTGCTCGACGCGCCGGTCTACGGCGAAGTGCCGAGCGCTCCCGGCATCTGGGGCGAAATCTACTACCGTTTGCAC AAGCTCGCGAAGCGCTGGCACGCCCAGGTGCGCCAGGTCGAGCAGCAGCATTCGCGTTTCATCCAAGCGATCCAGGCTTC GCCGAACGGCGTGGCGATGCTCGACGATCATGACCAGATCGAGTGGTGCAACGCCATCTCCGAACTCCATTTCGGGCTGG ATGCGAAGCGCGATCTGCGCCAGCACATCACGCATCTGGTGCGTCAGCCCGATTTCGTCCGTTACCTGAATTCGCATCGG TACGAAGAGATGCTGATCATGCGCGGCATGGGCGACAAGCGTCAGAACGTGCTCTCGGTGCAGGTGTTTCCGTACGGCGA AAACCGCAAACTGGTGCTTTCGCAGGACATCACCGAACTCGAACGGACCGACGCGATGCGGCGCGACTTCGTCGCGAATG TTTCGCATGAATTGAAGACGCCGCTCACGGTGCTCTCCGGTTTTCTGGAGACCATGCGCGAGTTGCCGCTGAGCGAAGGC GAACGTTCACGCTATCTGGAGTTGATGGAGCAGCAGGCTTCGCGCATGCGCCATATCGTCAGCGATCTGCTGGTGCTCGC CAAGCTGGAGGGCGACAACAAGCCGCCGAGCGATCAGATGATCGACATGCGTGCGGTGTTGCGGCATCTGCGTGACGACG CGCAGAGCCTGTCGAGCGATCATCACAAGATCGTGTTCGATGCCGACGAAGGGCTCACGGTCACCGGCGTCGAAACGGAA ATTCTCAGCGCATTCGGCAATCTCGTCACGAACGCGATCCGCTACACGCCGGACGGCGGCGCGATCCGGGTGTCGTGGCA CGCACAGGGCGGCCATGCGGTGTTTTCCGTGACGGACAGCGGACTGGGTATTCCCGCCGCGGACATTCCGCGGCTGACGG AGCGCTTCTATCGCGTCGATCGCAGCCGTTCACGCGATACCGGCGGCACGGGCCTCGGACTTGCGATCGTCAAACATGTG CTCCAGCGTCACGACGCACAGCTCGATGTGAAGAGCGAAGAGGGGCGCGGCAGCACGTTCACGGTGCGCTTTCCGGTGTA CCGCACCGCGCGTCGGCAACCGGCGCCGGTTTGA
Upstream 100 bases:
>100_bases CCGGGTACGTCATCTTCGCAACGCTTCTCGTCACCCTTCGCAATGTCAGGCGCCGCGATTCAGATTCCGGTGCATGGGTT TTTTCTTCGATCGCTAGACC
Downstream 100 bases:
>100_bases GCGCGAATGCATTGTTAGCATTGATTCGGCATGCTCGCGTAGCCCACCGTGAGTCGATTGACCGCATAATCGACTCAAAT CATGAGGCGATAGCGACTCC
Product: phosphate sensor signal transduction histidine kinase, PhoR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MNIIWARSIVSVVLLAVLCVVVGALVNVKAALVLAIVMLLAQSVFSTFHKQRLWRLLDAPVYGEVPSAPGIWGEIYYRLH KLAKRWHAQVRQVEQQHSRFIQAIQASPNGVAMLDDHDQIEWCNAISELHFGLDAKRDLRQHITHLVRQPDFVRYLNSHR YEEMLIMRGMGDKRQNVLSVQVFPYGENRKLVLSQDITELERTDAMRRDFVANVSHELKTPLTVLSGFLETMRELPLSEG ERSRYLELMEQQASRMRHIVSDLLVLAKLEGDNKPPSDQMIDMRAVLRHLRDDAQSLSSDHHKIVFDADEGLTVTGVETE ILSAFGNLVTNAIRYTPDGGAIRVSWHAQGGHAVFSVTDSGLGIPAADIPRLTERFYRVDRSRSRDTGGTGLGLAIVKHV LQRHDAQLDVKSEEGRGSTFTVRFPVYRTARRQPAPV
Sequences:
>Translated_437_residues MNIIWARSIVSVVLLAVLCVVVGALVNVKAALVLAIVMLLAQSVFSTFHKQRLWRLLDAPVYGEVPSAPGIWGEIYYRLH KLAKRWHAQVRQVEQQHSRFIQAIQASPNGVAMLDDHDQIEWCNAISELHFGLDAKRDLRQHITHLVRQPDFVRYLNSHR YEEMLIMRGMGDKRQNVLSVQVFPYGENRKLVLSQDITELERTDAMRRDFVANVSHELKTPLTVLSGFLETMRELPLSEG ERSRYLELMEQQASRMRHIVSDLLVLAKLEGDNKPPSDQMIDMRAVLRHLRDDAQSLSSDHHKIVFDADEGLTVTGVETE ILSAFGNLVTNAIRYTPDGGAIRVSWHAQGGHAVFSVTDSGLGIPAADIPRLTERFYRVDRSRSRDTGGTGLGLAIVKHV LQRHDAQLDVKSEEGRGSTFTVRFPVYRTARRQPAPV >Mature_437_residues MNIIWARSIVSVVLLAVLCVVVGALVNVKAALVLAIVMLLAQSVFSTFHKQRLWRLLDAPVYGEVPSAPGIWGEIYYRLH KLAKRWHAQVRQVEQQHSRFIQAIQASPNGVAMLDDHDQIEWCNAISELHFGLDAKRDLRQHITHLVRQPDFVRYLNSHR YEEMLIMRGMGDKRQNVLSVQVFPYGENRKLVLSQDITELERTDAMRRDFVANVSHELKTPLTVLSGFLETMRELPLSEG ERSRYLELMEQQASRMRHIVSDLLVLAKLEGDNKPPSDQMIDMRAVLRHLRDDAQSLSSDHHKIVFDADEGLTVTGVETE ILSAFGNLVTNAIRYTPDGGAIRVSWHAQGGHAVFSVTDSGLGIPAADIPRLTERFYRVDRSRSRDTGGTGLGLAIVKHV LQRHDAQLDVKSEEGRGSTFTVRFPVYRTARRQPAPV
Specific function: Member of the two-component regulatory system phoR/phoB involved in the phosphate regulon genes expression. PhoR may function as a membrane-associated protein kinase that phosphorylates phoB in response to environmental signals [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1786600, Length=421, Percent_Identity=36.104513064133, Blast_Score=269, Evalue=3e-73, Organism=Escherichia coli, GI145693157, Length=342, Percent_Identity=28.3625730994152, Blast_Score=125, Evalue=4e-30, Organism=Escherichia coli, GI1788393, Length=267, Percent_Identity=30.7116104868914, Blast_Score=118, Evalue=9e-28, Organism=Escherichia coli, GI48994928, Length=375, Percent_Identity=26.9333333333333, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1786783, Length=254, Percent_Identity=31.8897637795276, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1790436, Length=310, Percent_Identity=27.741935483871, Blast_Score=102, Evalue=6e-23, Organism=Escherichia coli, GI1790346, Length=248, Percent_Identity=29.8387096774194, Blast_Score=95, Evalue=9e-21, Organism=Escherichia coli, GI1790861, Length=216, Percent_Identity=30.0925925925926, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1789149, Length=226, Percent_Identity=31.858407079646, Blast_Score=93, Evalue=4e-20, Organism=Escherichia coli, GI1788713, Length=263, Percent_Identity=26.615969581749, Blast_Score=89, Evalue=6e-19, Organism=Escherichia coli, GI87081816, Length=248, Percent_Identity=28.2258064516129, Blast_Score=75, Evalue=9e-15, Organism=Escherichia coli, GI1787894, Length=224, Percent_Identity=25.8928571428571, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI87082128, Length=251, Percent_Identity=24.7011952191235, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI1788549, Length=393, Percent_Identity=22.64631043257, Blast_Score=72, Evalue=9e-14, Organism=Escherichia coli, GI1786912, Length=225, Percent_Identity=26.2222222222222, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1790551, Length=238, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1789808, Length=221, Percent_Identity=28.9592760180996, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1789403, Length=228, Percent_Identity=28.9473684210526, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR021766 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR014310 [H]
Pfam domain/function: PF11808 DUF3329; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 49412; Mature: 49412
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIIWARSIVSVVLLAVLCVVVGALVNVKAALVLAIVMLLAQSVFSTFHKQRLWRLLDAP CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VYGEVPSAPGIWGEIYYRLHKLAKRWHAQVRQVEQQHSRFIQAIQASPNGVAMLDDHDQI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHH EWCNAISELHFGLDAKRDLRQHITHLVRQPDFVRYLNSHRYEEMLIMRGMGDKRQNVLSV HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE QVFPYGENRKLVLSQDITELERTDAMRRDFVANVSHELKTPLTVLSGFLETMRELPLSEG EEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC ERSRYLELMEQQASRMRHIVSDLLVLAKLEGDNKPPSDQMIDMRAVLRHLRDDAQSLSSD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC HHKIVFDADEGLTVTGVETEILSAFGNLVTNAIRYTPDGGAIRVSWHAQGGHAVFSVTDS CCEEEEECCCCEEEECHHHHHHHHHHHHHHHHHEECCCCCEEEEEEECCCCEEEEEEECC GLGIPAADIPRLTERFYRVDRSRSRDTGGTGLGLAIVKHVLQRHDAQLDVKSEEGRGSTF CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCEE TVRFPVYRTARRQPAPV EEEECHHHHCCCCCCCC >Mature Secondary Structure MNIIWARSIVSVVLLAVLCVVVGALVNVKAALVLAIVMLLAQSVFSTFHKQRLWRLLDAP CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VYGEVPSAPGIWGEIYYRLHKLAKRWHAQVRQVEQQHSRFIQAIQASPNGVAMLDDHDQI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHH EWCNAISELHFGLDAKRDLRQHITHLVRQPDFVRYLNSHRYEEMLIMRGMGDKRQNVLSV HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE QVFPYGENRKLVLSQDITELERTDAMRRDFVANVSHELKTPLTVLSGFLETMRELPLSEG EEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC ERSRYLELMEQQASRMRHIVSDLLVLAKLEGDNKPPSDQMIDMRAVLRHLRDDAQSLSSD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC HHKIVFDADEGLTVTGVETEILSAFGNLVTNAIRYTPDGGAIRVSWHAQGGHAVFSVTDS CCEEEEECCCCEEEECHHHHHHHHHHHHHHHHHEECCCCCEEEEEEECCCCEEEEEEECC GLGIPAADIPRLTERFYRVDRSRSRDTGGTGLGLAIVKHVLQRHDAQLDVKSEEGRGSTF CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCEE TVRFPVYRTARRQPAPV EEEECHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2556368 [H]