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The map label for this gene is yoaB [C]

Identifier: 91784430

GI number: 91784430

Start: 3405478

End: 3405879

Strand: Reverse

Name: yoaB [C]

Synonym: Bxe_A1369

Alternate gene names: 91784430

Gene position: 3405879-3405478 (Counterclockwise)

Preceding gene: 91784431

Following gene: 91784429

Centisome position: 69.57

GC content: 60.7

Gene sequence:

>402_bases
ATGCGGAACGCATCTACGATCAACTTTCAACCAACTTCAGGATCCTTCATGGCAGTCATTCGTCACCACGTCGGCAAGCG
CCTCTCGGAAATCGCCGTTCACAACGGCACGGTGTATCTCGCGGGCCAGATCGCTGAAGACGCGGATCAGGACATCACGG
GGCAGACGCGCGAAGTGCTGGCCCACATCGACCGTCTGCTGGGCGAAGTGAACAGCGACAAGTCGCATTTGCTGTCGGTG
CAGATCTTCATCTCGGACATGGCGCATTTTGCCGGCATGAACGCCGTGTGGGACGAGTGGGTTGCACAAGGCGCCACGCC
GCCGCGCGCTACGGTCGAAGCGAAGCTCGCCAATCCGAAGTGCCTCGTCGAAGTCGTCGTGGTCGCGGCGCAGCGCAGCT
AA

Upstream 100 bases:

>100_bases
TGTCGGCCGACCAGATCGACATTGCAAGGCAGTTCTTTATCGGCCCGGCCGCCGACGCGTCATAATATGCAGTTCCGCCC
TGCGCCCTTGACGGAGCGCG

Downstream 100 bases:

>100_bases
GCCAGCCACATGGGTTGTTGAAATTCCGTTGATTCGTCCGGCCCGGTGGGCCACCGCACCATGAATACCGAAATCGTTAC
GAGCACGCCGAAGCCCCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MRNASTINFQPTSGSFMAVIRHHVGKRLSEIAVHNGTVYLAGQIAEDADQDITGQTREVLAHIDRLLGEVNSDKSHLLSV
QIFISDMAHFAGMNAVWDEWVAQGATPPRATVEAKLANPKCLVEVVVVAAQRS

Sequences:

>Translated_133_residues
MRNASTINFQPTSGSFMAVIRHHVGKRLSEIAVHNGTVYLAGQIAEDADQDITGQTREVLAHIDRLLGEVNSDKSHLLSV
QIFISDMAHFAGMNAVWDEWVAQGATPPRATVEAKLANPKCLVEVVVVAAQRS
>Mature_133_residues
MRNASTINFQPTSGSFMAVIRHHVGKRLSEIAVHNGTVYLAGQIAEDADQDITGQTREVLAHIDRLLGEVNSDKSHLLSV
QIFISDMAHFAGMNAVWDEWVAQGATPPRATVEAKLANPKCLVEVVVVAAQRS

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI87081979, Length=114, Percent_Identity=42.9824561403509, Blast_Score=96, Evalue=7e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 14446; Mature: 14446

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNASTINFQPTSGSFMAVIRHHVGKRLSEIAVHNGTVYLAGQIAEDADQDITGQTREVL
CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHH
AHIDRLLGEVNSDKSHLLSVQIFISDMAHFAGMNAVWDEWVAQGATPPRATVEAKLANPK
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEECCCCH
CLVEVVVVAAQRS
HHHHHHHHHHCCC
>Mature Secondary Structure
MRNASTINFQPTSGSFMAVIRHHVGKRLSEIAVHNGTVYLAGQIAEDADQDITGQTREVL
CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHH
AHIDRLLGEVNSDKSHLLSVQIFISDMAHFAGMNAVWDEWVAQGATPPRATVEAKLANPK
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEECCCCH
CLVEVVVVAAQRS
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA