| Definition | Burkholderia xenovorans LB400 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_007951 |
| Length | 4,895,836 |
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The map label for this gene is 91784435
Identifier: 91784435
GI number: 91784435
Start: 3409347
End: 3409751
Strand: Reverse
Name: 91784435
Synonym: Bxe_A1364
Alternate gene names: NA
Gene position: 3409751-3409347 (Counterclockwise)
Preceding gene: 91784436
Following gene: 91784433
Centisome position: 69.65
GC content: 66.17
Gene sequence:
>405_bases ATGTCGATGCCGATCCGCTGGGGCGACATGGACGCGTTCGGCCATGTGAACAACACGGTCTATTTCCGCTACATGGAACA GGTGCGGATTTCCTGGTTCGAGCAGTTGGGTCTGGCCGGCGGCAATGCCGACGGGCAGGGGCCGGTGATCGTCAATGCAT CGATGGAGTTTCTCAAGCAGCTGCATTATCCCGGCGACGTGATCGGCCGGATGACGGTGGCCACGCCCGGCCGCAGCAGC TTCGACACGGGCTTCGAGCTCGTGCGCGCCGACGATCCGGATACCGTGTATGCGCGCGGCGCCGCGCGCTGCGTGTGGAT CGATTACGCGGCCGGCAAGTCGGTGCCGGTGCCCGACCTGCTGCGCGCAACCATCGAGCGCGCGGCGCTGGTCAAGGCGG CCTGA
Upstream 100 bases:
>100_bases TATGTTGCGGTCTATCCCTGCGCCGGCTCGCGTGCCGGCTCCAACCTGGTTTAATCCGAATAAAAGAAGTGCGATGAGCG ATTTTCACGCTGTTTTTGAG
Downstream 100 bases:
>100_bases GCGGCGGCAACAGGGCGGCGGGCCGCGGCGCTCATCTGCACGCGTCTTTCTTCAATGCCCGAGCAGGCGCTGCAACAGCT CCGTCGCGTTGCCCGTATCG
Product: putative thioesterase
Products: NA
Alternate protein names: Thioesterase; Thioesterase Superfamily; Thioesterase Family Protein; Thioesterase Family Protein Domain Protein; Thiesterase
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MSMPIRWGDMDAFGHVNNTVYFRYMEQVRISWFEQLGLAGGNADGQGPVIVNASMEFLKQLHYPGDVIGRMTVATPGRSS FDTGFELVRADDPDTVYARGAARCVWIDYAAGKSVPVPDLLRATIERAALVKAA
Sequences:
>Translated_134_residues MSMPIRWGDMDAFGHVNNTVYFRYMEQVRISWFEQLGLAGGNADGQGPVIVNASMEFLKQLHYPGDVIGRMTVATPGRSS FDTGFELVRADDPDTVYARGAARCVWIDYAAGKSVPVPDLLRATIERAALVKAA >Mature_133_residues SMPIRWGDMDAFGHVNNTVYFRYMEQVRISWFEQLGLAGGNADGQGPVIVNASMEFLKQLHYPGDVIGRMTVATPGRSSF DTGFELVRADDPDTVYARGAARCVWIDYAAGKSVPVPDLLRATIERAALVKAA
Specific function: Unknown
COG id: COG0824
COG function: function code R; Predicted thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14713; Mature: 14582
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMPIRWGDMDAFGHVNNTVYFRYMEQVRISWFEQLGLAGGNADGQGPVIVNASMEFLKQ CCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHHH LHYPGDVIGRMTVATPGRSSFDTGFELVRADDPDTVYARGAARCVWIDYAAGKSVPVPDL HCCCCHHHCEEEEECCCCCCCCCCEEEEECCCCCEEEECCCEEEEEEEECCCCCCCCHHH LRATIERAALVKAA HHHHHHHHHHHCCC >Mature Secondary Structure SMPIRWGDMDAFGHVNNTVYFRYMEQVRISWFEQLGLAGGNADGQGPVIVNASMEFLKQ CCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHHH LHYPGDVIGRMTVATPGRSSFDTGFELVRADDPDTVYARGAARCVWIDYAAGKSVPVPDL HCCCCHHHCEEEEECCCCCCCCCCEEEEECCCCCEEEECCCEEEEEEEECCCCCCCCHHH LRATIERAALVKAA HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA