| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91784494
Identifier: 91784494
GI number: 91784494
Start: 3486640
End: 3487089
Strand: Reverse
Name: 91784494
Synonym: Bxe_A1305
Alternate gene names: NA
Gene position: 3487089-3486640 (Counterclockwise)
Preceding gene: 91784495
Following gene: 91784491
Centisome position: 71.23
GC content: 64.89
Gene sequence:
>450_bases GTGAACGCGCGGGTCATCTCGTGCGGCATCGTGTTGCTTGACCCGGACGGGCGCGTGCTGCTTGCACACGCCACCGAGAC ATCGCACTGGGACATTCCGAAAGGGCACGGCGAAGCAGGCGAGGCGCCGCATGTCACGGCGCTGCGCGAGATGGTCGAGG AGACCGGTATCGCCATCGAGCCCGCGCGTCTCAAAGATCTTGGCCTGTTCGTCTACCGGCGCGACAAGGATCTGCATCTG TTCGGCGCGCGTGCCACTGCCGACGAACTCGACCTGAGCGTGTGCACCTGCACGTCGCTCTTTCCACGCCGCTCCGACGG CACGCTGATTCCGGAAATGGACGCCTACCGCTGGAGCGCGCCGGATGAAGTCGACAGGTATGCGAGCCGCAGTCTCGCGC GGCTCTTTCAGACCACGCTGTCGCTCGCGGAATTGCATCGGTCGCTATGA
Upstream 100 bases:
>100_bases AGGCGGTCATGGCGGCGCGCGTCCGCTTGCTGCCGGCGCGGCTCGACGCCCTGCGTGTGCGCTCGCGCTGGTGTCCGCGC TCGCGTGAAGCGGAGTCGCA
Downstream 100 bases:
>100_bases CGGCAAAGCCGGCGACCGCATCGGCCGCCTGCTGGCTCAGTCGAGTGCGCGGTCGTTGGGATGCGCGAACAGGGCGCGAT TCTGTTCCGAGAGCGGAAAA
Product: NUDIX family hydrolase
Products: NA
Alternate protein names: Nudix Hydrolase; Phosphohydrolase; NUDIX Family Hydrolase; NUDIX Domain Protein; Hydrolase Nudix Family
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MNARVISCGIVLLDPDGRVLLAHATETSHWDIPKGHGEAGEAPHVTALREMVEETGIAIEPARLKDLGLFVYRRDKDLHL FGARATADELDLSVCTCTSLFPRRSDGTLIPEMDAYRWSAPDEVDRYASRSLARLFQTTLSLAELHRSL
Sequences:
>Translated_149_residues MNARVISCGIVLLDPDGRVLLAHATETSHWDIPKGHGEAGEAPHVTALREMVEETGIAIEPARLKDLGLFVYRRDKDLHL FGARATADELDLSVCTCTSLFPRRSDGTLIPEMDAYRWSAPDEVDRYASRSLARLFQTTLSLAELHRSL >Mature_149_residues MNARVISCGIVLLDPDGRVLLAHATETSHWDIPKGHGEAGEAPHVTALREMVEETGIAIEPARLKDLGLFVYRRDKDLHL FGARATADELDLSVCTCTSLFPRRSDGTLIPEMDAYRWSAPDEVDRYASRSLARLFQTTLSLAELHRSL
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16557; Mature: 16557
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNARVISCGIVLLDPDGRVLLAHATETSHWDIPKGHGEAGEAPHVTALREMVEETGIAIE CCCEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEC PARLKDLGLFVYRRDKDLHLFGARATADELDLSVCTCTSLFPRRSDGTLIPEMDAYRWSA CCCHHCCEEEEEECCCCEEEEECCCCCCHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC PDEVDRYASRSLARLFQTTLSLAELHRSL CHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNARVISCGIVLLDPDGRVLLAHATETSHWDIPKGHGEAGEAPHVTALREMVEETGIAIE CCCEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEC PARLKDLGLFVYRRDKDLHLFGARATADELDLSVCTCTSLFPRRSDGTLIPEMDAYRWSA CCCHHCCEEEEEECCCCEEEEECCCCCCHHCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC PDEVDRYASRSLARLFQTTLSLAELHRSL CHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA