| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is yjiJ [C]
Identifier: 91784486
GI number: 91784486
Start: 3474170
End: 3475684
Strand: Reverse
Name: yjiJ [C]
Synonym: Bxe_A1313
Alternate gene names: 91784486
Gene position: 3475684-3474170 (Counterclockwise)
Preceding gene: 91784488
Following gene: 91784485
Centisome position: 70.99
GC content: 71.29
Gene sequence:
>1515_bases ATGAACCAGTTAGCCTCCCTCGCCCACGGTAGCCTTGCCGGCCGCCACGCCGCCCGCCGCGCCGCGCTTGCCTGCATGGT CACGCTGGCGGTTGCGCTCGGCATCGGGCGATTTGCGTTCACGCCGCTCCTGCCGCTGATGCTTCACGGCAGCGCATTCG GCCAGCCGCAGATCGACATTCAGCATGGCGGCTGGCTCGCGTCGTTCAATTACGCCGGGTATTTCGTCGGCGCGGTCGCC TGTGCGGCGCTGCGGATCGAACCGGCGCGCATGGTGCGCGCGGGGCTCGCCGCGACAGTGCTGCTGACGCTGGCGATGGG CGTGACGGGGCAGTTCTGGGTATGGGCCGCCGTGCGCTTCGTAGCCGGGGCGGTCAGTGCGATGACGTTCGTTTTCGCGT CGCAGTGGGGCTTGCGGCGGCTTGCCGAACTCGGCGCGCCTGAGTGGAGCGGGGTGATCTATACGGGGCCGGGCGCGGGG ATCGTCGGAACGGGCTTGTTGGTCACGGTCGCGGATGGGTATGGGCCCGCGATTGGGTGGGTCGGTTTTGGGCTCGTTGG CGCGGTTCTGTCGATTGCGGTTTGGCCGGTGTTTAGCGGTCGCGGAAATGGGGACGGTGGTCGCGTGGCGGGCTCCGATA CCGCGCCGGCCGCCACCAGGGAGGATGCAGATAGGCCGGCTGTCACCAAGGGCGCGGGCATCAGGAGTGTCGCCGCAGCC CACGCCACCGCCGCCCCCACCGCCCCCACCGCCCACGCCACCGCCACCGCCACCGCCACCGCCGCTACCGCTACCGCTAC CGCCCACGCCCACGCCCACGCCCACGCCGCCACGACAAGCGTCGACATTAGCGGCGCCGCCAGGACCCACACCGCCGCCA CGACCAGCGCTGGCACGACGCCCGCCGCCACCACGAACCCCGCCACCACGAACCCCGCCGATGCCTTCTGGCTAGTCCTC CTCTACGGCATCCCCGGTTTCGGCTACATCATCACCGCGACTTTCCTGCCGGTGATCGCGCGCCATGCGCTGCCCGGCTC ATCCTGGCCCGACCTGTTCTGGCCGATGTTCGGCGCGGCGCTGATCGTCGGCGCGCTGCTGGCGGCGCGTTTGCCGGCGC ATTGGGACAACCGTGCGCTGCTCGCCGGCTGCTATGTGCTGCAGGCGGCCGGCATCGCCCTCGGTATCGTCTGGCCGACG GCGGGCGGCTTTTCGCTCGGCAGCATCCTGATCGGCCTGCCGTTCACCGCGATCACCCTGTTCGCGATGCGCGAGGCGAG GCGGCTGCGCGGCAACAACGCTGCCGCGCTGATGGGTTATGCGACGGCGGCCTATGGCGTCGGACAGATCGCCGGTCCGC TGGTCGCCGCGCCGATCGCCGCGCAGAGCGGATCGTTTTCGCCGGCGCTGTGGCTGGCGGCGGCCGCATTGCTGGCGGGC GCGGCGGGGCTCGCCGTCGTCGCGCGCCTGCCGCCTGGCCGTGGCCGCGGCATGTCCGATTGCACCTGCGATTGA
Upstream 100 bases:
>100_bases GATGGGTGGTATCCGAATTATTCATTTTTCGTGATCGAAAGGTCAAGCTACCATGAATTCAGCTCTCCCATTCGTTGACT GAATCCACCGCCGCCTGCTC
Downstream 100 bases:
>100_bases GCGCAGACCGAACGCAGACCGAGCGCATAGCAACGCAACCGCCACCGGCGGCCCGCCCCCAAAAAAACAAATAACCGAAC GGCGCACTAAAATGACCGCT
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Family Transporter; Facilitator Superfamily Protein; MFS General Substrate Transporter; Facilitator Transporter Protein; Facilitator Superfamily Transporter; Permease Facilitator Superfamily
Number of amino acids: Translated: 504; Mature: 504
Protein sequence:
>504_residues MNQLASLAHGSLAGRHAARRAALACMVTLAVALGIGRFAFTPLLPLMLHGSAFGQPQIDIQHGGWLASFNYAGYFVGAVA CAALRIEPARMVRAGLAATVLLTLAMGVTGQFWVWAAVRFVAGAVSAMTFVFASQWGLRRLAELGAPEWSGVIYTGPGAG IVGTGLLVTVADGYGPAIGWVGFGLVGAVLSIAVWPVFSGRGNGDGGRVAGSDTAPAATREDADRPAVTKGAGIRSVAAA HATAAPTAPTAHATATATATAATATATAHAHAHAHAATTSVDISGAARTHTAATTSAGTTPAATTNPATTNPADAFWLVL LYGIPGFGYIITATFLPVIARHALPGSSWPDLFWPMFGAALIVGALLAARLPAHWDNRALLAGCYVLQAAGIALGIVWPT AGGFSLGSILIGLPFTAITLFAMREARRLRGNNAAALMGYATAAYGVGQIAGPLVAAPIAAQSGSFSPALWLAAAALLAG AAGLAVVARLPPGRGRGMSDCTCD
Sequences:
>Translated_504_residues MNQLASLAHGSLAGRHAARRAALACMVTLAVALGIGRFAFTPLLPLMLHGSAFGQPQIDIQHGGWLASFNYAGYFVGAVA CAALRIEPARMVRAGLAATVLLTLAMGVTGQFWVWAAVRFVAGAVSAMTFVFASQWGLRRLAELGAPEWSGVIYTGPGAG IVGTGLLVTVADGYGPAIGWVGFGLVGAVLSIAVWPVFSGRGNGDGGRVAGSDTAPAATREDADRPAVTKGAGIRSVAAA HATAAPTAPTAHATATATATAATATATAHAHAHAHAATTSVDISGAARTHTAATTSAGTTPAATTNPATTNPADAFWLVL LYGIPGFGYIITATFLPVIARHALPGSSWPDLFWPMFGAALIVGALLAARLPAHWDNRALLAGCYVLQAAGIALGIVWPT AGGFSLGSILIGLPFTAITLFAMREARRLRGNNAAALMGYATAAYGVGQIAGPLVAAPIAAQSGSFSPALWLAAAALLAG AAGLAVVARLPPGRGRGMSDCTCD >Mature_504_residues MNQLASLAHGSLAGRHAARRAALACMVTLAVALGIGRFAFTPLLPLMLHGSAFGQPQIDIQHGGWLASFNYAGYFVGAVA CAALRIEPARMVRAGLAATVLLTLAMGVTGQFWVWAAVRFVAGAVSAMTFVFASQWGLRRLAELGAPEWSGVIYTGPGAG IVGTGLLVTVADGYGPAIGWVGFGLVGAVLSIAVWPVFSGRGNGDGGRVAGSDTAPAATREDADRPAVTKGAGIRSVAAA HATAAPTAPTAHATATATATAATATATAHAHAHAHAATTSVDISGAARTHTAATTSAGTTPAATTNPATTNPADAFWLVL LYGIPGFGYIITATFLPVIARHALPGSSWPDLFWPMFGAALIVGALLAARLPAHWDNRALLAGCYVLQAAGIALGIVWPT AGGFSLGSILIGLPFTAITLFAMREARRLRGNNAAALMGYATAAYGVGQIAGPLVAAPIAAQSGSFSPALWLAAAALLAG AAGLAVVARLPPGRGRGMSDCTCD
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50682; Mature: 50682
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQLASLAHGSLAGRHAARRAALACMVTLAVALGIGRFAFTPLLPLMLHGSAFGQPQIDI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE QHGGWLASFNYAGYFVGAVACAALRIEPARMVRAGLAATVLLTLAMGVTGQFWVWAAVRF ECCCEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH VAGAVSAMTFVFASQWGLRRLAELGAPEWSGVIYTGPGAGIVGTGLLVTVADGYGPAIGW HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHCCEEEEEECCCCCHHHH VGFGLVGAVLSIAVWPVFSGRGNGDGGRVAGSDTAPAATREDADRPAVTKGAGIRSVAAA HHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH HATAAPTAPTAHATATATATAATATATAHAHAHAHAATTSVDISGAARTHTAATTSAGTT HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCC PAATTNPATTNPADAFWLVLLYGIPGFGYIITATFLPVIARHALPGSSWPDLFWPMFGAA CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH LIVGALLAARLPAHWDNRALLAGCYVLQAAGIALGIVWPTAGGFSLGSILIGLPFTAITL HHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHCHHHHHHH FAMREARRLRGNNAAALMGYATAAYGVGQIAGPLVAAPIAAQSGSFSPALWLAAAALLAG HHHHHHHHHCCCCCEEEHHHHHHHHCHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHH AAGLAVVARLPPGRGRGMSDCTCD HHHHHEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MNQLASLAHGSLAGRHAARRAALACMVTLAVALGIGRFAFTPLLPLMLHGSAFGQPQIDI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE QHGGWLASFNYAGYFVGAVACAALRIEPARMVRAGLAATVLLTLAMGVTGQFWVWAAVRF ECCCEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH VAGAVSAMTFVFASQWGLRRLAELGAPEWSGVIYTGPGAGIVGTGLLVTVADGYGPAIGW HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHCCEEEEEECCCCCHHHH VGFGLVGAVLSIAVWPVFSGRGNGDGGRVAGSDTAPAATREDADRPAVTKGAGIRSVAAA HHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH HATAAPTAPTAHATATATATAATATATAHAHAHAHAATTSVDISGAARTHTAATTSAGTT HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCC PAATTNPATTNPADAFWLVLLYGIPGFGYIITATFLPVIARHALPGSSWPDLFWPMFGAA CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH LIVGALLAARLPAHWDNRALLAGCYVLQAAGIALGIVWPTAGGFSLGSILIGLPFTAITL HHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHCHHHHHHH FAMREARRLRGNNAAALMGYATAAYGVGQIAGPLVAAPIAAQSGSFSPALWLAAAALLAG HHHHHHHHHCCCCCEEEHHHHHHHHCHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHH AAGLAVVARLPPGRGRGMSDCTCD HHHHHEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA